RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 ERFEQ4G0M1 354 aa18.14■□□□□ 0.49
SCAF4-206ENST00000485790 NBPF10Q6P3W6 841 aaKnown RBP18.14■□□□□ 0.49
SCAF4-206ENST00000485790 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
SCAF4-206ENST00000485790 SMC1BQ8NDV3 1235 aa18.14■□□□□ 0.49
SCAF4-206ENST00000485790 PLEKHF1Q96S99 279 aa18.14■□□□□ 0.49
SCAF4-206ENST00000485790 NPR1P16066 1061 aa18.13■□□□□ 0.49
SCAF4-206ENST00000485790 ERVV-1B6SEH8 477 aa18.12■□□□□ 0.49
SCAF4-206ENST00000485790 NFKBIEO00221 500 aa18.12■□□□□ 0.49
SCAF4-206ENST00000485790 ALDH1B1P30837 517 aa18.12■□□□□ 0.49
SCAF4-206ENST00000485790 NGEFQ8N5V2 710 aa18.12■□□□□ 0.49
SCAF4-206ENST00000485790 TAOK3Q9H2K8 898 aa18.12■□□□□ 0.49
SCAF4-206ENST00000485790 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
SCAF4-206ENST00000485790 KIAA1551Q9HCM1 1747 aa18.12■□□□□ 0.49
SCAF4-206ENST00000485790 EIF4A1P60842 406 aaKnown RBP18.11■□□□□ 0.49
SCAF4-206ENST00000485790 PRPF40BQ6NWY9 871 aaKnown RBP18.11■□□□□ 0.49
SCAF4-206ENST00000485790 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
SCAF4-206ENST00000485790 NYXQ9GZU5 481 aa18.11■□□□□ 0.49
SCAF4-206ENST00000485790 FAM177BA6PVY3 158 aa18.1■□□□□ 0.49
SCAF4-206ENST00000485790 DNAJC5GQ8N7S2 189 aa18.1■□□□□ 0.49
SCAF4-206ENST00000485790 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
SCAF4-206ENST00000485790 KLRG2A4D1S0 409 aaPredicted RBP18.09■□□□□ 0.49
SCAF4-206ENST00000485790 PRELPP51888 382 aa18.09■□□□□ 0.49
SCAF4-206ENST00000485790 RIPK4P57078 832 aa18.09■□□□□ 0.49
SCAF4-206ENST00000485790 LMOD3Q0VAK6 560 aa18.09■□□□□ 0.49
SCAF4-206ENST00000485790 RTKN2Q8IZC4 609 aa18.09■□□□□ 0.49
SCAF4-206ENST00000485790 HLFQ16534 295 aa18.08■□□□□ 0.48
SCAF4-206ENST00000485790 CCDC93Q567U6 631 aa18.08■□□□□ 0.48
SCAF4-206ENST00000485790 BABAM1Q9NWV8 329 aa18.08■□□□□ 0.48
SCAF4-206ENST00000485790 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.48
SCAF4-206ENST00000485790 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
SCAF4-206ENST00000485790 MYL6BP14649 208 aa18.07■□□□□ 0.48
SCAF4-206ENST00000485790 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
SCAF4-206ENST00000485790 DDX10Q13206 875 aaKnown RBP18.06■□□□□ 0.48
SCAF4-206ENST00000485790 MAP3K15Q6ZN16 1313 aa18.05■□□□□ 0.48
SCAF4-206ENST00000485790 IFFO2Q5TF58 517 aa18.05■□□□□ 0.48
SCAF4-206ENST00000485790 C7orf43Q8WVR3 580 aa18.05■□□□□ 0.48
SCAF4-206ENST00000485790 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
SCAF4-206ENST00000485790 ERBB4Q15303 1308 aa18.04■□□□□ 0.48
SCAF4-206ENST00000485790 TMX4Q9H1E5 349 aaPredicted RBP18.04■□□□□ 0.48
SCAF4-206ENST00000485790 NRXN2Q9P2S2 1712 aa18.03■□□□□ 0.48
SCAF4-206ENST00000485790 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
SCAF4-206ENST00000485790 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
SCAF4-206ENST00000485790 FKBP4Q02790 459 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCAF4-206ENST00000485790 GRIPAP1Q4V328 841 aa18.03■□□□□ 0.48
SCAF4-206ENST00000485790 CC2D2BQ6DHV5 1058 aa18.03■□□□□ 0.48
SCAF4-206ENST00000485790 TTLL7Q6ZT98 887 aa18.03■□□□□ 0.48
SCAF4-206ENST00000485790 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
SCAF4-206ENST00000485790 RPGRQ92834 1020 aaKnown RBP18.03■□□□□ 0.48
SCAF4-206ENST00000485790 KLRG1Q96E93 195 aa18.03■□□□□ 0.48
SCAF4-206ENST00000485790 BRCA1P38398 1863 aaKnown RBP18.02■□□□□ 0.48
SCAF4-206ENST00000485790 TMPOP42166 694 aaKnown RBP18.02■□□□□ 0.48
SCAF4-206ENST00000485790 WDR43Q15061 677 aaKnown RBP eCLIP18.02■□□□□ 0.48
SCAF4-206ENST00000485790 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
SCAF4-206ENST00000485790 ZBTB3Q9H5J0 574 aa18.02■□□□□ 0.48
SCAF4-206ENST00000485790 POTECB2RU33 542 aa18.01■□□□□ 0.47
SCAF4-206ENST00000485790 DDNO94850 711 aaPredicted RBP18.01■□□□□ 0.47
SCAF4-206ENST00000485790 GPTP24298 496 aa18.01■□□□□ 0.47
SCAF4-206ENST00000485790 PARP10Q53GL7 1025 aa18.01■□□□□ 0.47
SCAF4-206ENST00000485790 MYBBP1AQ9BQG0 1328 aaKnown RBP18■□□□□ 0.47
SCAF4-206ENST00000485790 NEUROD2Q15784 382 aa18■□□□□ 0.47
SCAF4-206ENST00000485790 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
SCAF4-206ENST00000485790 NUTM1Q86Y26 1132 aa18■□□□□ 0.47
SCAF4-206ENST00000485790 JDP2Q8WYK2 163 aa18■□□□□ 0.47
SCAF4-206ENST00000485790 RBM17Q96I25 401 aaKnown RBP18■□□□□ 0.47
SCAF4-206ENST00000485790 NLRP3Q96P20 1036 aa18■□□□□ 0.47
SCAF4-206ENST00000485790 AFDNP55196 1824 aaKnown RBP18■□□□□ 0.47
SCAF4-206ENST00000485790 HTRA3P83110 453 aa17.99■□□□□ 0.47
SCAF4-206ENST00000485790 CRY2Q49AN0 593 aa17.99■□□□□ 0.47
SCAF4-206ENST00000485790 SUSD4Q5VX71 490 aa17.99■□□□□ 0.47
SCAF4-206ENST00000485790 CHADLQ6NUI6 762 aa17.99■□□□□ 0.47
SCAF4-206ENST00000485790 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
SCAF4-206ENST00000485790 SYNE4Q8N205 404 aa17.99■□□□□ 0.47
SCAF4-206ENST00000485790 RUNDC1Q96C34 613 aa17.99■□□□□ 0.47
SCAF4-206ENST00000485790 ZNF277Q9NRM2 450 aaPredicted RBP17.99■□□□□ 0.47
SCAF4-206ENST00000485790 SIPA1L3O60292 1781 aaPredicted RBP17.99■□□□□ 0.47
SCAF4-206ENST00000485790 HOXA10P31260 410 aaPredicted RBP17.98■□□□□ 0.47
SCAF4-206ENST00000485790 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
SCAF4-206ENST00000485790 UTP14AQ9BVJ6 771 aaKnown RBP17.98■□□□□ 0.47
SCAF4-206ENST00000485790 JMYQ8N9B5 988 aa17.97■□□□□ 0.47
SCAF4-206ENST00000485790 CRAMP1Q96RY5 1269 aa17.97■□□□□ 0.47
SCAF4-206ENST00000485790 PSMD1Q99460 953 aa17.97■□□□□ 0.47
SCAF4-206ENST00000485790 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
SCAF4-206ENST00000485790 IARSP41252 1262 aaKnown RBP17.96■□□□□ 0.47
SCAF4-206ENST00000485790 CHL1O00533 1208 aa17.95■□□□□ 0.46
SCAF4-206ENST00000485790 SLC10A5Q5PT55 438 aa17.95■□□□□ 0.46
SCAF4-206ENST00000485790 OLFM4Q6UX06 510 aa17.95■□□□□ 0.46
SCAF4-206ENST00000485790 COPS6Q7L5N1 327 aa17.95■□□□□ 0.46
SCAF4-206ENST00000485790 CCDC146Q8IYE0 955 aa17.95■□□□□ 0.46
SCAF4-206ENST00000485790 L3MBTL3Q96JM7 780 aaPredicted RBP17.95■□□□□ 0.46
SCAF4-206ENST00000485790 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
SCAF4-206ENST00000485790 SCN7AQ01118 1682 aa17.94■□□□□ 0.46
SCAF4-206ENST00000485790 EIF6P56537 245 aaKnown RBP17.94■□□□□ 0.46
SCAF4-206ENST00000485790 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
SCAF4-206ENST00000485790 PDIA6Q15084 440 aa17.94■□□□□ 0.46
SCAF4-206ENST00000485790 PNMA8AQ86V59 439 aaPredicted RBP17.94■□□□□ 0.46
SCAF4-206ENST00000485790 LDHDQ86WU2 507 aa17.94■□□□□ 0.46
SCAF4-206ENST00000485790 HACL1Q9UJ83 578 aa17.94■□□□□ 0.46
SCAF4-206ENST00000485790 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
SCAF4-206ENST00000485790 CLEC11AQ9Y240 323 aa17.94■□□□□ 0.46
SCAF4-206ENST00000485790 IBTKQ9P2D0 1353 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms