RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
SSR1-208ENST00000483409 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
SSR1-208ENST00000483409 ANKRD31Q8N7Z5 1873 aa17.36■□□□□ 0.37
SSR1-208ENST00000483409 SERPINB2P05120 415 aa17.36■□□□□ 0.37
SSR1-208ENST00000483409 HLFQ16534 295 aa17.36■□□□□ 0.37
SSR1-208ENST00000483409 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
SSR1-208ENST00000483409 WDR63Q8IWG1 891 aa17.36■□□□□ 0.37
SSR1-208ENST00000483409 CHPF2Q9P2E5 772 aa17.36■□□□□ 0.37
SSR1-208ENST00000483409 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
SSR1-208ENST00000483409 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
SSR1-208ENST00000483409 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
SSR1-208ENST00000483409 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
SSR1-208ENST00000483409 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSR1-208ENST00000483409 WWC3Q9ULE0 1092 aa17.35■□□□□ 0.37
SSR1-208ENST00000483409 MAP3K15Q6ZN16 1313 aa17.35■□□□□ 0.37
SSR1-208ENST00000483409 CARMIL3Q8ND23 1372 aa17.35■□□□□ 0.37
SSR1-208ENST00000483409 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
SSR1-208ENST00000483409 GPR162Q16538 588 aa17.34■□□□□ 0.37
SSR1-208ENST00000483409 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
SSR1-208ENST00000483409 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
SSR1-208ENST00000483409 FANCIQ9NVI1 1328 aa17.34■□□□□ 0.37
SSR1-208ENST00000483409 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
SSR1-208ENST00000483409 XAGE3Q8WTP9 111 aa17.33■□□□□ 0.36
SSR1-208ENST00000483409 SPINK5Q9NQ38 1064 aaPredicted RBP17.33■□□□□ 0.36
SSR1-208ENST00000483409 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSR1-208ENST00000483409 CHD4Q14839 1912 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 A0A0G2JLW4 131 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 ERVV-1B6SEH8 477 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 TGFB2P61812 414 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 CCDC24Q8N4L8 307 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 DLEC1Q9Y238 1755 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 UTRNP46939 3433 aa17.32■□□□□ 0.36
SSR1-208ENST00000483409 ARFGEF2Q9Y6D5 1785 aa17.31■□□□□ 0.36
SSR1-208ENST00000483409 RGL2O15211 777 aa17.31■□□□□ 0.36
SSR1-208ENST00000483409 NPHP1O15259 732 aa17.31■□□□□ 0.36
SSR1-208ENST00000483409 DPEP1P16444 411 aa17.31■□□□□ 0.36
SSR1-208ENST00000483409 YBX3P16989 372 aaKnown RBP eCLIP17.31■□□□□ 0.364e-9■□□□□ 11.3
SSR1-208ENST00000483409 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
SSR1-208ENST00000483409 COL11A2P13942 1736 aaPredicted RBP17.3■□□□□ 0.36
SSR1-208ENST00000483409 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
SSR1-208ENST00000483409 FAM177BA6PVY3 158 aa17.3■□□□□ 0.36
SSR1-208ENST00000483409 TWISTNBQ3B726 338 aaPredicted RBP17.3■□□□□ 0.36
SSR1-208ENST00000483409 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
SSR1-208ENST00000483409 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
SSR1-208ENST00000483409 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
SSR1-208ENST00000483409 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
SSR1-208ENST00000483409 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
SSR1-208ENST00000483409 GPTP24298 496 aa17.29■□□□□ 0.36
SSR1-208ENST00000483409 CHRNA5P30532 468 aa17.29■□□□□ 0.36
SSR1-208ENST00000483409 GOLGA2Q08379 1002 aa17.29■□□□□ 0.36
SSR1-208ENST00000483409 NBPF5PQ86XG9 351 aaPredicted RBP17.29■□□□□ 0.36
SSR1-208ENST00000483409 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
SSR1-208ENST00000483409 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
SSR1-208ENST00000483409 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
SSR1-208ENST00000483409 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
SSR1-208ENST00000483409 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
SSR1-208ENST00000483409 GIGYF2Q6Y7W6 1299 aaKnown RBP17.28■□□□□ 0.36
SSR1-208ENST00000483409 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
SSR1-208ENST00000483409 UBN2Q6ZU65 1347 aa17.27■□□□□ 0.36
SSR1-208ENST00000483409 KCNA3P22001 575 aa17.27■□□□□ 0.36
SSR1-208ENST00000483409 ST5P78524 1137 aa17.27■□□□□ 0.36
SSR1-208ENST00000483409 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
SSR1-208ENST00000483409 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
SSR1-208ENST00000483409 TPTE2Q6XPS3 522 aa17.25■□□□□ 0.35
SSR1-208ENST00000483409 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
SSR1-208ENST00000483409 ZNF34Q8IZ26 560 aa17.25■□□□□ 0.35
SSR1-208ENST00000483409 BRIP1Q9BX63 1249 aa17.25■□□□□ 0.35
SSR1-208ENST00000483409 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
SSR1-208ENST00000483409 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
SSR1-208ENST00000483409 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
SSR1-208ENST00000483409 ANKRD13DQ6ZTN6 518 aa17.24■□□□□ 0.35
SSR1-208ENST00000483409 PLBD2Q8NHP8 589 aa17.24■□□□□ 0.35
SSR1-208ENST00000483409 STK31Q9BXU1 1019 aa17.24■□□□□ 0.35
SSR1-208ENST00000483409 PIM2Q9P1W9 311 aa17.24■□□□□ 0.35
SSR1-208ENST00000483409 H0YIN7 160 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 GRIN3BO60391 1043 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 VAMP4O75379 141 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 PDE6BP35913 854 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 ABCC12Q96J65 1359 aa17.23■□□□□ 0.35
SSR1-208ENST00000483409 E9PSI1 815 aa17.22■□□□□ 0.35
SSR1-208ENST00000483409 TCIRG1Q13488 830 aa17.22■□□□□ 0.35
SSR1-208ENST00000483409 PARP10Q53GL7 1025 aa17.22■□□□□ 0.35
SSR1-208ENST00000483409 DALRD3Q5D0E6 543 aaKnown RBP17.22■□□□□ 0.35
SSR1-208ENST00000483409 ZNF428Q96B54 188 aa17.22■□□□□ 0.35
SSR1-208ENST00000483409 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
SSR1-208ENST00000483409 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
SSR1-208ENST00000483409 NTSR2O95665 410 aa17.21■□□□□ 0.35
SSR1-208ENST00000483409 ERFEQ4G0M1 354 aa17.21■□□□□ 0.35
SSR1-208ENST00000483409 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
SSR1-208ENST00000483409 RIC3Q7Z5B4 369 aa17.21■□□□□ 0.35
SSR1-208ENST00000483409 ZNF622Q969S3 477 aaKnown RBP eCLIP17.21■□□□□ 0.353e-14■■■□□ 15.7
SSR1-208ENST00000483409 LAMB2P55268 1798 aa17.2■□□□□ 0.34
SSR1-208ENST00000483409 SLX4Q8IY92 1834 aa17.2■□□□□ 0.34
SSR1-208ENST00000483409 SLC4A2P04920 1241 aa17.2■□□□□ 0.34
SSR1-208ENST00000483409 SLFN5Q08AF3 891 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms