RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 ZSCAN22P10073 491 aaPredicted RBP10.44□□□□□ -0.74
PKP4-210ENST00000480171 EIF2S2P20042 333 aaKnown RBP10.44□□□□□ -0.74
PKP4-210ENST00000480171 FOXD4L6Q3SYB3 417 aaPredicted RBP10.44□□□□□ -0.74
PKP4-210ENST00000480171 FOXD4L3Q6VB84 417 aaPredicted RBP10.44□□□□□ -0.74
PKP4-210ENST00000480171 SMC3Q9UQE7 1217 aa10.44□□□□□ -0.74
PKP4-210ENST00000480171 TTC41PQ6P2S7 1318 aa10.44□□□□□ -0.74
PKP4-210ENST00000480171 GADD45BO75293 160 aaPredicted RBP10.44□□□□□ -0.74
PKP4-210ENST00000480171 GLRX3O76003 335 aaKnown RBP10.44□□□□□ -0.74
PKP4-210ENST00000480171 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
PKP4-210ENST00000480171 DNAAF4Q8WXU2 420 aa10.44□□□□□ -0.74
PKP4-210ENST00000480171 MAP7D2Q96T17 732 aa10.44□□□□□ -0.74
PKP4-210ENST00000480171 DIAPH3Q9NSV4 1193 aa10.44□□□□□ -0.74
PKP4-210ENST00000480171 NUTM2GQ5VZR2 741 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 GPATCH3Q96I76 525 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 LSG1Q9H089 658 aaKnown RBP10.43□□□□□ -0.74
PKP4-210ENST00000480171 GDPD2Q9HCC8 539 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 RGPD8O14715 1765 aaPredicted RBP10.43□□□□□ -0.74
PKP4-210ENST00000480171 STX6O43752 255 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 AK2P54819 239 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 UBE2HP62256 183 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 TTC14Q96N46 770 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 NAP1L2Q9ULW6 460 aaPredicted RBP10.43□□□□□ -0.74
PKP4-210ENST00000480171 NWD1Q149M9 1564 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 USP42Q9H9J4 1324 aaKnown RBP10.43□□□□□ -0.74
PKP4-210ENST00000480171 KIAA2012Q0VF49 1180 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 CLASRPQ8N2M8 674 aaKnown RBP10.43□□□□□ -0.74
PKP4-210ENST00000480171 ZSCAN31Q96LW9 406 aaPredicted RBP10.43□□□□□ -0.74
PKP4-210ENST00000480171 IL25Q9H293 177 aa10.43□□□□□ -0.74
PKP4-210ENST00000480171 SLIT1O75093 1534 aa10.42□□□□□ -0.74
PKP4-210ENST00000480171 RPAP1Q9BWH6 1393 aaPredicted RBP10.42□□□□□ -0.74
PKP4-210ENST00000480171 EIF4A1P60842 406 aaKnown RBP10.42□□□□□ -0.74
PKP4-210ENST00000480171 BEND3Q5T5X7 828 aa10.42□□□□□ -0.74
PKP4-210ENST00000480171 CWC27Q6UX04 472 aaKnown RBP10.42□□□□□ -0.74
PKP4-210ENST00000480171 PI4KAP2A4QPH2 592 aa10.42□□□□□ -0.74
PKP4-210ENST00000480171 NBPF7P0C2Y1 421 aaPredicted RBP10.42□□□□□ -0.74
PKP4-210ENST00000480171 SASS6Q6UVJ0 657 aa10.42□□□□□ -0.74
PKP4-210ENST00000480171 ERC1Q8IUD2 1116 aa10.42□□□□□ -0.74
PKP4-210ENST00000480171 PI4KAP1Q8N8J0 262 aa10.42□□□□□ -0.74
PKP4-210ENST00000480171 ARHGAP23Q9P227 1491 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 CEMIPQ8WUJ3 1361 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 F13A1P00488 732 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 CASTP20810 708 aaKnown RBP10.41□□□□□ -0.74
PKP4-210ENST00000480171 SYT1P21579 422 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 TEFQ10587 303 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 THEMISQ8N1K5 641 aaPredicted RBP10.41□□□□□ -0.74
PKP4-210ENST00000480171 SH2B1Q9NRF2 756 aaPredicted RBP10.41□□□□□ -0.74
PKP4-210ENST00000480171 CHPF2Q9P2E5 772 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 CNPY2Q9Y2B0 182 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 USP54Q70EL1 1684 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 UQCRHLA0A096LP55 91 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 CLSTN1O94985 981 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 UQCRHP07919 91 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 USHBP1Q8N6Y0 703 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 RGS22Q8NE09 1264 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 TM6SF1Q9BZW5 370 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 PDRG1Q9NUG6 133 aa10.41□□□□□ -0.74
PKP4-210ENST00000480171 IFIT2P09913 472 aaKnown RBP10.4□□□□□ -0.74
PKP4-210ENST00000480171 CEBPAP49715 358 aaPredicted RBP10.4□□□□□ -0.74
PKP4-210ENST00000480171 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 MTERF4Q7Z6M4 381 aaKnown RBP10.4□□□□□ -0.74
PKP4-210ENST00000480171 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 IP6K1Q92551 441 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 ECHDC1Q9NTX5 307 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 SPG7Q9UQ90 795 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 CYP46A1Q9Y6A2 500 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 DYNC1I1O14576 645 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 ALDH1L1O75891 902 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 ZKSCAN1P17029 563 aaPredicted RBP10.4□□□□□ -0.74
PKP4-210ENST00000480171 MTX1Q13505 466 aa10.4□□□□□ -0.74
PKP4-210ENST00000480171 C9orf78Q9NZ63 289 aaPredicted RBP10.4□□□□□ -0.74
PKP4-210ENST00000480171 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.4□□□□□ -0.745e-6■■■■□ 19.3
PKP4-210ENST00000480171 HIP1O00291 1037 aa10.39□□□□□ -0.75
PKP4-210ENST00000480171 DBF4Q9UBU7 674 aaPredicted RBP10.39□□□□□ -0.75
PKP4-210ENST00000480171 BTBD11A6QL63 1104 aa10.39□□□□□ -0.75
PKP4-210ENST00000480171 FIBPO43427 364 aa10.39□□□□□ -0.75
PKP4-210ENST00000480171 PLEKHO1Q53GL0 409 aaPredicted RBP10.39□□□□□ -0.75
PKP4-210ENST00000480171 AKAP4Q5JQC9 854 aa10.39□□□□□ -0.75
PKP4-210ENST00000480171 DNTTIP2Q5QJE6 756 aaKnown RBP10.39□□□□□ -0.75
PKP4-210ENST00000480171 EVI5LQ96CN4 794 aa10.39□□□□□ -0.75
PKP4-210ENST00000480171 JAKMIP1Q96N16 626 aaKnown RBP10.39□□□□□ -0.75
PKP4-210ENST00000480171 HYPKQ9NX55 129 aa10.39□□□□□ -0.75
PKP4-210ENST00000480171 GJB2P29033 226 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 CCDC83Q8IWF9 413 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 FAM13BQ9NYF5 915 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 KIF13AQ9H1H9 1805 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 KCNJ4P48050 445 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 PRPF40BQ6NWY9 871 aaKnown RBP10.38□□□□□ -0.75
PKP4-210ENST00000480171 SECISBP2LQ93073 1101 aaKnown RBP10.38□□□□□ -0.75
PKP4-210ENST00000480171 LGR6Q9HBX8 967 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 USP25Q9UHP3 1055 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
PKP4-210ENST00000480171 TCHHQ07283 1943 aa10.38□□□□□ -0.75
PKP4-210ENST00000480171 MED1Q15648 1581 aaPredicted RBP10.38□□□□□ -0.75
PKP4-210ENST00000480171 CRYBG1Q9Y4K1 1723 aa10.37□□□□□ -0.75
PKP4-210ENST00000480171 ADCY5O95622 1261 aa10.37□□□□□ -0.75
PKP4-210ENST00000480171 ZNF530Q6P9A1 599 aaPredicted RBP10.37□□□□□ -0.75
PKP4-210ENST00000480171 KCNB2Q92953 911 aa10.37□□□□□ -0.75
PKP4-210ENST00000480171 LARP6Q9BRS8 491 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms