RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 UNC5CLQ8IV45 518 aa20.69■□□□□ 0.9
CTSA-207ENST00000484855 SYTL4Q96C24 671 aaPredicted RBP20.69■□□□□ 0.9
CTSA-207ENST00000484855 C8orf37Q96NL8 207 aa20.69■□□□□ 0.9
CTSA-207ENST00000484855 MTX1Q13505 466 aa20.68■□□□□ 0.9
CTSA-207ENST00000484855 TTC22Q5TAA0 569 aa20.68■□□□□ 0.9
CTSA-207ENST00000484855 CERKQ8TCT0 537 aa20.68■□□□□ 0.9
CTSA-207ENST00000484855 RBM42Q9BTD8 480 aaKnown RBP20.68■□□□□ 0.9
CTSA-207ENST00000484855 TEX13AQ9BXU3 409 aaPredicted RBP20.68■□□□□ 0.9
CTSA-207ENST00000484855 GSPT1P15170 499 aaKnown RBP20.68■□□□□ 0.9
CTSA-207ENST00000484855 GCKRQ14397 625 aa20.68■□□□□ 0.9
CTSA-207ENST00000484855 SURF6O75683 361 aaKnown RBP20.67■□□□□ 0.9
CTSA-207ENST00000484855 SUCLG2Q96I99 432 aa20.67■□□□□ 0.9
CTSA-207ENST00000484855 NGLY1Q96IV0 654 aa20.67■□□□□ 0.9
CTSA-207ENST00000484855 NOP58Q9Y2X3 529 aaKnown RBP20.67■□□□□ 0.9
CTSA-207ENST00000484855 RAB11FIP3O75154 756 aa20.66■□□□□ 0.9
CTSA-207ENST00000484855 DNAJC10Q8IXB1 793 aa20.66■□□□□ 0.9
CTSA-207ENST00000484855 TUBGCP6Q96RT7 1819 aa20.66■□□□□ 0.9
CTSA-207ENST00000484855 BCL9LQ86UU0 1499 aa20.66■□□□□ 0.9
CTSA-207ENST00000484855 TJP1Q07157 1748 aa20.66■□□□□ 0.9
CTSA-207ENST00000484855 SPATA31A6Q5VVP1 1343 aa20.66■□□□□ 0.9
CTSA-207ENST00000484855 PRIM1P49642 420 aaKnown RBP20.65■□□□□ 0.9
CTSA-207ENST00000484855 MFAP1P55081 439 aaKnown RBP20.65■□□□□ 0.9
CTSA-207ENST00000484855 TTLL7Q6ZT98 887 aa20.65■□□□□ 0.9
CTSA-207ENST00000484855 ERICH6Q7L0X2 663 aa20.65■□□□□ 0.9
CTSA-207ENST00000484855 STARD3NLO95772 234 aa20.64■□□□□ 0.89
CTSA-207ENST00000484855 MARCH10Q8NA82 808 aaPredicted RBP20.64■□□□□ 0.89
CTSA-207ENST00000484855 TBC1D32Q96NH3 1257 aa20.64■□□□□ 0.89
CTSA-207ENST00000484855 BICC1Q9H694 974 aaKnown RBP20.64■□□□□ 0.89
CTSA-207ENST00000484855 VPS72Q15906 364 aa20.63■□□□□ 0.89
CTSA-207ENST00000484855 HSP90AB4PQ58FF6 505 aa20.63■□□□□ 0.89
CTSA-207ENST00000484855 KAZALD1Q96I82 304 aa20.63■□□□□ 0.89
CTSA-207ENST00000484855 OSBPL3Q9H4L5 887 aa20.63■□□□□ 0.89
CTSA-207ENST00000484855 ATP5J2-PTCD1G3V325 749 aa20.63■□□□□ 0.89
CTSA-207ENST00000484855 PDE1AP54750 535 aa20.63■□□□□ 0.89
CTSA-207ENST00000484855 SALL3Q9BXA9 1300 aa20.62■□□□□ 0.89
CTSA-207ENST00000484855 CDC45O75419 566 aa20.62■□□□□ 0.89
CTSA-207ENST00000484855 A0A0G2JS52 829 aa20.62■□□□□ 0.89
CTSA-207ENST00000484855 TBC1D9Q6ZT07 1266 aa20.62■□□□□ 0.89
CTSA-207ENST00000484855 RHPN1Q8TCX5 695 aa20.62■□□□□ 0.89
CTSA-207ENST00000484855 KIF1BPQ96EK5 621 aa20.62■□□□□ 0.89
CTSA-207ENST00000484855 MX1P20591 662 aa20.61■□□□□ 0.89
CTSA-207ENST00000484855 FAM98CQ17RN3 349 aaKnown RBP20.61■□□□□ 0.89
CTSA-207ENST00000484855 ZBTB3Q9H5J0 574 aa20.61■□□□□ 0.89
CTSA-207ENST00000484855 FNBP4Q8N3X1 1017 aaPredicted RBP20.61■□□□□ 0.89
CTSA-207ENST00000484855 ACSBG1Q96GR2 724 aa20.61■□□□□ 0.89
CTSA-207ENST00000484855 IL1RAPL2Q9NP60 686 aa20.61■□□□□ 0.89
CTSA-207ENST00000484855 ZNF330Q9Y3S2 320 aaPredicted RBP20.61■□□□□ 0.89
CTSA-207ENST00000484855 OS9Q13438 667 aaPredicted RBP20.6■□□□□ 0.89
CTSA-207ENST00000484855 SLC4A9Q96Q91 983 aa20.6■□□□□ 0.89
CTSA-207ENST00000484855 COL15A1P39059 1388 aa20.6■□□□□ 0.89
CTSA-207ENST00000484855 A0A087WZG4 1122 aa20.59■□□□□ 0.89
CTSA-207ENST00000484855 UBE3BQ7Z3V4 1068 aa20.59■□□□□ 0.89
CTSA-207ENST00000484855 C22orf23Q9BZE7 217 aa20.59■□□□□ 0.89
CTSA-207ENST00000484855 AK9Q5TCS8 1911 aa20.58■□□□□ 0.89
CTSA-207ENST00000484855 SDSP20132 328 aa20.58■□□□□ 0.89
CTSA-207ENST00000484855 CWC25Q9NXE8 425 aaPredicted RBP20.58■□□□□ 0.89
CTSA-207ENST00000484855 CYP19A1P11511 503 aaPredicted RBP20.58■□□□□ 0.88
CTSA-207ENST00000484855 KIF6Q6ZMV9 814 aa20.58■□□□□ 0.88
CTSA-207ENST00000484855 JARID2Q92833 1246 aaPredicted RBP20.58■□□□□ 0.88
CTSA-207ENST00000484855 PA2G4Q9UQ80 394 aaKnown RBP20.58■□□□□ 0.88
CTSA-207ENST00000484855 ANKRD36CQ5JPF3 1778 aa20.57■□□□□ 0.88
CTSA-207ENST00000484855 TSHZ3Q63HK5 1081 aa20.57■□□□□ 0.88
CTSA-207ENST00000484855 ERC1Q8IUD2 1116 aa20.57■□□□□ 0.88
CTSA-207ENST00000484855 STAP2Q9UGK3 403 aa20.57■□□□□ 0.88
CTSA-207ENST00000484855 USP21Q9UK80 565 aa20.57■□□□□ 0.88
CTSA-207ENST00000484855 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
CTSA-207ENST00000484855 EPHA10Q5JZY3 1008 aa20.56■□□□□ 0.88
CTSA-207ENST00000484855 AOX1Q06278 1338 aa20.56■□□□□ 0.88
CTSA-207ENST00000484855 CASP7P55210 303 aa20.56■□□□□ 0.88
CTSA-207ENST00000484855 THSD7AQ9UPZ6 1657 aa20.56■□□□□ 0.88
CTSA-207ENST00000484855 NUTM1Q86Y26 1132 aa20.55■□□□□ 0.88
CTSA-207ENST00000484855 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
CTSA-207ENST00000484855 HSPA1LP34931 641 aa20.55■□□□□ 0.88
CTSA-207ENST00000484855 MEX3CQ5U5Q3 659 aaKnown RBP20.55■□□□□ 0.88
CTSA-207ENST00000484855 DAXXQ9UER7 740 aaPredicted RBP20.55■□□□□ 0.88
CTSA-207ENST00000484855 H7C1W4 665 aa20.54■□□□□ 0.88
CTSA-207ENST00000484855 EIF5BO60841 1220 aaKnown RBP20.54■□□□□ 0.88
CTSA-207ENST00000484855 CASC1Q6TDU7 716 aa20.54■□□□□ 0.88
CTSA-207ENST00000484855 ZBTB1Q9Y2K1 713 aa20.54■□□□□ 0.88
CTSA-207ENST00000484855 NUP98P52948 1817 aa20.54■□□□□ 0.88
CTSA-207ENST00000484855 MYT1Q01538 1121 aa20.53■□□□□ 0.88
CTSA-207ENST00000484855 G3BP1Q13283 466 aaKnown RBP eCLIP20.53■□□□□ 0.88
CTSA-207ENST00000484855 RABL6Q3YEC7 729 aaPredicted RBP20.53■□□□□ 0.88
CTSA-207ENST00000484855 TCIRG1Q13488 830 aa20.53■□□□□ 0.88
CTSA-207ENST00000484855 MAP3K15Q6ZN16 1313 aa20.53■□□□□ 0.88
CTSA-207ENST00000484855 RREB1Q92766 1687 aa20.53■□□□□ 0.88
CTSA-207ENST00000484855 CLASRPQ8N2M8 674 aaKnown RBP20.52■□□□□ 0.88
CTSA-207ENST00000484855 ARXQ96QS3 562 aa20.52■□□□□ 0.88
CTSA-207ENST00000484855 ISCA1Q9BUE6 129 aa20.52■□□□□ 0.88
CTSA-207ENST00000484855 PALLDQ8WX93 1383 aa20.51■□□□□ 0.87
CTSA-207ENST00000484855 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
CTSA-207ENST00000484855 ATP6V1AP38606 617 aa20.51■□□□□ 0.87
CTSA-207ENST00000484855 SIL1Q9H173 461 aa20.51■□□□□ 0.87
CTSA-207ENST00000484855 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
CTSA-207ENST00000484855 IL6STP40189 918 aaPredicted RBP20.5■□□□□ 0.87
CTSA-207ENST00000484855 RBM25P49756 843 aaKnown RBP20.5■□□□□ 0.87
CTSA-207ENST00000484855 SIK1P57059 783 aa20.5■□□□□ 0.87
CTSA-207ENST00000484855 RTL5Q5HYW3 569 aaPredicted RBP20.5■□□□□ 0.87
CTSA-207ENST00000484855 KLHDC4Q8TBB5 520 aa20.5■□□□□ 0.87
CTSA-207ENST00000484855 SMARCC1Q92922 1105 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms