RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 MAN1A2O60476 641 aa10.14□□□□□ -0.79
SF3B1-210ENST00000482158 RGS22Q8NE09 1264 aa10.14□□□□□ -0.79
SF3B1-210ENST00000482158 RHPN1Q8TCX5 695 aa10.14□□□□□ -0.79
SF3B1-210ENST00000482158 ZIC5Q96T25 663 aa10.14□□□□□ -0.79
SF3B1-210ENST00000482158 GMPR2Q9P2T1 348 aaKnown RBP10.14□□□□□ -0.79
SF3B1-210ENST00000482158 FAM13AO94988 1023 aa10.13□□□□□ -0.79
SF3B1-210ENST00000482158 ZNF280CQ8ND82 737 aa10.13□□□□□ -0.79
SF3B1-210ENST00000482158 IFT43Q96FT9 208 aa10.13□□□□□ -0.79
SF3B1-210ENST00000482158 TRIM47Q96LD4 638 aa10.13□□□□□ -0.79
SF3B1-210ENST00000482158 DYRK1BQ9Y463 629 aa10.13□□□□□ -0.79
SF3B1-210ENST00000482158 TATP17735 454 aaPredicted RBP10.12□□□□□ -0.79
SF3B1-210ENST00000482158 BRD2P25440 801 aaKnown RBP10.12□□□□□ -0.79
SF3B1-210ENST00000482158 EIF1AXP47813 144 aaKnown RBP10.12□□□□□ -0.79
SF3B1-210ENST00000482158 DNAJC14Q6Y2X3 702 aaPredicted RBP10.12□□□□□ -0.79
SF3B1-210ENST00000482158 SUSD3Q96L08 255 aa10.12□□□□□ -0.79
SF3B1-210ENST00000482158 GPC6Q9Y625 555 aaPredicted RBP10.12□□□□□ -0.79
SF3B1-210ENST00000482158 SLC35F4A4IF30 521 aa10.11□□□□□ -0.79
SF3B1-210ENST00000482158 HSH2DQ96JZ2 352 aa10.11□□□□□ -0.79
SF3B1-210ENST00000482158 DMGDHQ9UI17 866 aaKnown RBP10.11□□□□□ -0.79
SF3B1-210ENST00000482158 FZD6O60353 706 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 THBS1P07996 1170 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 PTSQ03393 145 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 ATCAYQ86WG3 371 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 RUBCNLQ9H714 662 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 SENP2Q9HC62 589 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 GPAMQ9HCL2 828 aa10.1□□□□□ -0.79
SF3B1-210ENST00000482158 A0A1W2PNR3 127 aa10.09□□□□□ -0.79
SF3B1-210ENST00000482158 F11P03951 625 aa10.09□□□□□ -0.79
SF3B1-210ENST00000482158 SNRPBP14678 240 aaKnown RBP10.09□□□□□ -0.79
SF3B1-210ENST00000482158 MARSP56192 900 aaKnown RBP10.09□□□□□ -0.79
SF3B1-210ENST00000482158 Q6ZNB5 142 aa10.09□□□□□ -0.79
SF3B1-210ENST00000482158 BICDL1Q6ZP65 573 aa10.09□□□□□ -0.79
SF3B1-210ENST00000482158 ABTB2Q8N961 1025 aa10.09□□□□□ -0.79
SF3B1-210ENST00000482158 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
SF3B1-210ENST00000482158 TGFBR3LH3BV60 316 aa10.08□□□□□ -0.8
SF3B1-210ENST00000482158 ARSJQ5FYB0 599 aaPredicted RBP10.08□□□□□ -0.8
SF3B1-210ENST00000482158 TREML1Q86YW5 311 aa10.08□□□□□ -0.8
SF3B1-210ENST00000482158 GAS2L1Q99501 681 aaPredicted RBP10.08□□□□□ -0.8
SF3B1-210ENST00000482158 CCDC87Q9NVE4 849 aa10.08□□□□□ -0.8
SF3B1-210ENST00000482158 OPLAHO14841 1288 aa10.07□□□□□ -0.8
SF3B1-210ENST00000482158 MICAL2O94851 1124 aa10.07□□□□□ -0.8
SF3B1-210ENST00000482158 IER5Q5VY09 327 aa10.07□□□□□ -0.8
SF3B1-210ENST00000482158 LRRC69Q6ZNQ3 347 aa10.07□□□□□ -0.8
SF3B1-210ENST00000482158 DCTN4Q9UJW0 460 aa10.07□□□□□ -0.8
SF3B1-210ENST00000482158 POTECB2RU33 542 aa10.06□□□□□ -0.8
SF3B1-210ENST00000482158 ZAP70P43403 619 aa10.06□□□□□ -0.8
SF3B1-210ENST00000482158 ALKBH2Q6NS38 261 aa10.06□□□□□ -0.8
SF3B1-210ENST00000482158 CUEDC1Q9NWM3 386 aaPredicted RBP10.06□□□□□ -0.8
SF3B1-210ENST00000482158 MAPK1P28482 360 aa10.05□□□□□ -0.8
SF3B1-210ENST00000482158 HIF1AQ16665 826 aa10.05□□□□□ -0.8
SF3B1-210ENST00000482158 CCDC155Q8N6L0 562 aa10.05□□□□□ -0.8
SF3B1-210ENST00000482158 ANKIB1Q9P2G1 1089 aa10.05□□□□□ -0.8
SF3B1-210ENST00000482158 GRNP28799 593 aaKnown RBP10.04□□□□□ -0.8
SF3B1-210ENST00000482158 UBAP2LQ14157 1087 aaKnown RBP10.04□□□□□ -0.8
SF3B1-210ENST00000482158 BTLAQ7Z6A9 289 aa10.04□□□□□ -0.8
SF3B1-210ENST00000482158 IGHA2P01877 340 aa10.03□□□□□ -0.8
SF3B1-210ENST00000482158 INPP5BP32019 993 aa10.03□□□□□ -0.8
SF3B1-210ENST00000482158 IDH3AP50213 366 aa10.03□□□□□ -0.8
SF3B1-210ENST00000482158 DBN1Q16643 649 aa10.03□□□□□ -0.8
SF3B1-210ENST00000482158 NLRP8Q86W28 1048 aa10.03□□□□□ -0.8
SF3B1-210ENST00000482158 RBCK1Q9BYM8 510 aa10.03□□□□□ -0.8
SF3B1-210ENST00000482158 POLIQ9UNA4 740 aa10.03□□□□□ -0.8
SF3B1-210ENST00000482158 PDGFAP04085 211 aa10.02□□□□□ -0.81
SF3B1-210ENST00000482158 PGBD3Q8N328 593 aa10.02□□□□□ -0.81
SF3B1-210ENST00000482158 FOXD4L4Q8WXT5 416 aaPredicted RBP10.02□□□□□ -0.81
SF3B1-210ENST00000482158 EDEM1Q92611 657 aa10.02□□□□□ -0.81
SF3B1-210ENST00000482158 ASB16Q96NS5 453 aa10.02□□□□□ -0.81
SF3B1-210ENST00000482158 ANKRD33BA6NCL7 494 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 C11orf95C9JLR9 678 aaPredicted RBP10.01□□□□□ -0.81
SF3B1-210ENST00000482158 MZF1P28698 734 aaPredicted RBP10.01□□□□□ -0.81
SF3B1-210ENST00000482158 TYRO3Q06418 890 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 AAMPQ13685 434 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 SAMD5Q5TGI4 173 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 RIPOR1Q6ZS17 1223 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 GPR152Q8TDT2 470 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 ZCCHC2Q9C0B9 1178 aaKnown RBP10.01□□□□□ -0.81
SF3B1-210ENST00000482158 NEUROD4Q9HD90 331 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 HCN2Q9UL51 889 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 BRPF3Q9ULD4 1205 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 USP20Q9Y2K6 914 aa10.01□□□□□ -0.81
SF3B1-210ENST00000482158 NDUFB5O43674 189 aa10□□□□□ -0.81
SF3B1-210ENST00000482158 DNM1Q05193 864 aaKnown RBP10□□□□□ -0.81
SF3B1-210ENST00000482158 LBRQ14739 615 aaKnown RBP10□□□□□ -0.81
SF3B1-210ENST00000482158 TMC7Q7Z402 723 aa10□□□□□ -0.81
SF3B1-210ENST00000482158 NPAS4Q8IUM7 802 aa10□□□□□ -0.81
SF3B1-210ENST00000482158 GJD3Q8N144 294 aa10□□□□□ -0.81
SF3B1-210ENST00000482158 ITGA6P23229 1130 aa9.99□□□□□ -0.81
SF3B1-210ENST00000482158 TRIM22Q8IYM9 498 aa9.99□□□□□ -0.81
SF3B1-210ENST00000482158 RGL4Q8IZJ4 473 aa9.99□□□□□ -0.81
SF3B1-210ENST00000482158 CITED4Q96RK1 184 aa9.99□□□□□ -0.81
SF3B1-210ENST00000482158 FAM129BQ96TA1 746 aa9.99□□□□□ -0.81
SF3B1-210ENST00000482158 NUCKS1Q9H1E3 243 aaKnown RBP9.99□□□□□ -0.81
SF3B1-210ENST00000482158 GGNBP2Q9H3C7 697 aa9.99□□□□□ -0.81
SF3B1-210ENST00000482158 ARSDP51689 593 aa9.98□□□□□ -0.81
SF3B1-210ENST00000482158 EFHC2Q5JST6 749 aa9.98□□□□□ -0.81
SF3B1-210ENST00000482158 NUDT16Q96DE0 195 aaKnown RBP9.98□□□□□ -0.81
SF3B1-210ENST00000482158 CEP63Q96MT8 703 aa9.98□□□□□ -0.81
SF3B1-210ENST00000482158 NDFIP2Q9NV92 336 aa9.98□□□□□ -0.81
SF3B1-210ENST00000482158 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms