RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 C4orf17Q53FE4 359 aa6.24□□□□□ -1.41
VPS41-212ENST00000482217 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
VPS41-212ENST00000482217 GPR161Q8N6U8 529 aaKnown RBP6.24□□□□□ -1.41
VPS41-212ENST00000482217 GAS2L1Q99501 681 aaPredicted RBP6.24□□□□□ -1.41
VPS41-212ENST00000482217 CABP1Q9NZU7 370 aa6.24□□□□□ -1.41
VPS41-212ENST00000482217 EML1O00423 815 aa6.23□□□□□ -1.41
VPS41-212ENST00000482217 ZDHHC1Q8WTX9 485 aa6.23□□□□□ -1.41
VPS41-212ENST00000482217 TRERF1Q96PN7 1200 aa6.23□□□□□ -1.41
VPS41-212ENST00000482217 MKNK1Q9BUB5 465 aa6.23□□□□□ -1.41
VPS41-212ENST00000482217 CUEDC1Q9NWM3 386 aaPredicted RBP6.23□□□□□ -1.41
VPS41-212ENST00000482217 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
VPS41-212ENST00000482217 SCNN1AP37088 669 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 SERPINB4P48594 390 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
VPS41-212ENST00000482217 DBN1Q16643 649 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 SND1Q7KZF4 910 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS41-212ENST00000482217 PGBD3Q8N328 593 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 L3MBTL2Q969R5 705 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 MYO19Q96H55 970 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 CNTNAP3BQ96NU0 1288 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 CNTNAP3Q9BZ76 1288 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 NUCKS1Q9H1E3 243 aaKnown RBP6.22□□□□□ -1.41
VPS41-212ENST00000482217 SEPT3Q9UH03 358 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
VPS41-212ENST00000482217 SOWAHDA6NJG2 315 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 SLURP2P0DP57 97 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 PHKA2P46019 1235 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 MFAP1P55081 439 aaKnown RBP6.21□□□□□ -1.42
VPS41-212ENST00000482217 KRT76Q01546 638 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
VPS41-212ENST00000482217 NBPF1Q3BBV0 1214 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 TMCO4Q5TGY1 634 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 C1orf53Q5VUE5 145 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 C16orf46Q6P387 395 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 CAPN12Q6ZSI9 719 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 FAM9AQ8IZU1 332 aaPredicted RBP6.21□□□□□ -1.42
VPS41-212ENST00000482217 HELQQ8TDG4 1101 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 GTF3C2Q8WUA4 911 aaPredicted RBP6.21□□□□□ -1.42
VPS41-212ENST00000482217 CRISPLD1Q9H336 500 aa6.21□□□□□ -1.42
VPS41-212ENST00000482217 ICMTO60725 284 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 ABL1P00519 1130 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 FKBP4Q02790 459 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS41-212ENST00000482217 NAA30Q147X3 362 aaPredicted RBP6.2□□□□□ -1.42
VPS41-212ENST00000482217 RTN1Q16799 776 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 EFHC2Q5JST6 749 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 RNFT1Q5M7Z0 435 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 ALDH16A1Q8IZ83 802 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 CFHR5Q9BXR6 569 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 MBIPQ9NS73 344 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 ZDHHC3Q9NYG2 299 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 PHF24Q9UPV7 400 aa6.2□□□□□ -1.42
VPS41-212ENST00000482217 MSX1P28360 303 aa6.19□□□□□ -1.42
VPS41-212ENST00000482217 PLA2G4AP47712 749 aa6.19□□□□□ -1.42
VPS41-212ENST00000482217 GAS6Q14393 721 aa6.19□□□□□ -1.42
VPS41-212ENST00000482217 SH3PXD2AQ5TCZ1 1133 aa6.19□□□□□ -1.42
VPS41-212ENST00000482217 GTPBP3Q969Y2 492 aaKnown RBP6.19□□□□□ -1.42
VPS41-212ENST00000482217 QTRT2Q9H974 415 aaKnown RBP6.19□□□□□ -1.42
VPS41-212ENST00000482217 GPAMQ9HCL2 828 aa6.19□□□□□ -1.42
VPS41-212ENST00000482217 NSFL1CQ9UNZ2 370 aaKnown RBP6.19□□□□□ -1.42
VPS41-212ENST00000482217 HCN4Q9Y3Q4 1203 aa6.19□□□□□ -1.42
VPS41-212ENST00000482217 GPC6Q9Y625 555 aaPredicted RBP6.19□□□□□ -1.42
VPS41-212ENST00000482217 PARP3Q9Y6F1 533 aa6.19□□□□□ -1.42
VPS41-212ENST00000482217 DNMT3AQ9Y6K1 912 aaPredicted RBP6.19□□□□□ -1.42
VPS41-212ENST00000482217 H3BRB1 525 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 NPR3P17342 541 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 TATP17735 454 aaPredicted RBP6.18□□□□□ -1.42
VPS41-212ENST00000482217 HIF1AQ16665 826 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 COX20Q5RI15 118 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 FIGNL1Q6PIW4 674 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 NLRP8Q86W28 1048 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 GLYCTKQ8IVS8 523 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 POLR3GLQ9BT43 218 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 PHACTR1Q9C0D0 580 aa6.18□□□□□ -1.42
VPS41-212ENST00000482217 TUT1Q9H6E5 874 aaKnown RBP6.18□□□□□ -1.42
VPS41-212ENST00000482217 FAM13AO94988 1023 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 ADAMTS2O95450 1211 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 TXLNAP40222 546 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 ZNF211Q13398 564 aaPredicted RBP6.17□□□□□ -1.42
VPS41-212ENST00000482217 C11orf91Q3C1V1 193 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 FAM177A1Q8N128 213 aaPredicted RBP6.17□□□□□ -1.42
VPS41-212ENST00000482217 NGLY1Q96IV0 654 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 SAP130Q9H0E3 1048 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 STIM2Q9P246 746 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 USP35Q9P2H5 1018 aa6.17□□□□□ -1.42
VPS41-212ENST00000482217 GPR25O00155 361 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 MX2P20592 715 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 ATP4AP20648 1035 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 MAP2K3P46734 347 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 CCDC27Q2M243 656 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 ABTB2Q8N961 1025 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 C7orf43Q8WVR3 580 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 AIDAQ96BJ3 306 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 RUBCNLQ9H714 662 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 ANO2Q9NQ90 1003 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 LRRC4BQ9NT99 713 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 LRFN2Q9ULH4 789 aa6.16□□□□□ -1.42
VPS41-212ENST00000482217 ATXN7L1Q9ULK2 861 aaPredicted RBP6.16□□□□□ -1.42
VPS41-212ENST00000482217 TNFRSF10BO14763 440 aa6.15□□□□□ -1.42
VPS41-212ENST00000482217 THBS1P07996 1170 aa6.15□□□□□ -1.42
VPS41-212ENST00000482217 UBAP2LQ14157 1087 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms