RNA–Protein interactions for RNA: ENST00000486360.1

PPFIA4-205, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 4,547 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-205ENST00000486360 TOM1O60784 492 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 HOXB7P09629 217 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
PPFIA4-205ENST00000486360 HMGB2P26583 209 aaKnown RBP18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 FERMT3Q86UX7 667 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 CLTCL1P53675 1640 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 OLFM4Q6UX06 510 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 SPATA32Q96LK8 384 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 FAM135BQ49AJ0 1406 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 CFAP45Q9UL16 551 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 KDM2BQ8NHM5 1336 aa18.34■□□□□ 0.53
PPFIA4-205ENST00000486360 PA2G4Q9UQ80 394 aaKnown RBP18.33■□□□□ 0.53
PPFIA4-205ENST00000486360 HMGB1P09429 215 aaKnown RBP18.33■□□□□ 0.53
PPFIA4-205ENST00000486360 SSFA2P28290 1259 aa18.33■□□□□ 0.53
PPFIA4-205ENST00000486360 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.53
PPFIA4-205ENST00000486360 ARID3AQ99856 593 aa18.33■□□□□ 0.53
PPFIA4-205ENST00000486360 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.33■□□□□ 0.53
PPFIA4-205ENST00000486360 ATP7BP35670 1465 aa18.33■□□□□ 0.52
PPFIA4-205ENST00000486360 PLEKHM2Q8IWE5 1019 aa18.33■□□□□ 0.52
PPFIA4-205ENST00000486360 NAPBQ9H115 298 aa18.33■□□□□ 0.52
PPFIA4-205ENST00000486360 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.52
PPFIA4-205ENST00000486360 ESYT1Q9BSJ8 1104 aa18.33■□□□□ 0.52
PPFIA4-205ENST00000486360 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
PPFIA4-205ENST00000486360 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 TNPO1Q92973 898 aaKnown RBP18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 GRPEL1Q9HAV7 217 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 BRPF3Q9ULD4 1205 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 AATKQ6ZMQ8 1374 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 DDB1Q16531 1140 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 LRRIQ1Q96JM4 1722 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 CCDC192P0DO97 292 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 TRIM5Q9C035 493 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 TNMDQ9H2S6 317 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 CCDC39Q9UFE4 941 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
PPFIA4-205ENST00000486360 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
PPFIA4-205ENST00000486360 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
PPFIA4-205ENST00000486360 TCEAL9Q9UHQ7 104 aa18.31■□□□□ 0.52
PPFIA4-205ENST00000486360 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
PPFIA4-205ENST00000486360 NLRP1Q9C000 1473 aa18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 TRPM1Q7Z4N2 1603 aa18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 LARP6Q9BRS8 491 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 UBAP1LF5GYI3 381 aa18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 ZNF213O14771 459 aa18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 PCMTD1Q96MG8 357 aaPredicted RBP18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 CCDC173Q0VFZ6 552 aa18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 SF3B2Q13435 895 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 TRMT2AQ8IZ69 625 aaKnown RBP18.3■□□□□ 0.52
PPFIA4-205ENST00000486360 IL15P40933 162 aaPredicted RBP18.29■□□□□ 0.52
PPFIA4-205ENST00000486360 ZNF592Q92610 1267 aa18.29■□□□□ 0.52
PPFIA4-205ENST00000486360 ACSBG1Q96GR2 724 aa18.29■□□□□ 0.52
PPFIA4-205ENST00000486360 KIAA0232Q92628 1395 aa18.29■□□□□ 0.52
PPFIA4-205ENST00000486360 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
PPFIA4-205ENST00000486360 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
PPFIA4-205ENST00000486360 MINDY4BA8MYZ0 360 aa18.29■□□□□ 0.52
PPFIA4-205ENST00000486360 ABCA9Q8IUA7 1624 aa18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 PRR36Q9H6K5 1346 aa18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 IPO7O95373 1038 aaKnown RBP18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 SEC24BO95487 1268 aa18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 ATP2B2Q01814 1243 aa18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 HMG20BQ9P0W2 317 aa18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 TTC41PQ6P2S7 1318 aa18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 BTG4Q9NY30 223 aa18.28■□□□□ 0.52
PPFIA4-205ENST00000486360 TXLNAP40222 546 aa18.27■□□□□ 0.52
PPFIA4-205ENST00000486360 ANAPC15P60006 121 aa18.27■□□□□ 0.52
PPFIA4-205ENST00000486360 USP19O94966 1318 aa18.27■□□□□ 0.52
PPFIA4-205ENST00000486360 ATP6V1AP38606 617 aa18.27■□□□□ 0.52
PPFIA4-205ENST00000486360 NUP62CLQ9H1M0 184 aa18.27■□□□□ 0.51
PPFIA4-205ENST00000486360 ANKIB1Q9P2G1 1089 aa18.27■□□□□ 0.51
PPFIA4-205ENST00000486360 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 ATP2B3Q16720 1220 aa18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 WASF1Q92558 559 aa18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 SMARCC1Q92922 1105 aaPredicted RBP18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 IL27Q8NEV9 243 aa18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 HMGN5P82970 282 aaKnown RBP18.26■□□□□ 0.51
PPFIA4-205ENST00000486360 IL17REQ8NFR9 667 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 TMX3Q96JJ7 454 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 NEK1Q96PY6 1258 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 SCAND2PQ9GZW5 306 aaPredicted RBP18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 USP6P35125 1406 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 SNX21Q969T3 373 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 SLAIN2Q9P270 581 aa18.25■□□□□ 0.51
PPFIA4-205ENST00000486360 EIF4A1P60842 406 aaKnown RBP18.24■□□□□ 0.51
PPFIA4-205ENST00000486360 CCDC152Q4G0S7 254 aa18.24■□□□□ 0.51
PPFIA4-205ENST00000486360 UQCRFS1P1P0C7P4 283 aa18.24■□□□□ 0.51
PPFIA4-205ENST00000486360 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
PPFIA4-205ENST00000486360 BICC1Q9H694 974 aaKnown RBP18.24■□□□□ 0.51
PPFIA4-205ENST00000486360 NOL7Q9UMY1 257 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms