RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SEC63Q9UGP8 760 aaKnown RBP17.05■□□□□ 0.32
EPHB4-206ENST00000487222 PLCH2O75038 1416 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 ATP10BO94823 1461 aa17.05■□□□□ 0.32
EPHB4-206ENST00000487222 GOLGA8AA7E2F4 631 aa17.04■□□□□ 0.32
EPHB4-206ENST00000487222 HSP90AB3PQ58FF7 597 aa17.04■□□□□ 0.32
EPHB4-206ENST00000487222 ZSCAN29Q8IWY8 852 aaPredicted RBP17.04■□□□□ 0.32
EPHB4-206ENST00000487222 TRMT1Q9NXH9 659 aaKnown RBP17.04■□□□□ 0.32
EPHB4-206ENST00000487222 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
EPHB4-206ENST00000487222 RBM5P52756 815 aaKnown RBP eCLIP17.04■□□□□ 0.32
EPHB4-206ENST00000487222 SSRP1Q08945 709 aaKnown RBP17.04■□□□□ 0.32
EPHB4-206ENST00000487222 LRSAM1Q6UWE0 723 aa17.04■□□□□ 0.32
EPHB4-206ENST00000487222 UGGT2Q9NYU1 1516 aa17.04■□□□□ 0.32
EPHB4-206ENST00000487222 RBM27Q9P2N5 1060 aaKnown RBP17.04■□□□□ 0.32
EPHB4-206ENST00000487222 ZNF652Q9Y2D9 606 aa17.04■□□□□ 0.32
EPHB4-206ENST00000487222 IFIT3O14879 490 aaKnown RBP17.04■□□□□ 0.32
EPHB4-206ENST00000487222 SDSP20132 328 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 ACEP12821 1306 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
EPHB4-206ENST00000487222 PRIMPOLQ96LW4 560 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 TSG101Q99816 390 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
EPHB4-206ENST00000487222 MAP3K2Q9Y2U5 619 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 RAPGEF6Q8TEU7 1601 aa17.03■□□□□ 0.32
EPHB4-206ENST00000487222 GOLGA6L9A6NEM1 432 aa17.02■□□□□ 0.32
EPHB4-206ENST00000487222 FGFR1OPO95684 399 aaKnown RBP17.02■□□□□ 0.32
EPHB4-206ENST00000487222 CACNA2D4Q7Z3S7 1137 aa17.02■□□□□ 0.32
EPHB4-206ENST00000487222 RAB34Q9BZG1 259 aa17.02■□□□□ 0.32
EPHB4-206ENST00000487222 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
EPHB4-206ENST00000487222 ZSCAN22P10073 491 aaPredicted RBP17.02■□□□□ 0.32
EPHB4-206ENST00000487222 SLC5A1P13866 664 aa17.02■□□□□ 0.32
EPHB4-206ENST00000487222 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
EPHB4-206ENST00000487222 SNX21Q969T3 373 aa17.02■□□□□ 0.32
EPHB4-206ENST00000487222 ZSCAN16Q9H4T2 348 aaPredicted RBP17.02■□□□□ 0.32
EPHB4-206ENST00000487222 FAM83GA6ND36 823 aa17.02■□□□□ 0.31
EPHB4-206ENST00000487222 YEATS4O95619 227 aa17.02■□□□□ 0.31
EPHB4-206ENST00000487222 ANAPC15P60006 121 aa17.02■□□□□ 0.31
EPHB4-206ENST00000487222 TMC6Q7Z403 805 aa17.02■□□□□ 0.31
EPHB4-206ENST00000487222 PI4KAP2A4QPH2 592 aa17.02■□□□□ 0.31
EPHB4-206ENST00000487222 PI4KAP1Q8N8J0 262 aa17.02■□□□□ 0.31
EPHB4-206ENST00000487222 RHPN1Q8TCX5 695 aa17.02■□□□□ 0.31
EPHB4-206ENST00000487222 DYNC1I1O14576 645 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 SHTN1A0MZ66 631 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 ANKRD62A6NC57 917 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 RANBP6O60518 1105 aaKnown RBP17.01■□□□□ 0.31
EPHB4-206ENST00000487222 USO1O60763 962 aaKnown RBP17.01■□□□□ 0.31
EPHB4-206ENST00000487222 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
EPHB4-206ENST00000487222 IARSP41252 1262 aaKnown RBP17.01■□□□□ 0.31
EPHB4-206ENST00000487222 ORC3Q9UBD5 711 aaPredicted RBP17.01■□□□□ 0.31
EPHB4-206ENST00000487222 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 VPS36Q86VN1 386 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 UBE2Q2Q8WVN8 375 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 NUP160Q12769 1436 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 GOLIM4O00461 696 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
EPHB4-206ENST00000487222 PAFAH1B1P43034 410 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 ANKRD44Q8N8A2 993 aa17.01■□□□□ 0.31
EPHB4-206ENST00000487222 NUP88Q99567 741 aaPredicted RBP17.01■□□□□ 0.31
EPHB4-206ENST00000487222 BIN1O00499 593 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 DUOX2Q9NRD8 1548 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 CCDC194A0A1B0GVG4 234 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 SF3B2Q13435 895 aaKnown RBP17■□□□□ 0.31
EPHB4-206ENST00000487222 KRT28Q7Z3Y7 464 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 POTEB2H3BUK9 544 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 CLCN1P35523 988 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 C8orf34Q49A92 452 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
EPHB4-206ENST00000487222 NUP153P49790 1475 aaKnown RBP17■□□□□ 0.31
EPHB4-206ENST00000487222 PDE1AP54750 535 aa17■□□□□ 0.31
EPHB4-206ENST00000487222 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
EPHB4-206ENST00000487222 TTF1Q15361 905 aaPredicted RBP16.99■□□□□ 0.31
EPHB4-206ENST00000487222 CPLX3Q8WVH0 158 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 TNRQ92752 1358 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 KIF20AO95235 890 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 XRCC6P12956 609 aaKnown RBP eCLIP16.99■□□□□ 0.31
EPHB4-206ENST00000487222 CETN2P41208 172 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 CATIPQ7Z7H3 387 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 CCDC150Q8NCX0 1101 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 MEIS3Q99687 375 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 PLCD4Q9BRC7 762 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 PAXBP1Q9Y5B6 917 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 ASXL1Q8IXJ9 1541 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
EPHB4-206ENST00000487222 NLRP5P59047 1200 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 TMEM266Q2M3C6 531 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 CCDC102BQ68D86 513 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 PRDM10Q9NQV6 1147 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 EZRP15311 586 aaKnown RBP16.98■□□□□ 0.31
EPHB4-206ENST00000487222 GIMAP6Q6P9H5 292 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 LUZP1Q86V48 1076 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 DZIP1Q86YF9 867 aaKnown RBP16.98■□□□□ 0.31
EPHB4-206ENST00000487222 PYM1Q9BRP8 204 aaKnown RBP16.98■□□□□ 0.31
EPHB4-206ENST00000487222 ESYT1Q9BSJ8 1104 aa16.98■□□□□ 0.31
EPHB4-206ENST00000487222 ZNF444Q8N0Y2 327 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms