RNA–Protein interactions for RNA: ENST00000476241.2

HNRNPU-209, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 4,844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-209	ENST00000476241	IFNL2	Q8IZJ0	200 aa		18.83	■□□□□ 0.61
HNRNPU-209	ENST00000476241	RHPN1	Q8TCX5	695 aa		18.83	■□□□□ 0.61
HNRNPU-209	ENST00000476241	LUC7L	Q9NQ29	371 aa	Known RBP	18.83	■□□□□ 0.61
HNRNPU-209	ENST00000476241	MTMR7	Q9Y216	660 aa		18.83	■□□□□ 0.61
HNRNPU-209	ENST00000476241	TFIP11	Q9UBB9	837 aa	Known RBP	18.83	■□□□□ 0.6
HNRNPU-209	ENST00000476241		H0YHG0	523 aa		18.83	■□□□□ 0.6
HNRNPU-209	ENST00000476241	TSHZ3	Q63HK5	1081 aa		18.83	■□□□□ 0.6
HNRNPU-209	ENST00000476241	TMCO3	Q6UWJ1	677 aa		18.83	■□□□□ 0.6
HNRNPU-209	ENST00000476241	HMG20B	Q9P0W2	317 aa		18.83	■□□□□ 0.6
HNRNPU-209	ENST00000476241	LARP6	Q9BRS8	491 aa	Known RBP	18.82	■□□□□ 0.6
HNRNPU-209	ENST00000476241	IFIT1	P09914	478 aa	Known RBP	18.82	■□□□□ 0.6
HNRNPU-209	ENST00000476241	GSDMD	P57764	484 aa		18.82	■□□□□ 0.6
HNRNPU-209	ENST00000476241	CEP131	Q9UPN4	1083 aa		18.82	■□□□□ 0.6
HNRNPU-209	ENST00000476241	TDO2	P48775	406 aa		18.82	■□□□□ 0.6
HNRNPU-209	ENST00000476241	RBM5	P52756	815 aa	Known RBP eCLIP	18.82	■□□□□ 0.6	2e-11	■■■■□ 22.2
HNRNPU-209	ENST00000476241	ZKSCAN5	Q9Y2L8	839 aa		18.82	■□□□□ 0.6
HNRNPU-209	ENST00000476241	TXLNB	Q8N3L3	684 aa		18.81	■□□□□ 0.6
HNRNPU-209	ENST00000476241	CCDC43	Q96MW1	224 aa	Known RBP	18.81	■□□□□ 0.6
HNRNPU-209	ENST00000476241	MYD88	Q99836	296 aa		18.81	■□□□□ 0.6
HNRNPU-209	ENST00000476241	KAT6B	Q8WYB5	2073 aa		18.81	■□□□□ 0.6
HNRNPU-209	ENST00000476241	IDH1	O75874	414 aa	Known RBP	18.81	■□□□□ 0.6
HNRNPU-209	ENST00000476241	ARHGAP29	Q52LW3	1261 aa		18.81	■□□□□ 0.6
HNRNPU-209	ENST00000476241	CGN	Q9P2M7	1197 aa	Known RBP	18.81	■□□□□ 0.6
HNRNPU-209	ENST00000476241	PI4KAP2	A4QPH2	592 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	RBM25	P49756	843 aa	Known RBP	18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	PI4KAP1	Q8N8J0	262 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	MYO6	Q9UM54	1294 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	EPB41L2	O43491	1005 aa	Known RBP	18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	TAF3	Q5VWG9	929 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	C16orf45	Q96MC5	204 aa	Predicted RBP	18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	POLK	Q9UBT6	870 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	CBX1	P83916	185 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	ZMYM4	Q5VZL5	1548 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	ATP8B2	P98198	1209 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	FSIP1	Q8NA03	581 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	AIDA	Q96BJ3	306 aa		18.8	■□□□□ 0.6
HNRNPU-209	ENST00000476241	FBLN1	P23142	703 aa		18.79	■□□□□ 0.6
HNRNPU-209	ENST00000476241	SLAIN2	Q9P270	581 aa		18.79	■□□□□ 0.6
HNRNPU-209	ENST00000476241	STX1A	Q16623	288 aa		18.79	■□□□□ 0.6
HNRNPU-209	ENST00000476241	STK11IP	Q8N1F8	1099 aa		18.79	■□□□□ 0.6
HNRNPU-209	ENST00000476241	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.78	■□□□□ 0.6
HNRNPU-209	ENST00000476241	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.78	■□□□□ 0.6
HNRNPU-209	ENST00000476241	ACSBG1	Q96GR2	724 aa		18.78	■□□□□ 0.6
HNRNPU-209	ENST00000476241	DEF6	Q9H4E7	631 aa		18.78	■□□□□ 0.6
HNRNPU-209	ENST00000476241	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.78	■□□□□ 0.6
HNRNPU-209	ENST00000476241	TOP1	P11387	765 aa	Known RBP	18.78	■□□□□ 0.6
HNRNPU-209	ENST00000476241	PLEKHM2	Q8IWE5	1019 aa		18.78	■□□□□ 0.6
HNRNPU-209	ENST00000476241	CCDC196	A0A1B0GTZ2	297 aa		18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	RFC4	P35249	363 aa		18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	PRIM1	P49642	420 aa	Known RBP	18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	IK	Q13123	557 aa	Predicted RBP	18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	GIMAP6	Q6P9H5	292 aa		18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	GBP3	Q9H0R5	595 aa		18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	DNMT1	P26358	1616 aa	Known RBP	18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	USP48	Q86UV5	1035 aa		18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	ZCRB1	Q8TBF4	217 aa	Known RBP	18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	INTS4	Q96HW7	963 aa	Known RBP	18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	NEK1	Q96PY6	1258 aa		18.77	■□□□□ 0.6
HNRNPU-209	ENST00000476241	METTL24	Q5JXM2	366 aa		18.77	■□□□□ 0.59
HNRNPU-209	ENST00000476241	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.77	■□□□□ 0.59
HNRNPU-209	ENST00000476241	URI1	O94763	535 aa	Predicted RBP	18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	IGHMBP2	P38935	993 aa	Known RBP	18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	GUCY1B3	Q02153	619 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	IQCE	Q6IPM2	695 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	CEP85	Q6P2H3	762 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	MAP3K2	Q9Y2U5	619 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	NOLC1	Q14978	699 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	CCDC181	Q5TID7	509 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	TSPYL6	Q8N831	410 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	HSP90AB2P	Q58FF8	381 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	FAM200A	Q8TCP9	573 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	BLM	P54132	1417 aa	Predicted RBP	18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	TTC21A	Q8NDW8	1320 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	ADGRL2	O95490	1459 aa		18.76	■□□□□ 0.59
HNRNPU-209	ENST00000476241	SPATA31E1	Q6ZUB1	1445 aa		18.75	■□□□□ 0.59
HNRNPU-209	ENST00000476241	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.75	■□□□□ 0.59
HNRNPU-209	ENST00000476241		A0A087WZG4	1122 aa		18.75	■□□□□ 0.59
HNRNPU-209	ENST00000476241	ZBTB7B	O15156	539 aa	Predicted RBP	18.75	■□□□□ 0.59
HNRNPU-209	ENST00000476241	LRP2BP	Q9P2M1	347 aa		18.75	■□□□□ 0.59
HNRNPU-209	ENST00000476241	PAXBP1	Q9Y5B6	917 aa		18.75	■□□□□ 0.59
HNRNPU-209	ENST00000476241	ZNF213	O14771	459 aa		18.75	■□□□□ 0.59
HNRNPU-209	ENST00000476241	USP26	Q9BXU7	913 aa		18.74	■□□□□ 0.59
HNRNPU-209	ENST00000476241	TRMT1	Q9NXH9	659 aa	Known RBP	18.74	■□□□□ 0.59
HNRNPU-209	ENST00000476241	CNPY2	Q9Y2B0	182 aa		18.74	■□□□□ 0.59
HNRNPU-209	ENST00000476241	BTG4	Q9NY30	223 aa		18.74	■□□□□ 0.59
HNRNPU-209	ENST00000476241	SOGA3	Q5TF21	947 aa		18.74	■□□□□ 0.59
HNRNPU-209	ENST00000476241	KRT18	P05783	430 aa	Known RBP	18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	CCT2	P78371	535 aa	Known RBP	18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	SMARCC1	Q92922	1105 aa	Predicted RBP	18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	PATL2	C9JE40	543 aa	Known RBP	18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	F13A1	P00488	732 aa		18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	TSPYL1	Q9H0U9	437 aa		18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	TMOD2	Q9NZR1	351 aa		18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	NEO1	Q92859	1461 aa		18.73	■□□□□ 0.59
HNRNPU-209	ENST00000476241	GOLGA8B	A8MQT2	603 aa		18.72	■□□□□ 0.59
HNRNPU-209	ENST00000476241	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.72	■□□□□ 0.59
HNRNPU-209	ENST00000476241	POLD1	P28340	1107 aa		18.72	■□□□□ 0.59
HNRNPU-209	ENST00000476241	RPGR	Q92834	1020 aa	Known RBP	18.72	■□□□□ 0.59
HNRNPU-209	ENST00000476241	NAPB	Q9H115	298 aa		18.72	■□□□□ 0.59

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