RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KIF6Q6ZMV9 814 aa23■■□□□ 1.27
SREBF1-213ENST00000485080 TTLL7Q6ZT98 887 aa23■■□□□ 1.27
SREBF1-213ENST00000485080 MYH16Q9H6N6 1097 aa23■■□□□ 1.27
SREBF1-213ENST00000485080 TGFB2P61812 414 aa22.99■■□□□ 1.27
SREBF1-213ENST00000485080 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
SREBF1-213ENST00000485080 NLGN2Q8NFZ4 835 aa22.99■■□□□ 1.27
SREBF1-213ENST00000485080 SPINK5Q9NQ38 1064 aaPredicted RBP22.99■■□□□ 1.27
SREBF1-213ENST00000485080 CHPF2Q9P2E5 772 aa22.99■■□□□ 1.27
SREBF1-213ENST00000485080 CARMIL3Q8ND23 1372 aa22.99■■□□□ 1.27
SREBF1-213ENST00000485080 SERPINB2P05120 415 aa22.98■■□□□ 1.27
SREBF1-213ENST00000485080 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
SREBF1-213ENST00000485080 TSPYL6Q8N831 410 aa22.98■■□□□ 1.27
SREBF1-213ENST00000485080 SETDB2Q96T68 719 aa22.98■■□□□ 1.27
SREBF1-213ENST00000485080 HYPKQ9NX55 129 aa22.98■■□□□ 1.27
SREBF1-213ENST00000485080 HLFQ16534 295 aa22.97■■□□□ 1.27
SREBF1-213ENST00000485080 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
SREBF1-213ENST00000485080 ATP10DQ9P241 1426 aa22.97■■□□□ 1.27
SREBF1-213ENST00000485080 AFDNP55196 1824 aaKnown RBP22.96■■□□□ 1.27
SREBF1-213ENST00000485080 ELL2O00472 640 aaPredicted RBP22.96■■□□□ 1.27
SREBF1-213ENST00000485080 ANXA1P04083 346 aa22.96■■□□□ 1.27
SREBF1-213ENST00000485080 CCDC30Q5VVM6 783 aa22.96■■□□□ 1.27
SREBF1-213ENST00000485080 COPS6Q7L5N1 327 aa22.96■■□□□ 1.27
SREBF1-213ENST00000485080 TWISTNBQ3B726 338 aaPredicted RBP22.95■■□□□ 1.26
SREBF1-213ENST00000485080 GIGYF2Q6Y7W6 1299 aaKnown RBP22.95■■□□□ 1.26
SREBF1-213ENST00000485080 XAGE3Q8WTP9 111 aa22.95■■□□□ 1.26
SREBF1-213ENST00000485080 NUP98P52948 1817 aa22.94■■□□□ 1.26
SREBF1-213ENST00000485080 E9PSI1 815 aa22.94■■□□□ 1.26
SREBF1-213ENST00000485080 BICDL1Q6ZP65 573 aa22.94■■□□□ 1.26
SREBF1-213ENST00000485080 PXDNLA1KZ92 1463 aa22.93■■□□□ 1.26
SREBF1-213ENST00000485080 NIP7Q9Y221 180 aaKnown RBP eCLIP22.93■■□□□ 1.26
SREBF1-213ENST00000485080 KIAA1551Q9HCM1 1747 aa22.92■■□□□ 1.26
SREBF1-213ENST00000485080 DCAF8L1A6NGE4 600 aa22.92■■□□□ 1.26
SREBF1-213ENST00000485080 VAMP4O75379 141 aa22.92■■□□□ 1.26
SREBF1-213ENST00000485080 ZNF34Q8IZ26 560 aa22.92■■□□□ 1.26
SREBF1-213ENST00000485080 ZBTB3Q9H5J0 574 aa22.92■■□□□ 1.26
SREBF1-213ENST00000485080 EXOSC9Q06265 439 aaKnown RBP22.91■■□□□ 1.26
SREBF1-213ENST00000485080 HSP90AB3PQ58FF7 597 aa22.91■■□□□ 1.26
SREBF1-213ENST00000485080 PRR5LQ6MZQ0 368 aa22.91■■□□□ 1.26
SREBF1-213ENST00000485080 PLBD2Q8NHP8 589 aa22.91■■□□□ 1.26
SREBF1-213ENST00000485080 IBTKQ9P2D0 1353 aaPredicted RBP22.9■■□□□ 1.26
SREBF1-213ENST00000485080 SLFN5Q08AF3 891 aa22.9■■□□□ 1.26
SREBF1-213ENST00000485080 ANKRD13DQ6ZTN6 518 aa22.9■■□□□ 1.26
SREBF1-213ENST00000485080 TRMT2AQ8IZ69 625 aaKnown RBP22.9■■□□□ 1.26
SREBF1-213ENST00000485080 BRIP1Q9BX63 1249 aa22.9■■□□□ 1.26
SREBF1-213ENST00000485080 PDZRN3Q9UPQ7 1066 aa22.9■■□□□ 1.26
SREBF1-213ENST00000485080 CACNA1FO60840 1977 aa22.89■■□□□ 1.26
SREBF1-213ENST00000485080 AIMP1Q12904 312 aaKnown RBP22.89■■□□□ 1.25
SREBF1-213ENST00000485080 TPTE2Q6XPS3 522 aa22.89■■□□□ 1.25
SREBF1-213ENST00000485080 CNBD1Q8NA66 436 aa22.89■■□□□ 1.25
SREBF1-213ENST00000485080 KCNA3P22001 575 aa22.88■■□□□ 1.25
SREBF1-213ENST00000485080 PARP10Q53GL7 1025 aa22.88■■□□□ 1.25
SREBF1-213ENST00000485080 NBPF5PQ86XG9 351 aaPredicted RBP22.88■■□□□ 1.25
SREBF1-213ENST00000485080 STK31Q9BXU1 1019 aa22.88■■□□□ 1.25
SREBF1-213ENST00000485080 DPEP1P16444 411 aa22.87■■□□□ 1.25
SREBF1-213ENST00000485080 TCIRG1Q13488 830 aa22.87■■□□□ 1.25
SREBF1-213ENST00000485080 NYXQ9GZU5 481 aa22.87■■□□□ 1.25
SREBF1-213ENST00000485080 UBN2Q6ZU65 1347 aa22.86■■□□□ 1.25
SREBF1-213ENST00000485080 A0A0G2JLW4 131 aa22.86■■□□□ 1.25
SREBF1-213ENST00000485080 ST5P78524 1137 aa22.86■■□□□ 1.25
SREBF1-213ENST00000485080 PDE6BP35913 854 aa22.85■■□□□ 1.25
SREBF1-213ENST00000485080 TRIM28Q13263 835 aaKnown RBP22.85■■□□□ 1.25
SREBF1-213ENST00000485080 PHAXQ9H814 394 aaKnown RBP22.85■■□□□ 1.25
SREBF1-213ENST00000485080 BRCA1P38398 1863 aaKnown RBP22.85■■□□□ 1.25
SREBF1-213ENST00000485080 RNF123Q5XPI4 1314 aa22.84■■□□□ 1.25
SREBF1-213ENST00000485080 KLRG2A4D1S0 409 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-213ENST00000485080 GRIN3BO60391 1043 aa22.84■■□□□ 1.25
SREBF1-213ENST00000485080 GPR162Q16538 588 aa22.84■■□□□ 1.25
SREBF1-213ENST00000485080 N4BP2Q86UW6 1770 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-213ENST00000485080 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.25
SREBF1-213ENST00000485080 DDX58O95786 925 aaKnown RBP22.83■■□□□ 1.25
SREBF1-213ENST00000485080 SLC4A2P04920 1241 aa22.83■■□□□ 1.25
SREBF1-213ENST00000485080 YBX3P16989 372 aaKnown RBP eCLIP22.83■■□□□ 1.254e-8■■□□□ 14.1
SREBF1-213ENST00000485080 GPTP24298 496 aa22.83■■□□□ 1.25
SREBF1-213ENST00000485080 SUSD4Q5VX71 490 aa22.83■■□□□ 1.25
SREBF1-213ENST00000485080 PPP1R42Q7Z4L9 355 aa22.83■■□□□ 1.25
SREBF1-213ENST00000485080 ISCA1Q9BUE6 129 aa22.83■■□□□ 1.25
SREBF1-213ENST00000485080 PIM2Q9P1W9 311 aa22.83■■□□□ 1.25
SREBF1-213ENST00000485080 ANKRD36CQ5JPF3 1778 aa22.83■■□□□ 1.24
SREBF1-213ENST00000485080 RIC1Q4ADV7 1423 aa22.82■■□□□ 1.24
SREBF1-213ENST00000485080 NTSR2O95665 410 aa22.82■■□□□ 1.24
SREBF1-213ENST00000485080 NLRP10Q86W26 655 aa22.82■■□□□ 1.24
SREBF1-213ENST00000485080 ZNF428Q96B54 188 aa22.82■■□□□ 1.24
SREBF1-213ENST00000485080 CDCA7LQ96GN5 454 aa22.82■■□□□ 1.24
SREBF1-213ENST00000485080 H0YIN7 160 aa22.81■■□□□ 1.24
SREBF1-213ENST00000485080 NPHP1O15259 732 aa22.81■■□□□ 1.24
SREBF1-213ENST00000485080 CHRNA5P30532 468 aa22.81■■□□□ 1.24
SREBF1-213ENST00000485080 DLEC1Q9Y238 1755 aa22.81■■□□□ 1.24
SREBF1-213ENST00000485080 KSR2Q6VAB6 950 aa22.8■■□□□ 1.24
SREBF1-213ENST00000485080 RIC3Q7Z5B4 369 aa22.8■■□□□ 1.24
SREBF1-213ENST00000485080 C2CD5Q86YS7 1000 aa22.8■■□□□ 1.24
SREBF1-213ENST00000485080 UTP14AQ9BVJ6 771 aaKnown RBP22.8■■□□□ 1.24
SREBF1-213ENST00000485080 CT47B1P0C2W7 299 aaPredicted RBP22.79■■□□□ 1.24
SREBF1-213ENST00000485080 SLC10A5Q5PT55 438 aa22.79■■□□□ 1.24
SREBF1-213ENST00000485080 ARFGEF2Q9Y6D5 1785 aa22.78■■□□□ 1.24
SREBF1-213ENST00000485080 TCERG1O14776 1098 aaKnown RBP22.78■■□□□ 1.24
SREBF1-213ENST00000485080 SRGNP10124 158 aa22.78■■□□□ 1.24
SREBF1-213ENST00000485080 GTF2E1P29083 439 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-213ENST00000485080 HNRNPUQ00839 825 aaKnown RBP eCLIP22.78■■□□□ 1.24
SREBF1-213ENST00000485080 FLIIQ13045 1269 aa22.78■■□□□ 1.24
SREBF1-213ENST00000485080 DALRD3Q5D0E6 543 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms