RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 CC2D1BQ5T0F9 858 aaKnown RBP7.51□□□□□ -1.21
TRA2B-211ENST00000477939 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
TRA2B-211ENST00000477939 LGR6Q9HBX8 967 aa7.51□□□□□ -1.21
TRA2B-211ENST00000477939 NOP58Q9Y2X3 529 aaKnown RBP7.51□□□□□ -1.21
TRA2B-211ENST00000477939 SOS1Q07889 1333 aaPredicted RBP7.51□□□□□ -1.21
TRA2B-211ENST00000477939 SCN7AQ01118 1682 aa7.51□□□□□ -1.21
TRA2B-211ENST00000477939 NPC1L1Q9UHC9 1359 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 PATL2C9JE40 543 aaKnown RBP7.5□□□□□ -1.21
TRA2B-211ENST00000477939 RNMTO43148 476 aaKnown RBP7.5□□□□□ -1.21
TRA2B-211ENST00000477939 APPP05067 770 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 DPEP1P16444 411 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 KCNA3P22001 575 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 SLC39A6Q13433 755 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 MTHFSDQ2M296 383 aaKnown RBP7.5□□□□□ -1.21
TRA2B-211ENST00000477939 DNAJC10Q8IXB1 793 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 RGS22Q8NE09 1264 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 CCDC87Q9NVE4 849 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 BCS1LQ9Y276 419 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 PARP3Q9Y6F1 533 aa7.5□□□□□ -1.21
TRA2B-211ENST00000477939 COL15A1P39059 1388 aa7.49□□□□□ -1.21
TRA2B-211ENST00000477939 POLRMTO00411 1230 aaKnown RBP7.49□□□□□ -1.21
TRA2B-211ENST00000477939 KIF3CO14782 793 aa7.49□□□□□ -1.21
TRA2B-211ENST00000477939 DIAPH1O60610 1272 aaKnown RBP7.49□□□□□ -1.21
TRA2B-211ENST00000477939 CYP19A1P11511 503 aaPredicted RBP7.49□□□□□ -1.21
TRA2B-211ENST00000477939 ZBTB1Q9Y2K1 713 aa7.49□□□□□ -1.21
TRA2B-211ENST00000477939 SBF1O95248 1867 aa7.49□□□□□ -1.21
TRA2B-211ENST00000477939 FCHSD2O94868 740 aa7.48□□□□□ -1.21
TRA2B-211ENST00000477939 COL11A2P13942 1736 aaPredicted RBP7.48□□□□□ -1.21
TRA2B-211ENST00000477939 SMAP1Q8IYB5 467 aaPredicted RBP7.48□□□□□ -1.21
TRA2B-211ENST00000477939 CARMIL3Q8ND23 1372 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 ANKRD31Q8N7Z5 1873 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 BCORQ6W2J9 1755 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 HSPA6P17066 643 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 TM4SF1P30408 202 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 CHRNA5P30532 468 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 NBR1Q14596 966 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 NBPF20Q3BBV1 942 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 UTP14CQ5TAP6 766 aaKnown RBP7.47□□□□□ -1.21
TRA2B-211ENST00000477939 USPL1Q5W0Q7 1092 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 BCL2L12Q9HB09 334 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 HDAC5Q9UQL6 1122 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 TNRC6CQ9HCJ0 1690 aaKnown RBP7.47□□□□□ -1.21
TRA2B-211ENST00000477939 TIAM2Q8IVF5 1701 aa7.47□□□□□ -1.21
TRA2B-211ENST00000477939 CEMIPQ8WUJ3 1361 aa7.46□□□□□ -1.21
TRA2B-211ENST00000477939 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
TRA2B-211ENST00000477939 ZPR1O75312 459 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 OS9Q13438 667 aaPredicted RBP7.46□□□□□ -1.22
TRA2B-211ENST00000477939 NFIXQ14938 502 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 HSP90AB4PQ58FF6 505 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 ARHGAP27Q6ZUM4 889 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 PRDM16Q9HAZ2 1276 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 NMRK2Q9NPI5 230 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 PIM2Q9P1W9 311 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 NARFQ9UHQ1 456 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 HEG1Q9ULI3 1381 aa7.46□□□□□ -1.22
TRA2B-211ENST00000477939 WDR90Q96KV7 1748 aa7.45□□□□□ -1.22
TRA2B-211ENST00000477939 DALRD3Q5D0E6 543 aaKnown RBP7.45□□□□□ -1.22
TRA2B-211ENST00000477939 C9orf131Q5VYM1 1079 aa7.45□□□□□ -1.22
TRA2B-211ENST00000477939 TMED8Q6PL24 325 aaPredicted RBP7.45□□□□□ -1.22
TRA2B-211ENST00000477939 CASC1Q6TDU7 716 aa7.45□□□□□ -1.22
TRA2B-211ENST00000477939 MTERF4Q7Z6M4 381 aaKnown RBP7.45□□□□□ -1.22
TRA2B-211ENST00000477939 IL17REQ8NFR9 667 aa7.45□□□□□ -1.22
TRA2B-211ENST00000477939 ZNF496Q96IT1 587 aaPredicted RBP7.45□□□□□ -1.22
TRA2B-211ENST00000477939 CWC22Q9HCG8 908 aaKnown RBP7.45□□□□□ -1.22
TRA2B-211ENST00000477939 GOLGA6L3A6NEY3 463 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 TTC36A6NLP5 189 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 GNAT3A8MTJ3 354 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 TPM2P07951 284 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 PRKAR2BP31323 418 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
TRA2B-211ENST00000477939 RASSF7Q02833 373 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 ZNF790Q6PG37 636 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 TTC5Q8N0Z6 440 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 GAS2L2Q8NHY3 880 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 PHACTR3Q96KR7 559 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 CACNA1SQ13698 1873 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 CCDC88AQ3V6T2 1871 aa7.44□□□□□ -1.22
TRA2B-211ENST00000477939 FER1L6Q2WGJ9 1857 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 TOMM70O94826 608 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 SERPINB2P05120 415 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 PRELPP51888 382 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 TEFQ10587 303 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 NBPF11Q86T75 865 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 RNF181Q9P0P0 153 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 KCNG1Q9UIX4 513 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 LAMB4A4D0S4 1761 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 ARFGEF2Q9Y6D5 1785 aa7.43□□□□□ -1.22
TRA2B-211ENST00000477939 DLG5Q8TDM6 1919 aa7.42□□□□□ -1.22
TRA2B-211ENST00000477939 KCNQ3O43525 872 aa7.42□□□□□ -1.22
TRA2B-211ENST00000477939 STARD3NLO95772 234 aa7.42□□□□□ -1.22
TRA2B-211ENST00000477939 CCDC27Q2M243 656 aa7.42□□□□□ -1.22
TRA2B-211ENST00000477939 TBC1D9BQ66K14 1250 aa7.42□□□□□ -1.22
TRA2B-211ENST00000477939 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
TRA2B-211ENST00000477939 FAM43BQ6ZT52 329 aaPredicted RBP7.42□□□□□ -1.22
TRA2B-211ENST00000477939 YY1AP1Q9H869 796 aa7.42□□□□□ -1.22
TRA2B-211ENST00000477939 ZNF330Q9Y3S2 320 aaPredicted RBP7.42□□□□□ -1.22
TRA2B-211ENST00000477939 KDM3BQ7LBC6 1761 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 DICER1Q9UPY3 1922 aaKnown RBP7.41□□□□□ -1.22
TRA2B-211ENST00000477939 NFKBIEO00221 500 aa7.41□□□□□ -1.22
TRA2B-211ENST00000477939 KIF20AO95235 890 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms