RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 PRPF40BQ6NWY9 871 aaKnown RBP17.88■□□□□ 0.45
GAPDH-208ENST00000474249 CNBD1Q8NA66 436 aa17.88■□□□□ 0.45
GAPDH-208ENST00000474249 MASTLQ96GX5 879 aa17.88■□□□□ 0.45
GAPDH-208ENST00000474249 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
GAPDH-208ENST00000474249 PRAMEF22A3QJZ6 481 aa17.87■□□□□ 0.45
GAPDH-208ENST00000474249 CLEC4GQ6UXB4 293 aa17.87■□□□□ 0.45
GAPDH-208ENST00000474249 L3MBTL3Q96JM7 780 aaPredicted RBP17.87■□□□□ 0.45
GAPDH-208ENST00000474249 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
GAPDH-208ENST00000474249 CREBZFQ9NS37 354 aa17.87■□□□□ 0.45
GAPDH-208ENST00000474249 BCORQ6W2J9 1755 aa17.87■□□□□ 0.45
GAPDH-208ENST00000474249 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
GAPDH-208ENST00000474249 PASKQ96RG2 1323 aa17.86■□□□□ 0.45
GAPDH-208ENST00000474249 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
GAPDH-208ENST00000474249 DZIP3Q86Y13 1208 aaKnown RBP17.86■□□□□ 0.45
GAPDH-208ENST00000474249 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
GAPDH-208ENST00000474249 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
GAPDH-208ENST00000474249 NBPF26B4DH59 902 aa17.84■□□□□ 0.45
GAPDH-208ENST00000474249 RGL2O15211 777 aa17.84■□□□□ 0.45
GAPDH-208ENST00000474249 SOGA3Q5TF21 947 aa17.84■□□□□ 0.45
GAPDH-208ENST00000474249 NBPF10Q6P3W6 841 aaKnown RBP17.84■□□□□ 0.45
GAPDH-208ENST00000474249 NBPF15Q8N660 670 aa17.84■□□□□ 0.45
GAPDH-208ENST00000474249 ITGBL1O95965 494 aaPredicted RBP17.83■□□□□ 0.44
GAPDH-208ENST00000474249 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
GAPDH-208ENST00000474249 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.44
GAPDH-208ENST00000474249 ST5P78524 1137 aa17.83■□□□□ 0.44
GAPDH-208ENST00000474249 CCER1Q8TC90 406 aaPredicted RBP17.83■□□□□ 0.44
GAPDH-208ENST00000474249 CAPN15O75808 1086 aa17.82■□□□□ 0.44
GAPDH-208ENST00000474249 TAF1DQ9H5J8 278 aaPredicted RBP17.82■□□□□ 0.44
GAPDH-208ENST00000474249 SCN4AP35499 1836 aa17.82■□□□□ 0.44
GAPDH-208ENST00000474249 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
GAPDH-208ENST00000474249 SNRPA1P09661 255 aaKnown RBP17.81■□□□□ 0.44
GAPDH-208ENST00000474249 NPR1P16066 1061 aa17.81■□□□□ 0.44
GAPDH-208ENST00000474249 OLFM4Q6UX06 510 aa17.8■□□□□ 0.44
GAPDH-208ENST00000474249 LDHDQ86WU2 507 aa17.8■□□□□ 0.44
GAPDH-208ENST00000474249 NBPF5PQ86XG9 351 aaPredicted RBP17.8■□□□□ 0.44
GAPDH-208ENST00000474249 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
GAPDH-208ENST00000474249 CNTNAP1P78357 1384 aa17.8■□□□□ 0.44
GAPDH-208ENST00000474249 ADAMTSL1Q8N6G6 1762 aa17.8■□□□□ 0.44
GAPDH-208ENST00000474249 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
GAPDH-208ENST00000474249 IQCA1LA6NCM1 817 aa17.79■□□□□ 0.44
GAPDH-208ENST00000474249 FKBP4Q02790 459 aaKnown RBP eCLIP17.79■□□□□ 0.44
GAPDH-208ENST00000474249 ZNF541Q9H0D2 1346 aa17.79■□□□□ 0.44
GAPDH-208ENST00000474249 FZD9O00144 591 aa17.78■□□□□ 0.44
GAPDH-208ENST00000474249 HLFQ16534 295 aa17.78■□□□□ 0.44
GAPDH-208ENST00000474249 CCDC93Q567U6 631 aa17.78■□□□□ 0.44
GAPDH-208ENST00000474249 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
GAPDH-208ENST00000474249 MCM10Q7L590 875 aa17.78■□□□□ 0.44
GAPDH-208ENST00000474249 FOXN1O15353 648 aa17.77■□□□□ 0.44
GAPDH-208ENST00000474249 NPM2Q86SE8 214 aaKnown RBP17.77■□□□□ 0.44
GAPDH-208ENST00000474249 HTATSF1O43719 755 aaKnown RBP17.76■□□□□ 0.43
GAPDH-208ENST00000474249 CRY2Q49AN0 593 aa17.76■□□□□ 0.43
GAPDH-208ENST00000474249 ZNF277Q9NRM2 450 aaPredicted RBP17.76■□□□□ 0.43
GAPDH-208ENST00000474249 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
GAPDH-208ENST00000474249 VEGFBP49765 207 aa17.75■□□□□ 0.43
GAPDH-208ENST00000474249 DCTN1Q14203 1278 aa17.75■□□□□ 0.43
GAPDH-208ENST00000474249 RTKN2Q8IZC4 609 aa17.75■□□□□ 0.43
GAPDH-208ENST00000474249 NIP7Q9Y221 180 aaKnown RBP eCLIP17.75■□□□□ 0.431e-25■□□□□ 8.2
GAPDH-208ENST00000474249 NPHP1O15259 732 aa17.74■□□□□ 0.43
GAPDH-208ENST00000474249 PRDM10Q9NQV6 1147 aa17.74■□□□□ 0.43
GAPDH-208ENST00000474249 TMEM88BA6NKF7 163 aa17.73■□□□□ 0.43
GAPDH-208ENST00000474249 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
GAPDH-208ENST00000474249 CNGB1Q14028 1251 aaPredicted RBP17.73■□□□□ 0.43
GAPDH-208ENST00000474249 WBP1LQ9NX94 342 aa17.73■□□□□ 0.43
GAPDH-208ENST00000474249 HACL1Q9UJ83 578 aa17.73■□□□□ 0.43
GAPDH-208ENST00000474249 COL4A5P29400 1685 aa17.73■□□□□ 0.43
GAPDH-208ENST00000474249 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 TAF7Q15545 349 aaPredicted RBP17.72■□□□□ 0.43
GAPDH-208ENST00000474249 SYNE4Q8N205 404 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 PSMD1Q99460 953 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 U2AF1L5P0DN76 240 aaPredicted RBP17.72■□□□□ 0.43
GAPDH-208ENST00000474249 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
GAPDH-208ENST00000474249 EPHX2P34913 555 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 IARSP41252 1262 aaKnown RBP17.72■□□□□ 0.43
GAPDH-208ENST00000474249 U2AF1Q01081 240 aaKnown RBP eCLIP17.72■□□□□ 0.43
GAPDH-208ENST00000474249 GPC2Q8N158 579 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 RTF1Q92541 710 aaKnown RBP17.72■□□□□ 0.43
GAPDH-208ENST00000474249 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
GAPDH-208ENST00000474249 RASSF10A6NK89 507 aa17.71■□□□□ 0.42
GAPDH-208ENST00000474249 PNMA8AQ86V59 439 aaPredicted RBP17.71■□□□□ 0.42
GAPDH-208ENST00000474249 MIS18AQ9NYP9 233 aa17.71■□□□□ 0.42
GAPDH-208ENST00000474249 ABCC12Q96J65 1359 aa17.7■□□□□ 0.42
GAPDH-208ENST00000474249 CNTROBQ8N137 903 aa17.7■□□□□ 0.42
GAPDH-208ENST00000474249 RNF123Q5XPI4 1314 aa17.69■□□□□ 0.42
GAPDH-208ENST00000474249 LTBP1Q14766 1721 aa17.69■□□□□ 0.42
GAPDH-208ENST00000474249 FAM177BA6PVY3 158 aa17.69■□□□□ 0.42
GAPDH-208ENST00000474249 EAPPQ56P03 285 aaPredicted RBP17.69■□□□□ 0.42
GAPDH-208ENST00000474249 MAP1SQ66K74 1059 aaPredicted RBP17.69■□□□□ 0.42
GAPDH-208ENST00000474249 RIC1Q4ADV7 1423 aa17.68■□□□□ 0.42
GAPDH-208ENST00000474249 CTCFP49711 727 aaPredicted RBP17.68■□□□□ 0.42
GAPDH-208ENST00000474249 CC2D2BQ6DHV5 1058 aa17.68■□□□□ 0.42
GAPDH-208ENST00000474249 SLC51AQ86UW1 340 aa17.68■□□□□ 0.42
GAPDH-208ENST00000474249 NUTM1Q86Y26 1132 aa17.68■□□□□ 0.42
GAPDH-208ENST00000474249 NUP98P52948 1817 aa17.67■□□□□ 0.42
GAPDH-208ENST00000474249 EIF4A1P60842 406 aaKnown RBP17.67■□□□□ 0.42
GAPDH-208ENST00000474249 DEFB115Q30KQ5 88 aa17.67■□□□□ 0.42
GAPDH-208ENST00000474249 MAP3K15Q6ZN16 1313 aa17.67■□□□□ 0.42
GAPDH-208ENST00000474249 TTLL7Q6ZT98 887 aa17.67■□□□□ 0.42
GAPDH-208ENST00000474249 UBN2Q6ZU65 1347 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms