RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 LIMCH1Q9UPQ0 1083 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 FCHSD2O94868 740 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 ACTN2P35609 894 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 CAMK4Q16566 473 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 REXO1L1PQ8IX06 675 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 CEP83Q9Y592 693 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 PLCH2O75038 1416 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 TTC21BQ7Z4L5 1316 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 ADGRF5Q8IZF2 1346 aa16.28■□□□□ 0.2
HDAC1-206ENST00000476391 CCDC172P0C7W6 258 aa16.27■□□□□ 0.2
HDAC1-206ENST00000476391 KRT85P78386 507 aa16.27■□□□□ 0.2
HDAC1-206ENST00000476391 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.2
HDAC1-206ENST00000476391 ASXL2Q76L83 1435 aa16.27■□□□□ 0.2
HDAC1-206ENST00000476391 HMMRO75330 724 aa16.27■□□□□ 0.19
HDAC1-206ENST00000476391 LIG1P18858 919 aa16.27■□□□□ 0.19
HDAC1-206ENST00000476391 SMC1AQ14683 1233 aaKnown RBP16.27■□□□□ 0.19
HDAC1-206ENST00000476391 CDC42BPGQ6DT37 1551 aa16.27■□□□□ 0.19
HDAC1-206ENST00000476391 TTC14Q96N46 770 aa16.27■□□□□ 0.19
HDAC1-206ENST00000476391 SRRTQ9BXP5 876 aaKnown RBP16.27■□□□□ 0.19
HDAC1-206ENST00000476391 ARHGAP5Q13017 1502 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 APBB1O00213 710 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 GSDMDP57764 484 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 FBLN2P98095 1184 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 CKAP2LQ8IYA6 745 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 TET3O43151 1660 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 CHD1O14646 1710 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 GLI2P10070 1586 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 GOLGA6L19H0YKK7 550 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 SUGP1Q8IWZ8 645 aaKnown RBP16.26■□□□□ 0.19
HDAC1-206ENST00000476391 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
HDAC1-206ENST00000476391 DIAPH1O60610 1272 aaKnown RBP16.25■□□□□ 0.19
HDAC1-206ENST00000476391 KCNJ6P48051 423 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 ARID5BQ14865 1188 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 SWT1Q5T5J6 900 aaKnown RBP16.25■□□□□ 0.19
HDAC1-206ENST00000476391 PACS2Q86VP3 889 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 DACT1Q9NYF0 836 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 SALL3Q9BXA9 1300 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 ABCA9Q8IUA7 1624 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 LRRC7Q96NW7 1537 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 PSDA5PKW4 1024 aaPredicted RBP16.25■□□□□ 0.19
HDAC1-206ENST00000476391 ZNF853P0CG23 659 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 CCDC91Q7Z6B0 441 aa16.25■□□□□ 0.19
HDAC1-206ENST00000476391 TBC1D8O95759 1140 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 TSGA10IPQ3SY00 556 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 CT47A1Q5JQC4 288 aaPredicted RBP16.24■□□□□ 0.19
HDAC1-206ENST00000476391 LEKR1Q6ZMV7 388 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 LRRN4CLQ8ND94 238 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 BANK1Q8NDB2 785 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 DNAJC25Q9H1X3 360 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 TOMM22Q9NS69 142 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 ADAM21Q9UKJ8 722 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 PNPLA6Q8IY17 1366 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 KIAA0232Q92628 1395 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 ANKRD26Q9UPS8 1709 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 AK2P54819 239 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 PPM1EQ8WY54 764 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 DRC1Q96MC2 740 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
HDAC1-206ENST00000476391 KIF1BO60333 1816 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 NPHP3Q7Z494 1330 aa16.24■□□□□ 0.19
HDAC1-206ENST00000476391 EFCAB8A8MWE9 144 aa16.23■□□□□ 0.19
HDAC1-206ENST00000476391 RPS6KA5O75582 802 aa16.23■□□□□ 0.19
HDAC1-206ENST00000476391 GJB2P29033 226 aa16.23■□□□□ 0.19
HDAC1-206ENST00000476391 IQCB1Q15051 598 aa16.23■□□□□ 0.19
HDAC1-206ENST00000476391 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
HDAC1-206ENST00000476391 RUFY3Q7L099 469 aa16.23■□□□□ 0.19
HDAC1-206ENST00000476391 SCAND2PQ9GZW5 306 aaPredicted RBP16.23■□□□□ 0.19
HDAC1-206ENST00000476391 TTC21AQ8NDW8 1320 aa16.23■□□□□ 0.19
HDAC1-206ENST00000476391 PHLPP2Q6ZVD8 1323 aa16.22■□□□□ 0.19
HDAC1-206ENST00000476391 ELL2O00472 640 aaPredicted RBP16.22■□□□□ 0.19
HDAC1-206ENST00000476391 SASH3O75995 380 aa16.22■□□□□ 0.19
HDAC1-206ENST00000476391 LMAN1P49257 510 aa16.22■□□□□ 0.19
HDAC1-206ENST00000476391 GSCP56915 257 aaPredicted RBP16.22■□□□□ 0.19
HDAC1-206ENST00000476391 GPATCH11Q8N954 259 aa16.22■□□□□ 0.19
HDAC1-206ENST00000476391 PPP1R13BQ96KQ4 1090 aa16.22■□□□□ 0.19
HDAC1-206ENST00000476391 VWDEQ8N2E2 1590 aa16.22■□□□□ 0.19
HDAC1-206ENST00000476391 GOLGA6L4A6NEF3 574 aa16.21■□□□□ 0.19
HDAC1-206ENST00000476391 DHX8Q14562 1220 aaKnown RBP16.21■□□□□ 0.19
HDAC1-206ENST00000476391 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
HDAC1-206ENST00000476391 E4F1Q66K89 784 aaPredicted RBP16.21■□□□□ 0.19
HDAC1-206ENST00000476391 CC2D1AQ6P1N0 951 aaPredicted RBP16.21■□□□□ 0.19
HDAC1-206ENST00000476391 DONSONQ9NYP3 566 aa16.21■□□□□ 0.19
HDAC1-206ENST00000476391 IMPACTQ9P2X3 320 aa16.21■□□□□ 0.19
HDAC1-206ENST00000476391 YTHDC2Q9H6S0 1430 aaKnown RBP16.21■□□□□ 0.19
HDAC1-206ENST00000476391 KIF1CO43896 1103 aaKnown RBP16.21■□□□□ 0.19
HDAC1-206ENST00000476391 TADA3O75528 432 aa16.21■□□□□ 0.19
HDAC1-206ENST00000476391 PRR29P0C7W0 189 aa16.21■□□□□ 0.19
HDAC1-206ENST00000476391 MNS1Q8NEH6 495 aa16.21■□□□□ 0.19
HDAC1-206ENST00000476391 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
HDAC1-206ENST00000476391 CHMP3Q9Y3E7 222 aa16.2■□□□□ 0.18
HDAC1-206ENST00000476391 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
HDAC1-206ENST00000476391 ADGRB1O14514 1584 aa16.2■□□□□ 0.18
HDAC1-206ENST00000476391 DEPDC5O75140 1603 aa16.2■□□□□ 0.18
HDAC1-206ENST00000476391 SEC31AO94979 1220 aaKnown RBP16.2■□□□□ 0.18
HDAC1-206ENST00000476391 RILPL2Q969X0 211 aa16.2■□□□□ 0.18
HDAC1-206ENST00000476391 ZSCAN31Q96LW9 406 aaPredicted RBP16.2■□□□□ 0.18
HDAC1-206ENST00000476391 SH2B1Q9NRF2 756 aaPredicted RBP16.2■□□□□ 0.18
HDAC1-206ENST00000476391 MSH6P52701 1360 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms