RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 UPF3BQ9BZI7 483 aaKnown RBP18■□□□□ 0.47
TTC3-219ENST00000485402 KAT6BQ8WYB5 2073 aa18■□□□□ 0.47
TTC3-219ENST00000485402 AHDC1Q5TGY3 1603 aaPredicted RBP18■□□□□ 0.47
TTC3-219ENST00000485402 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
TTC3-219ENST00000485402 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
TTC3-219ENST00000485402 ANO2Q9NQ90 1003 aa17.99■□□□□ 0.47
TTC3-219ENST00000485402 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
TTC3-219ENST00000485402 ABCA3Q99758 1704 aa17.99■□□□□ 0.47
TTC3-219ENST00000485402 PHLPP1O60346 1717 aa17.99■□□□□ 0.47
TTC3-219ENST00000485402 ERC2O15083 957 aa17.99■□□□□ 0.47
TTC3-219ENST00000485402 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.99■□□□□ 0.47
TTC3-219ENST00000485402 ZKSCAN5Q9Y2L8 839 aa17.99■□□□□ 0.47
TTC3-219ENST00000485402 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
TTC3-219ENST00000485402 TMX3Q96JJ7 454 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 LMO7Q8WWI1 1683 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 LRSAM1Q6UWE0 723 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 CLEC17AQ6ZS10 378 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 ABCC6O95255 1503 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 KDM6AO15550 1401 aaPredicted RBP17.98■□□□□ 0.47
TTC3-219ENST00000485402 PCDH11XQ9BZA7 1347 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 PCDH11YQ9BZA8 1340 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 ZNF790Q6PG37 636 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 TSC1Q92574 1164 aa17.98■□□□□ 0.47
TTC3-219ENST00000485402 FLIIQ13045 1269 aa17.97■□□□□ 0.47
TTC3-219ENST00000485402 TTC5Q8N0Z6 440 aa17.97■□□□□ 0.47
TTC3-219ENST00000485402 LARP6Q9BRS8 491 aaKnown RBP17.97■□□□□ 0.47
TTC3-219ENST00000485402 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
TTC3-219ENST00000485402 ANKRD44Q8N8A2 993 aa17.97■□□□□ 0.47
TTC3-219ENST00000485402 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
TTC3-219ENST00000485402 CHPF2Q9P2E5 772 aa17.97■□□□□ 0.47
TTC3-219ENST00000485402 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
TTC3-219ENST00000485402 CYP2E1P05181 493 aaPredicted RBP17.97■□□□□ 0.47
TTC3-219ENST00000485402 LRRC37A3O60309 1634 aa17.97■□□□□ 0.47
TTC3-219ENST00000485402 A0A0G2JS52 829 aa17.96■□□□□ 0.47
TTC3-219ENST00000485402 FAM177BA6PVY3 158 aa17.95■□□□□ 0.46
TTC3-219ENST00000485402 GIGYF1O75420 1035 aaPredicted RBP17.95■□□□□ 0.46
TTC3-219ENST00000485402 C8orf37Q96NL8 207 aa17.95■□□□□ 0.46
TTC3-219ENST00000485402 CCDC39Q9UFE4 941 aa17.95■□□□□ 0.46
TTC3-219ENST00000485402 PTPRCP08575 1304 aa17.95■□□□□ 0.46
TTC3-219ENST00000485402 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
TTC3-219ENST00000485402 ZNF496Q96IT1 587 aaPredicted RBP17.94■□□□□ 0.46
TTC3-219ENST00000485402 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
TTC3-219ENST00000485402 C17orf53Q8N3J3 647 aaPredicted RBP17.94■□□□□ 0.46
TTC3-219ENST00000485402 IBTKQ9P2D0 1353 aaPredicted RBP17.94■□□□□ 0.46
TTC3-219ENST00000485402 TSPY26PQ9H489 355 aa17.93■□□□□ 0.46
TTC3-219ENST00000485402 GADD45BO75293 160 aaPredicted RBP17.93■□□□□ 0.46
TTC3-219ENST00000485402 PDLIM2Q96JY6 352 aa17.93■□□□□ 0.46
TTC3-219ENST00000485402 PALD1Q9ULE6 856 aa17.93■□□□□ 0.46
TTC3-219ENST00000485402 COL16A1Q07092 1604 aaPredicted RBP17.92■□□□□ 0.46
TTC3-219ENST00000485402 ZNF500O60304 480 aaPredicted RBP17.92■□□□□ 0.46
TTC3-219ENST00000485402 PTCD1O75127 700 aaKnown RBP17.92■□□□□ 0.46
TTC3-219ENST00000485402 CSPP1Q1MSJ5 1256 aa17.92■□□□□ 0.46
TTC3-219ENST00000485402 EXOC5O00471 708 aa17.92■□□□□ 0.46
TTC3-219ENST00000485402 PIP4K2AP48426 406 aaPredicted RBP17.92■□□□□ 0.46
TTC3-219ENST00000485402 SYTL4Q96C24 671 aaPredicted RBP17.92■□□□□ 0.46
TTC3-219ENST00000485402 MAP4K4O95819 1239 aaPredicted RBP17.91■□□□□ 0.46
TTC3-219ENST00000485402 AIMP1Q12904 312 aaKnown RBP17.91■□□□□ 0.46
TTC3-219ENST00000485402 HS1BP3Q53T59 392 aa17.91■□□□□ 0.46
TTC3-219ENST00000485402 PDE1AP54750 535 aa17.91■□□□□ 0.46
TTC3-219ENST00000485402 USP25Q9UHP3 1055 aa17.91■□□□□ 0.46
TTC3-219ENST00000485402 HMMRO75330 724 aa17.91■□□□□ 0.46
TTC3-219ENST00000485402 MBD3O95983 291 aa17.91■□□□□ 0.46
TTC3-219ENST00000485402 PROSER3Q2NL68 480 aa17.91■□□□□ 0.46
TTC3-219ENST00000485402 MYL6BP14649 208 aa17.9■□□□□ 0.46
TTC3-219ENST00000485402 SOS1Q07889 1333 aaPredicted RBP17.9■□□□□ 0.46
TTC3-219ENST00000485402 MCCP23508 829 aa17.9■□□□□ 0.46
TTC3-219ENST00000485402 DBF4Q9UBU7 674 aaPredicted RBP17.9■□□□□ 0.46
TTC3-219ENST00000485402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.9■□□□□ 0.46
TTC3-219ENST00000485402 HOXB7P09629 217 aa17.9■□□□□ 0.46
TTC3-219ENST00000485402 TTC12Q9H892 705 aaPredicted RBP17.9■□□□□ 0.46
TTC3-219ENST00000485402 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
TTC3-219ENST00000485402 KIAA2012Q0VF49 1180 aa17.89■□□□□ 0.45
TTC3-219ENST00000485402 CHMP4AQ9BY43 222 aa17.89■□□□□ 0.45
TTC3-219ENST00000485402 FMNL2Q96PY5 1086 aa17.89■□□□□ 0.45
TTC3-219ENST00000485402 RGS12O14924 1447 aa17.88■□□□□ 0.45
TTC3-219ENST00000485402 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
TTC3-219ENST00000485402 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
TTC3-219ENST00000485402 SASS6Q6UVJ0 657 aa17.88■□□□□ 0.45
TTC3-219ENST00000485402 SYAP1Q96A49 352 aaPredicted RBP17.88■□□□□ 0.45
TTC3-219ENST00000485402 IL1RAPL2Q9NP60 686 aa17.88■□□□□ 0.45
TTC3-219ENST00000485402 COL14A1Q05707 1796 aaKnown RBP17.88■□□□□ 0.45
TTC3-219ENST00000485402 TMOD3Q9NYL9 352 aa17.87■□□□□ 0.45
TTC3-219ENST00000485402 ERVV-2B6SEH9 535 aa17.87■□□□□ 0.45
TTC3-219ENST00000485402 USP48Q86UV5 1035 aa17.87■□□□□ 0.45
TTC3-219ENST00000485402 SNRPA1P09661 255 aaKnown RBP17.87■□□□□ 0.45
TTC3-219ENST00000485402 HSPA1LP34931 641 aa17.86■□□□□ 0.45
TTC3-219ENST00000485402 CCT4P50991 539 aaKnown RBP17.86■□□□□ 0.45
TTC3-219ENST00000485402 CHMP3Q9Y3E7 222 aa17.86■□□□□ 0.45
TTC3-219ENST00000485402 JCADQ9P266 1359 aa17.86■□□□□ 0.45
TTC3-219ENST00000485402 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
TTC3-219ENST00000485402 MAP7D2Q96T17 732 aa17.86■□□□□ 0.45
TTC3-219ENST00000485402 ZHX1Q9UKY1 873 aaPredicted RBP17.86■□□□□ 0.45
TTC3-219ENST00000485402 COL22A1Q8NFW1 1626 aaPredicted RBP17.86■□□□□ 0.45
TTC3-219ENST00000485402 HCLS1P14317 486 aaPredicted RBP17.85■□□□□ 0.45
TTC3-219ENST00000485402 NKX1-1Q15270 411 aaPredicted RBP17.85■□□□□ 0.45
TTC3-219ENST00000485402 DDB1Q16531 1140 aa17.85■□□□□ 0.45
TTC3-219ENST00000485402 SPATA31A1Q5TZJ5 1347 aa17.85■□□□□ 0.45
TTC3-219ENST00000485402 KDM3BQ7LBC6 1761 aa17.85■□□□□ 0.45
TTC3-219ENST00000485402 MEX3CQ5U5Q3 659 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms