RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 HLFQ16534 295 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 CNBD1Q8NA66 436 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 C7orf43Q8WVR3 580 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 TRIM35Q9UPQ4 493 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 ZC3H4Q9UPT8 1303 aaKnown RBP12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 BCORQ6W2J9 1755 aa12.81□□□□□ -0.36
TMEM39A-207ENST00000482162 SBF1O95248 1867 aa12.8□□□□□ -0.36
TMEM39A-207ENST00000482162 NFKBIEO00221 500 aa12.8□□□□□ -0.36
TMEM39A-207ENST00000482162 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
TMEM39A-207ENST00000482162 PDIA6Q15084 440 aa12.8□□□□□ -0.36
TMEM39A-207ENST00000482162 CCDC24Q8N4L8 307 aa12.8□□□□□ -0.36
TMEM39A-207ENST00000482162 RUNDC1Q96C34 613 aa12.8□□□□□ -0.36
TMEM39A-207ENST00000482162 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
TMEM39A-207ENST00000482162 LMNB1P20700 586 aa12.79□□□□□ -0.36
TMEM39A-207ENST00000482162 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
TMEM39A-207ENST00000482162 TSPYL4Q9UJ04 414 aa12.79□□□□□ -0.36
TMEM39A-207ENST00000482162 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM39A-207ENST00000482162 MAP3K15Q6ZN16 1313 aa12.79□□□□□ -0.36
TMEM39A-207ENST00000482162 ST5P78524 1137 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 TTLL7Q6ZT98 887 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 CNKSR1Q969H4 720 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 RNF181Q9P0P0 153 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 LTBP3Q9NS15 1303 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 LAMB4A4D0S4 1761 aa12.78□□□□□ -0.36
TMEM39A-207ENST00000482162 TOMM70O94826 608 aa12.77□□□□□ -0.37
TMEM39A-207ENST00000482162 RASSF7Q02833 373 aa12.77□□□□□ -0.37
TMEM39A-207ENST00000482162 CCDC146Q8IYE0 955 aa12.77□□□□□ -0.37
TMEM39A-207ENST00000482162 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
TMEM39A-207ENST00000482162 ZNF622Q969S3 477 aaKnown RBP eCLIP12.77□□□□□ -0.37
TMEM39A-207ENST00000482162 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
TMEM39A-207ENST00000482162 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.37
TMEM39A-207ENST00000482162 NPR1P16066 1061 aa12.76□□□□□ -0.37
TMEM39A-207ENST00000482162 CRY2Q49AN0 593 aa12.76□□□□□ -0.37
TMEM39A-207ENST00000482162 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
TMEM39A-207ENST00000482162 C21orf2O43822 256 aa12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 ZNF853P0CG23 659 aa12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 COL11A2P13942 1736 aaPredicted RBP12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 HSPA6P17066 643 aa12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 WDR43Q15061 677 aaKnown RBP eCLIP12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 KDM2BQ8NHM5 1336 aa12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 IBTKQ9P2D0 1353 aaPredicted RBP12.75□□□□□ -0.37
TMEM39A-207ENST00000482162 SLX4Q8IY92 1834 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 RIC1Q4ADV7 1423 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 UBN2Q6ZU65 1347 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 MYL6BP14649 208 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 HOXA10P31260 410 aaPredicted RBP12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 NGEFQ8N5V2 710 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 RBM46Q8TBY0 533 aaKnown RBP12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 NYXQ9GZU5 481 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 FER1L6Q2WGJ9 1857 aa12.74□□□□□ -0.37
TMEM39A-207ENST00000482162 HOXB7P09629 217 aa12.73□□□□□ -0.37
TMEM39A-207ENST00000482162 SLC10A5Q5PT55 438 aa12.73□□□□□ -0.37
TMEM39A-207ENST00000482162 SUSD4Q5VX71 490 aa12.73□□□□□ -0.37
TMEM39A-207ENST00000482162 KIF6Q6ZMV9 814 aa12.73□□□□□ -0.37
TMEM39A-207ENST00000482162 DDX21Q9NR30 783 aaKnown RBP eCLIP12.73□□□□□ -0.37
TMEM39A-207ENST00000482162 NUP98P52948 1817 aa12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 POTECB2RU33 542 aa12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 NPHP1O15259 732 aa12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 NEUROD2Q15784 382 aa12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
TMEM39A-207ENST00000482162 SNED1Q8TER0 1413 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 ABCC12Q96J65 1359 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 APAF1O14727 1248 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 NTSR2O95665 410 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 ALDH1B1P30837 517 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 ERFEQ4G0M1 354 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 COPS6Q7L5N1 327 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 RRAGCQ9HB90 399 aa12.71□□□□□ -0.37
TMEM39A-207ENST00000482162 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.38
TMEM39A-207ENST00000482162 ANXA1P04083 346 aa12.7□□□□□ -0.38
TMEM39A-207ENST00000482162 VEGFAP15692 232 aaPredicted RBP12.7□□□□□ -0.38
TMEM39A-207ENST00000482162 GPTP24298 496 aa12.7□□□□□ -0.38
TMEM39A-207ENST00000482162 FSTL1Q12841 308 aa12.7□□□□□ -0.38
TMEM39A-207ENST00000482162 CCDC184Q52MB2 194 aa12.7□□□□□ -0.38
TMEM39A-207ENST00000482162 NUTM1Q86Y26 1132 aa12.7□□□□□ -0.38
TMEM39A-207ENST00000482162 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 TCIRG1Q13488 830 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 IFFO2Q5TF58 517 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 DNAJC5GQ8N7S2 189 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 XAGE3Q8WTP9 111 aa12.69□□□□□ -0.38
TMEM39A-207ENST00000482162 CRAMP1Q96RY5 1269 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms