RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 HOMER2Q9NSB8 354 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 PTPRCP08575 1304 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 NUTM2BA6NNL0 878 aaPredicted RBP12.6□□□□□ -0.39
PATJ-207ENST00000484562 NUTM2EB1AL46 878 aaPredicted RBP12.6□□□□□ -0.39
PATJ-207ENST00000484562 LDHCP07864 332 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 NBPF8Q3BBV2 869 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 NUTM2AQ8IVF1 878 aaPredicted RBP12.6□□□□□ -0.39
PATJ-207ENST00000484562 MACROD2A1Z1Q3 448 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 HMG20BQ9P0W2 317 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
PATJ-207ENST00000484562 NUDT16Q96DE0 195 aaKnown RBP12.59□□□□□ -0.39
PATJ-207ENST00000484562 MYD88Q99836 296 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 PAXBP1Q9Y5B6 917 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 TMCO5BA8MYB1 307 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 ACTN2P35609 894 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 DNAAF4Q8WXU2 420 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 RMND1Q9NWS8 449 aa12.59□□□□□ -0.39
PATJ-207ENST00000484562 NKTRP30414 1462 aaKnown RBP12.59□□□□□ -0.39
PATJ-207ENST00000484562 CKAP4Q07065 602 aaKnown RBP12.59□□□□□ -0.39
PATJ-207ENST00000484562 CCDC85AQ96PX6 553 aaPredicted RBP12.59□□□□□ -0.39
PATJ-207ENST00000484562 BMP15O95972 392 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.4
PATJ-207ENST00000484562 SNW1Q13573 536 aaKnown RBP12.58□□□□□ -0.4
PATJ-207ENST00000484562 TMC6Q7Z403 805 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 SREK1Q8WXA9 508 aaKnown RBP12.58□□□□□ -0.4
PATJ-207ENST00000484562 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
PATJ-207ENST00000484562 ANKIB1Q9P2G1 1089 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 PABPN1LA6NDY0 278 aaKnown RBP12.58□□□□□ -0.4
PATJ-207ENST00000484562 CBX1P83916 185 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 CPLX3Q8WVH0 158 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 PRIMPOLQ96LW4 560 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 USP25Q9UHP3 1055 aa12.58□□□□□ -0.4
PATJ-207ENST00000484562 TRAF1Q13077 416 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 DBF4Q9UBU7 674 aaPredicted RBP12.57□□□□□ -0.4
PATJ-207ENST00000484562 COMMD10Q9Y6G5 202 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 LRRC45Q96CN5 670 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
PATJ-207ENST00000484562 TROQ12816 1431 aaPredicted RBP12.57□□□□□ -0.4
PATJ-207ENST00000484562 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 UBA7P41226 1012 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 PDE4BQ07343 736 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 USP37Q86T82 979 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 ECHDC1Q9NTX5 307 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 IKBKGQ9Y6K9 419 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 STX6O43752 255 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 MAATS1Q7Z4T9 603 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
PATJ-207ENST00000484562 PRG4Q92954 1404 aaPredicted RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 TUBB4AP04350 444 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 CKAP2LQ8IYA6 745 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 SSH1Q8WYL5 1049 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 CTAGE1Q96RT6 745 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.56□□□□□ -0.4
PATJ-207ENST00000484562 UBE2HP62256 183 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 TCERG1LQ5VWI1 586 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 TNPO1Q92973 898 aaKnown RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 SMARCA5O60264 1052 aaPredicted RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 C16orf45Q96MC5 204 aaPredicted RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 HSF2BPO75031 334 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 NOP2P46087 812 aaKnown RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 KIAA0753Q2KHM9 967 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 PPP4R3BQ5MIZ7 849 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 SPTY2D1Q68D10 685 aaPredicted RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
PATJ-207ENST00000484562 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
PATJ-207ENST00000484562 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
PATJ-207ENST00000484562 PRC1O43663 620 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 SSFA2P28290 1259 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 PRPHP41219 470 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 ZNF165P49910 485 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 DNA2P51530 1060 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 SPAG1Q07617 926 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 MPHOSPH6Q99547 160 aaKnown RBP12.55□□□□□ -0.4
PATJ-207ENST00000484562 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
PATJ-207ENST00000484562 TRMT1Q9NXH9 659 aaKnown RBP12.55□□□□□ -0.4
PATJ-207ENST00000484562 USP16Q9Y5T5 823 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 BAG3O95817 575 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 GJB2P29033 226 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 TICAM2Q86XR7 235 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 IDEP14735 1019 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 MCM10Q7L590 875 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 NBPF7P0C2Y1 421 aaPredicted RBP12.55□□□□□ -0.4
PATJ-207ENST00000484562 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
PATJ-207ENST00000484562 DYNC1I1O14576 645 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 ADCY5O95622 1261 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 PRPF4BQ13523 1007 aaKnown RBP12.55□□□□□ -0.4
PATJ-207ENST00000484562 BMP2KLQ5H9B9 411 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 TMEM67Q5HYA8 995 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 CCDC174Q6PII3 467 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 NCOA7Q8NI08 942 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 ERMNQ8TAM6 284 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 KAT14Q9H8E8 782 aa12.55□□□□□ -0.4
PATJ-207ENST00000484562 CYLC1P35663 651 aaPredicted RBP12.54□□□□□ -0.4
PATJ-207ENST00000484562 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
PATJ-207ENST00000484562 RPGRQ92834 1020 aaKnown RBP12.54□□□□□ -0.4
PATJ-207ENST00000484562 CCDC8Q9H0W5 538 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms