RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 NCOA3Q9Y6Q9 1424 aa9.94□□□□□ -0.82
TMEM39A-209ENST00000486235 RXRBP28702 533 aa9.94□□□□□ -0.82
TMEM39A-209ENST00000486235 TPRNQ4KMQ1 711 aa9.94□□□□□ -0.82
TMEM39A-209ENST00000486235 BRINP3Q76B58 766 aa9.94□□□□□ -0.82
TMEM39A-209ENST00000486235 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.93□□□□□ -0.82
TMEM39A-209ENST00000486235 PTSQ03393 145 aa9.93□□□□□ -0.82
TMEM39A-209ENST00000486235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.93□□□□□ -0.82
TMEM39A-209ENST00000486235 AMOTL2Q9Y2J4 779 aa9.93□□□□□ -0.82
TMEM39A-209ENST00000486235 PTPRUQ92729 1446 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 AFF2P51816 1311 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 NR6A1Q15406 480 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 GPKOWQ92917 476 aaPredicted RBP eCLIP9.92□□□□□ -0.823e-8■■■■■ 71.9
TMEM39A-209ENST00000486235 AGBL1Q96MI9 1066 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 CNTNAP3BQ96NU0 1288 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 KCTD15Q96SI1 283 aaPredicted RBP9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 CNTNAP3Q9BZ76 1288 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 SHPRHQ149N8 1683 aa9.92□□□□□ -0.82
TMEM39A-209ENST00000486235 PIK3R4Q99570 1358 aa9.91□□□□□ -0.82
TMEM39A-209ENST00000486235 KRT76Q01546 638 aa9.91□□□□□ -0.82
TMEM39A-209ENST00000486235 PDXDC2PQ6P474 469 aa9.91□□□□□ -0.82
TMEM39A-209ENST00000486235 ZBTB33Q86T24 672 aa9.91□□□□□ -0.82
TMEM39A-209ENST00000486235 FKBPLQ9UIM3 349 aa9.91□□□□□ -0.82
TMEM39A-209ENST00000486235 DIP2AQ14689 1571 aa9.91□□□□□ -0.82
TMEM39A-209ENST00000486235 PROCA1Q8NCQ7 364 aaPredicted RBP9.9□□□□□ -0.82
TMEM39A-209ENST00000486235 DDX17Q92841 729 aaKnown RBP9.9□□□□□ -0.82
TMEM39A-209ENST00000486235 SLC10A4Q96EP9 437 aa9.9□□□□□ -0.82
TMEM39A-209ENST00000486235 TRPM2O94759 1503 aa9.9□□□□□ -0.82
TMEM39A-209ENST00000486235 ASXL1Q8IXJ9 1541 aa9.89□□□□□ -0.83
TMEM39A-209ENST00000486235 RELBQ01201 579 aa9.89□□□□□ -0.83
TMEM39A-209ENST00000486235 Q6ZVU0 165 aa9.89□□□□□ -0.83
TMEM39A-209ENST00000486235 C8orf37Q96NL8 207 aa9.89□□□□□ -0.83
TMEM39A-209ENST00000486235 E9PCH4 1651 aa9.89□□□□□ -0.83
TMEM39A-209ENST00000486235 UNC13BO14795 1591 aa9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 CDK12Q9NYV4 1490 aaPredicted RBP9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 SPINT1O43278 529 aa9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 RAB15P59190 212 aa9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 CCDC155Q8N6L0 562 aa9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 RGS12O14924 1447 aa9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 MST1RQ04912 1400 aa9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 SETD5Q9C0A6 1442 aa9.88□□□□□ -0.83
TMEM39A-209ENST00000486235 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-209ENST00000486235 COL25A1Q9BXS0 654 aaPredicted RBP9.87□□□□□ -0.83
TMEM39A-209ENST00000486235 QTRT2Q9H974 415 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-209ENST00000486235 DCCP43146 1447 aa9.87□□□□□ -0.83
TMEM39A-209ENST00000486235 NUP155O75694 1391 aa9.87□□□□□ -0.83
TMEM39A-209ENST00000486235 AP1G2O75843 785 aa9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 RBM6P78332 1123 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 SKIV2LQ15477 1246 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 ZNF326Q5BKZ1 582 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 INTS6LQ5JSJ4 861 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 LRRC59Q96AG4 307 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 INSM2Q96T92 566 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 OCSTAMPQ9BR26 566 aa9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 ZNF395Q9H8N7 513 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 PNPLA6Q8IY17 1366 aa9.86□□□□□ -0.83
TMEM39A-209ENST00000486235 ITGAEP38570 1179 aa9.85□□□□□ -0.83
TMEM39A-209ENST00000486235 VWA5B2Q8N398 1253 aa9.85□□□□□ -0.83
TMEM39A-209ENST00000486235 GPBP1L1Q9HC44 474 aaPredicted RBP9.85□□□□□ -0.83
TMEM39A-209ENST00000486235 METP08581 1390 aa9.85□□□□□ -0.83
TMEM39A-209ENST00000486235 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
TMEM39A-209ENST00000486235 XRN1Q8IZH2 1706 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-209ENST00000486235 DHX9Q08211 1270 aaKnown RBP9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 RNFT1Q5M7Z0 435 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 KCTD17Q8N5Z5 321 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 EPS8L1Q8TE68 723 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 NGLY1Q96IV0 654 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 POLMQ9NP87 494 aaPredicted RBP9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 TMPRSS4Q9NRS4 437 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 NHSL1Q5SYE7 1610 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 NRXN3Q9Y4C0 1643 aa9.84□□□□□ -0.83
TMEM39A-209ENST00000486235 ADGRL3Q9HAR2 1447 aa9.83□□□□□ -0.84
TMEM39A-209ENST00000486235 CDC14CA4D256 554 aa9.83□□□□□ -0.84
TMEM39A-209ENST00000486235 PTK2Q05397 1052 aa9.83□□□□□ -0.84
TMEM39A-209ENST00000486235 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
TMEM39A-209ENST00000486235 CDV3Q9UKY7 258 aaKnown RBP9.83□□□□□ -0.84
TMEM39A-209ENST00000486235 SETBP1Q9Y6X0 1596 aa9.83□□□□□ -0.84
TMEM39A-209ENST00000486235 SLC35F4A4IF30 521 aa9.82□□□□□ -0.84
TMEM39A-209ENST00000486235 GSK3AP49840 483 aa9.82□□□□□ -0.84
TMEM39A-209ENST00000486235 KCNMA1Q12791 1236 aa9.82□□□□□ -0.84
TMEM39A-209ENST00000486235 ADAMTS8Q9UP79 889 aa9.82□□□□□ -0.84
TMEM39A-209ENST00000486235 ROCK1Q13464 1354 aa9.82□□□□□ -0.84
TMEM39A-209ENST00000486235 SH3D19Q5HYK7 790 aa9.81□□□□□ -0.84
TMEM39A-209ENST00000486235 KDM4CQ9H3R0 1056 aa9.81□□□□□ -0.84
TMEM39A-209ENST00000486235 USP21Q9UK80 565 aa9.81□□□□□ -0.84
TMEM39A-209ENST00000486235 C1orf167Q5SNV9 1468 aa9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 ATAD2Q6PL18 1390 aa9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 ITGA6P23229 1130 aa9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 NANOS1Q8WY41 292 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 ORAI2Q96SN7 254 aa9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 ZC3H4Q9UPT8 1303 aaKnown RBP9.8□□□□□ -0.84
TMEM39A-209ENST00000486235 NALCNQ8IZF0 1738 aa9.79□□□□□ -0.84
TMEM39A-209ENST00000486235 ZNF784Q8NCA9 323 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-209ENST00000486235 HMX1Q9NP08 348 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-209ENST00000486235 TRPC5Q9UL62 973 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-209ENST00000486235 ADD1P35611 737 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms