RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 HOXB3P14651 431 aaPredicted RBP5.71□□□□□ -1.5
POLR2B-208ENST00000478188 HOXB1P14653 301 aaPredicted RBP5.71□□□□□ -1.5
POLR2B-208ENST00000478188 PRKAR2BP31323 418 aa5.71□□□□□ -1.5
POLR2B-208ENST00000478188 RALBP1Q15311 655 aa5.71□□□□□ -1.5
POLR2B-208ENST00000478188 SMIM5Q71RC9 77 aa5.71□□□□□ -1.5
POLR2B-208ENST00000478188 JMYQ8N9B5 988 aa5.71□□□□□ -1.5
POLR2B-208ENST00000478188 BBXQ8WY36 941 aaPredicted RBP5.71□□□□□ -1.5
POLR2B-208ENST00000478188 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
POLR2B-208ENST00000478188 C10orf71Q711Q0 1435 aa5.71□□□□□ -1.5
POLR2B-208ENST00000478188 RC3H1Q5TC82 1133 aaKnown RBP5.71□□□□□ -1.5
POLR2B-208ENST00000478188 SPNS2Q8IVW8 549 aa5.71□□□□□ -1.5
POLR2B-208ENST00000478188 PRKRIP1Q9H875 184 aaPredicted RBP5.71□□□□□ -1.5
POLR2B-208ENST00000478188 FCHSD2O94868 740 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 ZBTB7AO95365 584 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 HSPA6P17066 643 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 DDX10Q13206 875 aaKnown RBP5.7□□□□□ -1.5
POLR2B-208ENST00000478188 INTS5Q6P9B9 1019 aaKnown RBP5.7□□□□□ -1.5
POLR2B-208ENST00000478188 NFATC2IPQ8NCF5 419 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 NUP98P52948 1817 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 SSFA2P28290 1259 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 SLC16A10Q8TF71 515 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 SPON1Q9HCB6 807 aa5.7□□□□□ -1.5
POLR2B-208ENST00000478188 ADCY9O60503 1353 aa5.69□□□□□ -1.5
POLR2B-208ENST00000478188 ZEB1P37275 1124 aaPredicted RBP5.69□□□□□ -1.5
POLR2B-208ENST00000478188 ZSWIM6Q9HCJ5 1215 aa5.69□□□□□ -1.5
POLR2B-208ENST00000478188 TNRC6CQ9HCJ0 1690 aaKnown RBP5.69□□□□□ -1.5
POLR2B-208ENST00000478188 SOS1Q07889 1333 aaPredicted RBP5.69□□□□□ -1.5
POLR2B-208ENST00000478188 MMRN1Q13201 1228 aa5.69□□□□□ -1.5
POLR2B-208ENST00000478188 C1orf141Q5JVX7 400 aa5.69□□□□□ -1.5
POLR2B-208ENST00000478188 GAS2L2Q8NHY3 880 aa5.69□□□□□ -1.5
POLR2B-208ENST00000478188 LAMB2P55268 1798 aa5.69□□□□□ -1.5
POLR2B-208ENST00000478188 GNAT3A8MTJ3 354 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 CYP19A1P11511 503 aaPredicted RBP5.68□□□□□ -1.5
POLR2B-208ENST00000478188 CABP4P57796 275 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 MS4A4AQ96JQ5 239 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 CFAP53Q96M91 514 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 PXDNLA1KZ92 1463 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 U2SURPO15042 1029 aaKnown RBP5.68□□□□□ -1.5
POLR2B-208ENST00000478188 KCNQ3O43525 872 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 HTATSF1O43719 755 aaKnown RBP5.68□□□□□ -1.5
POLR2B-208ENST00000478188 CCDC184Q52MB2 194 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 VSIG10Q8N0Z9 540 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 ATP6V1AP38606 617 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 SLC39A6Q13433 755 aa5.68□□□□□ -1.5
POLR2B-208ENST00000478188 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.68□□□□□ -1.5
POLR2B-208ENST00000478188 UTRNP46939 3433 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 RPS6KA4O75676 772 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 CRKLP46109 303 aaKnown RBP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 DNAJC10Q8IXB1 793 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 BCL2L12Q9HB09 334 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 SBF1O95248 1867 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 U2AF1L5P0DN76 240 aaPredicted RBP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 U2AF1Q01081 240 aaKnown RBP eCLIP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 CNGB1Q14028 1251 aaPredicted RBP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 NFE2L2Q16236 605 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 ZNF496Q96IT1 587 aaPredicted RBP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 FHDC1Q9C0D6 1143 aaPredicted RBP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 CACNA1SQ13698 1873 aa5.67□□□□□ -1.5
POLR2B-208ENST00000478188 USP42Q9H9J4 1324 aaKnown RBP5.67□□□□□ -1.5
POLR2B-208ENST00000478188 GYS1P13807 737 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 ZNF790Q6PG37 636 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 MCM10Q7L590 875 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 FLAD1Q8NFF5 587 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 DDX60Q8IY21 1712 aaKnown RBP5.66□□□□□ -1.5
POLR2B-208ENST00000478188 COL15A1P39059 1388 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 GNPATO15228 680 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 DCTN1Q14203 1278 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 LRP10Q7Z4F1 713 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 ARHGEF1Q92888 912 aaKnown RBP5.66□□□□□ -1.5
POLR2B-208ENST00000478188 ARXQ96QS3 562 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 SYT17Q9BSW7 474 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 MFRPQ9BY79 579 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 NUDCQ9Y266 331 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 PRAMEF22A3QJZ6 481 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 ZNF316A6NFI3 1004 aaPredicted RBP5.66□□□□□ -1.5
POLR2B-208ENST00000478188 APLP1P51693 650 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 NLGN2Q8NFZ4 835 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 AK7Q96M32 723 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 ZBTB1Q9Y2K1 713 aa5.66□□□□□ -1.5
POLR2B-208ENST00000478188 FER1L6Q2WGJ9 1857 aa5.65□□□□□ -1.5
POLR2B-208ENST00000478188 POTEB3A0JP26 581 aa5.65□□□□□ -1.5
POLR2B-208ENST00000478188 EIF5P55010 431 aaKnown RBP5.65□□□□□ -1.5
POLR2B-208ENST00000478188 DDR1Q08345 913 aa5.65□□□□□ -1.5
POLR2B-208ENST00000478188 MSL1Q68DK7 614 aa5.65□□□□□ -1.5
POLR2B-208ENST00000478188 POTEBQ6S5H4 581 aa5.65□□□□□ -1.5
POLR2B-208ENST00000478188 TMEM92Q6UXU6 159 aa5.65□□□□□ -1.5
POLR2B-208ENST00000478188 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.5
POLR2B-208ENST00000478188 GOLGB1Q14789 3259 aaKnown RBP5.65□□□□□ -1.5
POLR2B-208ENST00000478188 LRRC37AA6NMS7 1700 aa5.65□□□□□ -1.51
POLR2B-208ENST00000478188 TIAM2Q8IVF5 1701 aa5.65□□□□□ -1.51
POLR2B-208ENST00000478188 PTCD1O75127 700 aaKnown RBP5.65□□□□□ -1.51
POLR2B-208ENST00000478188 TM4SF1P30408 202 aa5.65□□□□□ -1.51
POLR2B-208ENST00000478188 DICER1Q9UPY3 1922 aaKnown RBP5.65□□□□□ -1.51
POLR2B-208ENST00000478188 CARMIL3Q8ND23 1372 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 TMPOP42166 694 aaKnown RBP5.64□□□□□ -1.51
POLR2B-208ENST00000478188 FBXO22Q8NEZ5 403 aa5.64□□□□□ -1.51
POLR2B-208ENST00000478188 SRP68Q9UHB9 627 aaKnown RBP5.64□□□□□ -1.51
POLR2B-208ENST00000478188 NBPF26B4DH59 902 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms