RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 COL9A1P20849 921 aa9.71□□□□□ -0.86
CHD6-209ENST00000482596 AFDNP55196 1824 aaKnown RBP9.7□□□□□ -0.86
CHD6-209ENST00000482596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.7□□□□□ -0.86
CHD6-209ENST00000482596 LOC102724428A0A0B4J2F2 783 aa9.7□□□□□ -0.86
CHD6-209ENST00000482596 SIK1P57059 783 aa9.7□□□□□ -0.86
CHD6-209ENST00000482596 ZFP91Q96JP5 570 aaPredicted RBP9.7□□□□□ -0.86
CHD6-209ENST00000482596 HACL1Q9UJ83 578 aa9.7□□□□□ -0.86
CHD6-209ENST00000482596 LAMB4A4D0S4 1761 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 RGL2O15211 777 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 RNF123Q5XPI4 1314 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 TTC21BQ7Z4L5 1316 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 SAPCD2Q86UD0 394 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 TTLL6Q8N841 843 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 SMARCC1Q92922 1105 aaPredicted RBP9.69□□□□□ -0.86
CHD6-209ENST00000482596 PAPPA2Q9BXP8 1791 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 CABP1Q9NZU7 370 aa9.69□□□□□ -0.86
CHD6-209ENST00000482596 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
CHD6-209ENST00000482596 CENPFP49454 3210 aa9.68□□□□□ -0.86
CHD6-209ENST00000482596 ZNF541Q9H0D2 1346 aa9.68□□□□□ -0.86
CHD6-209ENST00000482596 LTV1Q96GA3 475 aaPredicted RBP9.68□□□□□ -0.86
CHD6-209ENST00000482596 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
CHD6-209ENST00000482596 SRP68Q9UHB9 627 aaKnown RBP9.68□□□□□ -0.86
CHD6-209ENST00000482596 AKAP11Q9UKA4 1901 aa9.67□□□□□ -0.86
CHD6-209ENST00000482596 POLRMTO00411 1230 aaKnown RBP9.67□□□□□ -0.86
CHD6-209ENST00000482596 TRPA1O75762 1119 aa9.67□□□□□ -0.86
CHD6-209ENST00000482596 RFC4P35249 363 aa9.67□□□□□ -0.86
CHD6-209ENST00000482596 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
CHD6-209ENST00000482596 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
CHD6-209ENST00000482596 PNMA8AQ86V59 439 aaPredicted RBP9.67□□□□□ -0.86
CHD6-209ENST00000482596 PIGBQ92521 554 aa9.67□□□□□ -0.86
CHD6-209ENST00000482596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.67□□□□□ -0.861e-9■■□□□ 13.7
CHD6-209ENST00000482596 HTTP42858 3142 aa9.67□□□□□ -0.86
CHD6-209ENST00000482596 LAMA3Q16787 3333 aa9.67□□□□□ -0.86
CHD6-209ENST00000482596 C21orf2O43822 256 aa9.66□□□□□ -0.86
CHD6-209ENST00000482596 SCUBE2Q9NQ36 999 aa9.66□□□□□ -0.86
CHD6-209ENST00000482596 RBM27Q9P2N5 1060 aaKnown RBP9.66□□□□□ -0.86
CHD6-209ENST00000482596 MYH14Q7Z406 1995 aaKnown RBP9.66□□□□□ -0.86
CHD6-209ENST00000482596 PLA2G5P39877 138 aa9.65□□□□□ -0.86
CHD6-209ENST00000482596 EFCAB3Q8N7B9 438 aa9.65□□□□□ -0.86
CHD6-209ENST00000482596 RNF186Q9NXI6 227 aa9.65□□□□□ -0.86
CHD6-209ENST00000482596 SAGE1Q9NXZ1 904 aa9.65□□□□□ -0.86
CHD6-209ENST00000482596 CACNA1SQ13698 1873 aa9.65□□□□□ -0.86
CHD6-209ENST00000482596 COL5A3P25940 1745 aaPredicted RBP9.65□□□□□ -0.87
CHD6-209ENST00000482596 H0YGN5 161 aa9.64□□□□□ -0.87
CHD6-209ENST00000482596 SYNE4Q8N205 404 aa9.64□□□□□ -0.87
CHD6-209ENST00000482596 ASAP1Q9ULH1 1129 aa9.64□□□□□ -0.87
CHD6-209ENST00000482596 KIAA0100Q14667 2235 aaKnown RBP9.64□□□□□ -0.87
CHD6-209ENST00000482596 USP31Q70CQ4 1352 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 RBBP6Q7Z6E9 1792 aaKnown RBP9.63□□□□□ -0.87
CHD6-209ENST00000482596 LTBP3Q9NS15 1303 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 NRXN2Q9P2S2 1712 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 NOGQ13253 232 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 C2CD5Q86YS7 1000 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
CHD6-209ENST00000482596 HHIPL1Q96JK4 782 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 TAOK3Q9H2K8 898 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 INSRP06213 1382 aa9.63□□□□□ -0.87
CHD6-209ENST00000482596 SOX1O00570 391 aaPredicted RBP9.62□□□□□ -0.87
CHD6-209ENST00000482596 CELF2O95319 508 aaKnown RBP9.62□□□□□ -0.87
CHD6-209ENST00000482596 TM4SF1P30408 202 aa9.62□□□□□ -0.87
CHD6-209ENST00000482596 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
CHD6-209ENST00000482596 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
CHD6-209ENST00000482596 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
CHD6-209ENST00000482596 COL11A2P13942 1736 aaPredicted RBP9.62□□□□□ -0.87
CHD6-209ENST00000482596 CARMIL3Q8ND23 1372 aa9.62□□□□□ -0.87
CHD6-209ENST00000482596 STK25O00506 426 aa9.61□□□□□ -0.87
CHD6-209ENST00000482596 RPS6KA4O75676 772 aa9.61□□□□□ -0.87
CHD6-209ENST00000482596 PKN2Q16513 984 aaKnown RBP9.61□□□□□ -0.87
CHD6-209ENST00000482596 BICDL1Q6ZP65 573 aa9.61□□□□□ -0.87
CHD6-209ENST00000482596 LRCH3Q96II8 777 aa9.61□□□□□ -0.87
CHD6-209ENST00000482596 SNX27Q96L92 541 aa9.61□□□□□ -0.87
CHD6-209ENST00000482596 SLX4Q8IY92 1834 aa9.61□□□□□ -0.87
CHD6-209ENST00000482596 TTC21AQ8NDW8 1320 aa9.6□□□□□ -0.87
CHD6-209ENST00000482596 USP42Q9H9J4 1324 aaKnown RBP9.6□□□□□ -0.87
CHD6-209ENST00000482596 ANKRD31Q8N7Z5 1873 aa9.6□□□□□ -0.87
CHD6-209ENST00000482596 MON2Q7Z3U7 1717 aa9.6□□□□□ -0.87
CHD6-209ENST00000482596 CYP27B1O15528 508 aa9.6□□□□□ -0.87
CHD6-209ENST00000482596 EN2P19622 333 aaPredicted RBP9.6□□□□□ -0.87
CHD6-209ENST00000482596 USHBP1Q8N6Y0 703 aa9.6□□□□□ -0.87
CHD6-209ENST00000482596 FAM122AQ96E09 287 aa9.6□□□□□ -0.87
CHD6-209ENST00000482596 ERBB4Q15303 1308 aa9.59□□□□□ -0.87
CHD6-209ENST00000482596 MUC3AQ02505 3323 aa9.59□□□□□ -0.87
CHD6-209ENST00000482596 FAM155AB1AL88 458 aaPredicted RBP9.59□□□□□ -0.87
CHD6-209ENST00000482596 KIF23Q02241 960 aaPredicted RBP9.59□□□□□ -0.87
CHD6-209ENST00000482596 FBXO46Q6PJ61 603 aaPredicted RBP9.59□□□□□ -0.87
CHD6-209ENST00000482596 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.59□□□□□ -0.87
CHD6-209ENST00000482596 ZNF408Q9H9D4 720 aa9.59□□□□□ -0.87
CHD6-209ENST00000482596 HDAC9Q9UKV0 1011 aa9.59□□□□□ -0.87
CHD6-209ENST00000482596 KDRP35968 1356 aa9.59□□□□□ -0.87
CHD6-209ENST00000482596 H0YIN7 160 aa9.58□□□□□ -0.88
CHD6-209ENST00000482596 IP6K1Q92551 441 aa9.58□□□□□ -0.88
CHD6-209ENST00000482596 ZNF622Q969S3 477 aaKnown RBP eCLIP9.58□□□□□ -0.881e-11■■■□□ 15.7
CHD6-209ENST00000482596 CD163L1Q9NR16 1453 aa9.58□□□□□ -0.88
CHD6-209ENST00000482596 PCDH11XQ9BZA7 1347 aa9.57□□□□□ -0.88
CHD6-209ENST00000482596 PCDH11YQ9BZA8 1340 aa9.57□□□□□ -0.88
CHD6-209ENST00000482596 SMG6Q86US8 1419 aaKnown RBP9.57□□□□□ -0.88
CHD6-209ENST00000482596 EPS15P42566 896 aa9.57□□□□□ -0.88
CHD6-209ENST00000482596 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms