RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ITPK1Q13572 414 aa18.1■□□□□ 0.49
COL4A6-206ENST00000477085 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
COL4A6-206ENST00000477085 GCC1Q96CN9 775 aa18.09■□□□□ 0.49
COL4A6-206ENST00000477085 ZBTB1Q9Y2K1 713 aa18.09■□□□□ 0.49
COL4A6-206ENST00000477085 UTYO14607 1347 aa18.09■□□□□ 0.49
COL4A6-206ENST00000477085 ATP5J2-PTCD1G3V325 749 aa18.08■□□□□ 0.48
COL4A6-206ENST00000477085 ATP6V1AP38606 617 aa18.08■□□□□ 0.48
COL4A6-206ENST00000477085 GCKRQ14397 625 aa18.08■□□□□ 0.48
COL4A6-206ENST00000477085 INTS5Q6P9B9 1019 aaKnown RBP18.08■□□□□ 0.48
COL4A6-206ENST00000477085 KAZALD1Q96I82 304 aa18.08■□□□□ 0.48
COL4A6-206ENST00000477085 ZBTB3Q9H5J0 574 aa18.08■□□□□ 0.48
COL4A6-206ENST00000477085 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
COL4A6-206ENST00000477085 GRM8O00222 908 aa18.07■□□□□ 0.48
COL4A6-206ENST00000477085 IBTKQ9P2D0 1353 aaPredicted RBP18.07■□□□□ 0.48
COL4A6-206ENST00000477085 NEXNQ0ZGT2 675 aa18.07■□□□□ 0.48
COL4A6-206ENST00000477085 ANKRD45Q5TZF3 282 aa18.07■□□□□ 0.48
COL4A6-206ENST00000477085 CHD1LQ86WJ1 897 aa18.07■□□□□ 0.48
COL4A6-206ENST00000477085 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
COL4A6-206ENST00000477085 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
COL4A6-206ENST00000477085 LNPKQ9C0E8 428 aa18.06■□□□□ 0.48
COL4A6-206ENST00000477085 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
COL4A6-206ENST00000477085 NUP188Q5SRE5 1749 aa18.06■□□□□ 0.48
COL4A6-206ENST00000477085 KCNQ4P56696 695 aa18.05■□□□□ 0.48
COL4A6-206ENST00000477085 PPP1R42Q7Z4L9 355 aa18.05■□□□□ 0.48
COL4A6-206ENST00000477085 JARID2Q92833 1246 aaPredicted RBP18.05■□□□□ 0.48
COL4A6-206ENST00000477085 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
COL4A6-206ENST00000477085 NHSQ6T4R5 1651 aa18.04■□□□□ 0.48
COL4A6-206ENST00000477085 CRKLP46109 303 aaKnown RBP18.04■□□□□ 0.48
COL4A6-206ENST00000477085 POLA2Q14181 598 aa18.04■□□□□ 0.48
COL4A6-206ENST00000477085 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
COL4A6-206ENST00000477085 HMMRO75330 724 aa18.03■□□□□ 0.48
COL4A6-206ENST00000477085 HLFQ16534 295 aa18.03■□□□□ 0.48
COL4A6-206ENST00000477085 CICQ96RK0 1608 aaPredicted RBP18.03■□□□□ 0.48
COL4A6-206ENST00000477085 IL6STP40189 918 aaPredicted RBP18.02■□□□□ 0.48
COL4A6-206ENST00000477085 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
COL4A6-206ENST00000477085 CASP7P55210 303 aa18.02■□□□□ 0.48
COL4A6-206ENST00000477085 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.48
COL4A6-206ENST00000477085 ZNF772Q68DY9 489 aaPredicted RBP18.02■□□□□ 0.48
COL4A6-206ENST00000477085 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
COL4A6-206ENST00000477085 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.48
COL4A6-206ENST00000477085 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.48
COL4A6-206ENST00000477085 BTAF1O14981 1849 aa18.02■□□□□ 0.47
COL4A6-206ENST00000477085 MTX1Q13505 466 aa18.02■□□□□ 0.47
COL4A6-206ENST00000477085 ISCA1Q9BUE6 129 aa18.02■□□□□ 0.47
COL4A6-206ENST00000477085 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.47
COL4A6-206ENST00000477085 SRGAP3O43295 1099 aa18.01■□□□□ 0.47
COL4A6-206ENST00000477085 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
COL4A6-206ENST00000477085 TCIRG1Q13488 830 aa18.01■□□□□ 0.47
COL4A6-206ENST00000477085 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
COL4A6-206ENST00000477085 BICC1Q9H694 974 aaKnown RBP18.01■□□□□ 0.47
COL4A6-206ENST00000477085 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
COL4A6-206ENST00000477085 RREB1Q92766 1687 aa18.01■□□□□ 0.47
COL4A6-206ENST00000477085 EP400Q96L91 3159 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 A0A087WZG4 1122 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 H7C1W4 665 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 APBB1O00213 710 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
COL4A6-206ENST00000477085 KRT27Q7Z3Y8 459 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 BACH2Q9BYV9 841 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 RBM19Q9Y4C8 960 aaKnown RBP18■□□□□ 0.47
COL4A6-206ENST00000477085 SBF2Q86WG5 1849 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 BRWD3Q6RI45 1802 aa18■□□□□ 0.47
COL4A6-206ENST00000477085 ZNF831Q5JPB2 1677 aa17.99■□□□□ 0.47
COL4A6-206ENST00000477085 KIF6Q6ZMV9 814 aa17.99■□□□□ 0.47
COL4A6-206ENST00000477085 UBE3BQ7Z3V4 1068 aa17.99■□□□□ 0.47
COL4A6-206ENST00000477085 FBXO41Q8TF61 875 aa17.99■□□□□ 0.47
COL4A6-206ENST00000477085 ARXQ96QS3 562 aa17.99■□□□□ 0.47
COL4A6-206ENST00000477085 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
COL4A6-206ENST00000477085 MYH14Q7Z406 1995 aaKnown RBP17.99■□□□□ 0.47
COL4A6-206ENST00000477085 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
COL4A6-206ENST00000477085 GIGYF2Q6Y7W6 1299 aaKnown RBP17.99■□□□□ 0.47
COL4A6-206ENST00000477085 CWC25Q9NXE8 425 aaPredicted RBP17.99■□□□□ 0.47
COL4A6-206ENST00000477085 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
COL4A6-206ENST00000477085 AFDNP55196 1824 aaKnown RBP17.98■□□□□ 0.47
COL4A6-206ENST00000477085 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
COL4A6-206ENST00000477085 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
COL4A6-206ENST00000477085 CCDC191Q8NCU4 936 aa17.98■□□□□ 0.47
COL4A6-206ENST00000477085 OTUD7AQ8TE49 926 aaPredicted RBP17.98■□□□□ 0.47
COL4A6-206ENST00000477085 BCL11BQ9C0K0 894 aaPredicted RBP17.98■□□□□ 0.47
COL4A6-206ENST00000477085 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
COL4A6-206ENST00000477085 SMIM5Q71RC9 77 aa17.96■□□□□ 0.47
COL4A6-206ENST00000477085 COL15A1P39059 1388 aa17.96■□□□□ 0.47
COL4A6-206ENST00000477085 ERVV-1B6SEH8 477 aa17.96■□□□□ 0.47
COL4A6-206ENST00000477085 FAM196AQ6ZSG2 479 aa17.96■□□□□ 0.47
COL4A6-206ENST00000477085 HDAC5Q9UQL6 1122 aa17.96■□□□□ 0.47
COL4A6-206ENST00000477085 SURF6O75683 361 aaKnown RBP17.95■□□□□ 0.46
COL4A6-206ENST00000477085 FOXO4P98177 505 aa17.95■□□□□ 0.46
COL4A6-206ENST00000477085 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
COL4A6-206ENST00000477085 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
COL4A6-206ENST00000477085 PLEKHM2Q8IWE5 1019 aa17.95■□□□□ 0.46
COL4A6-206ENST00000477085 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
COL4A6-206ENST00000477085 CAMTA2O94983 1202 aa17.94■□□□□ 0.46
COL4A6-206ENST00000477085 CCNL1Q9UK58 526 aaPredicted RBP17.94■□□□□ 0.46
COL4A6-206ENST00000477085 PA2G4Q9UQ80 394 aaKnown RBP17.94■□□□□ 0.46
COL4A6-206ENST00000477085 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
COL4A6-206ENST00000477085 CNTNAP4Q9C0A0 1308 aa17.94■□□□□ 0.46
COL4A6-206ENST00000477085 GPTP24298 496 aa17.94■□□□□ 0.46
COL4A6-206ENST00000477085 NLRP10Q86W26 655 aa17.94■□□□□ 0.46
COL4A6-206ENST00000477085 TRIM37O94972 964 aa17.93■□□□□ 0.46
COL4A6-206ENST00000477085 RXRBP28702 533 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms