RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 CALCOCO1Q9P1Z2 691 aa20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 TRMT112Q9UI30 125 aaKnown RBP20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 GTF2F1P35269 517 aaKnown RBP eCLIP20.48■□□□□ 0.872e-6■■■□□ 16.9
LPCAT1-202ENST00000475622 CATIPQ7Z7H3 387 aa20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 CCDC97Q96F63 343 aaPredicted RBP20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 A0A087WZG4 1122 aa20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 AMOTQ4VCS5 1084 aa20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 SNW1Q13573 536 aaKnown RBP20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 PPP4R3AQ6IN85 833 aa20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 HOOK3Q86VS8 718 aa20.48■□□□□ 0.87
LPCAT1-202ENST00000475622 C11orf95C9JLR9 678 aaPredicted RBP20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 FLIIQ13045 1269 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 UBE4AQ14139 1066 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 BMP2KLQ5H9B9 411 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 ALS2CR12Q96Q35 445 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 DBF4Q9UBU7 674 aaPredicted RBP20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 TMCO5BA8MYB1 307 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 POTEB2H3BUK9 544 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 IDEP14735 1019 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 IARSP41252 1262 aaKnown RBP20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 ISM2Q6H9L7 571 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 NAA15Q9BXJ9 866 aaKnown RBP20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 MICALCLQ6ZW33 695 aa20.47■□□□□ 0.87
LPCAT1-202ENST00000475622 GOLIM4O00461 696 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 MCM5P33992 734 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 CCDC144CPQ8IYA2 1237 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 HYPKQ9NX55 129 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 ORC3Q9UBD5 711 aaPredicted RBP20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 PPFIA3O75145 1194 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 ZPR1O75312 459 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 PPP4R3BQ5MIZ7 849 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 CUL5Q93034 780 aa20.46■□□□□ 0.87
LPCAT1-202ENST00000475622 PTPRCP08575 1304 aa20.45■□□□□ 0.87
LPCAT1-202ENST00000475622 ANKRD18BA2A2Z9 1011 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 CCDC175P0C221 793 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 CCDC40Q4G0X9 1142 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 TCERG1LQ5VWI1 586 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 EFCAB5A4FU69 1503 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 CHMP4BP1P59074 171 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 UBE2HP62256 183 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 SPTY2D1Q68D10 685 aaPredicted RBP20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 CTR9Q6PD62 1173 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 TCP11L1Q9NUJ3 509 aa20.45■□□□□ 0.86
LPCAT1-202ENST00000475622 GOLGA6L9A6NEM1 432 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 TMEM67Q5HYA8 995 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 DNAI2Q9GZS0 605 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 TSHZ3Q63HK5 1081 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 ZSWIM4Q9H7M6 989 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 HAND2P61296 217 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 KLHL40Q2TBA0 621 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 MICU3Q86XE3 530 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 CALML4Q96GE6 196 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 TAOK3Q9H2K8 898 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 SNRKQ9NRH2 765 aa20.44■□□□□ 0.86
LPCAT1-202ENST00000475622 PRPF4BQ13523 1007 aaKnown RBP20.43■□□□□ 0.86
LPCAT1-202ENST00000475622 CTNNA2P26232 953 aa20.43■□□□□ 0.86
LPCAT1-202ENST00000475622 GNG11P61952 73 aa20.43■□□□□ 0.86
LPCAT1-202ENST00000475622 CCDC102BQ68D86 513 aa20.43■□□□□ 0.86
LPCAT1-202ENST00000475622 RAB11FIP4Q86YS3 637 aa20.43■□□□□ 0.86
LPCAT1-202ENST00000475622 NEK1Q96PY6 1258 aa20.43■□□□□ 0.86
LPCAT1-202ENST00000475622 AMPD3Q01432 767 aa20.43■□□□□ 0.86
LPCAT1-202ENST00000475622 HCLS1P14317 486 aaPredicted RBP20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 CETN1Q12798 172 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 UVSSAQ2YD98 709 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 FAM107BQ9H098 131 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 NOP2P46087 812 aaKnown RBP20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 CEP135Q66GS9 1140 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 UBA7P41226 1012 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 TICAM2Q86XR7 235 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 SPDYE4A6NLX3 237 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 CCDC12Q8WUD4 166 aaPredicted RBP20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 TBC1D32Q96NH3 1257 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 ZBTB3Q9H5J0 574 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 JADE2Q9NQC1 790 aa20.42■□□□□ 0.86
LPCAT1-202ENST00000475622 MAATS1Q7Z4T9 603 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 STAMBPO95630 424 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 TTC22Q5TAA0 569 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 GIMAP6Q6P9H5 292 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 CCDC150Q8NCX0 1101 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 LIG1P18858 919 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 GPTP24298 496 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 ZSCAN23Q3MJ62 389 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 CAVIN2O95810 425 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 IGHDP01880 384 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 LMAN1P49257 510 aa20.41■□□□□ 0.86
LPCAT1-202ENST00000475622 METAP2P50579 478 aaKnown RBP eCLIP20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 BMS1Q14692 1282 aaKnown RBP20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 PPP1R42Q7Z4L9 355 aa20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 NAIPQ13075 1403 aa20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 KANK3Q6NY19 840 aa20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 FAM114A1Q8IWE2 563 aa20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 MYO1BO43795 1136 aa20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 SLC26A6Q9BXS9 759 aa20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 VAT1LQ9HCJ6 419 aa20.4■□□□□ 0.86
LPCAT1-202ENST00000475622 TIAM1Q13009 1591 aa20.39■□□□□ 0.86
LPCAT1-202ENST00000475622 KIF5BP33176 963 aa20.39■□□□□ 0.86
LPCAT1-202ENST00000475622 NF2P35240 595 aa20.39■□□□□ 0.86
LPCAT1-202ENST00000475622 TRMT1LQ7Z2T5 733 aaKnown RBP20.39■□□□□ 0.86
LPCAT1-202ENST00000475622 N4BP3O15049 544 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms