RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 ERVV-1B6SEH8 477 aa14.61□□□□□ -0.07
CKS1B-206ENST00000474215 EIF2S2P20042 333 aaKnown RBP14.61□□□□□ -0.07
CKS1B-206ENST00000474215 HLFQ16534 295 aa14.61□□□□□ -0.07
CKS1B-206ENST00000474215 NBPF5PQ86XG9 351 aaPredicted RBP14.61□□□□□ -0.07
CKS1B-206ENST00000474215 CCDC24Q8N4L8 307 aa14.61□□□□□ -0.07
CKS1B-206ENST00000474215 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
CKS1B-206ENST00000474215 AFDNP55196 1824 aaKnown RBP14.61□□□□□ -0.07
CKS1B-206ENST00000474215 ST5P78524 1137 aa14.6□□□□□ -0.07
CKS1B-206ENST00000474215 TPTE2Q6XPS3 522 aa14.6□□□□□ -0.07
CKS1B-206ENST00000474215 KIF6Q6ZMV9 814 aa14.6□□□□□ -0.07
CKS1B-206ENST00000474215 TTLL7Q6ZT98 887 aa14.6□□□□□ -0.07
CKS1B-206ENST00000474215 TTLL6Q8N841 843 aa14.6□□□□□ -0.07
CKS1B-206ENST00000474215 CFAP44Q96MT7 982 aa14.6□□□□□ -0.07
CKS1B-206ENST00000474215 PDIA6Q15084 440 aa14.59□□□□□ -0.07
CKS1B-206ENST00000474215 LAMB4A4D0S4 1761 aa14.59□□□□□ -0.07
CKS1B-206ENST00000474215 MAP3K15Q6ZN16 1313 aa14.59□□□□□ -0.07
CKS1B-206ENST00000474215 ATP10DQ9P241 1426 aa14.58□□□□□ -0.07
CKS1B-206ENST00000474215 CALD1Q05682 793 aaKnown RBP14.58□□□□□ -0.08
CKS1B-206ENST00000474215 KRT24Q2M2I5 525 aa14.58□□□□□ -0.08
CKS1B-206ENST00000474215 MRS2Q9HD23 443 aa14.58□□□□□ -0.08
CKS1B-206ENST00000474215 ADCY9O60503 1353 aa14.58□□□□□ -0.08
CKS1B-206ENST00000474215 BCORQ6W2J9 1755 aa14.57□□□□□ -0.08
CKS1B-206ENST00000474215 BRCA1P38398 1863 aaKnown RBP14.57□□□□□ -0.08
CKS1B-206ENST00000474215 FAM177BA6PVY3 158 aa14.57□□□□□ -0.08
CKS1B-206ENST00000474215 ZNF853P0CG23 659 aa14.57□□□□□ -0.08
CKS1B-206ENST00000474215 LRP10Q7Z4F1 713 aa14.57□□□□□ -0.08
CKS1B-206ENST00000474215 NECTIN2Q92692 538 aa14.57□□□□□ -0.08
CKS1B-206ENST00000474215 ZNF622Q969S3 477 aaKnown RBP eCLIP14.57□□□□□ -0.08
CKS1B-206ENST00000474215 ZBTB3Q9H5J0 574 aa14.57□□□□□ -0.08
CKS1B-206ENST00000474215 HOXB7P09629 217 aa14.56□□□□□ -0.08
CKS1B-206ENST00000474215 SRGNP10124 158 aa14.56□□□□□ -0.08
CKS1B-206ENST00000474215 GNAI1P63096 354 aa14.56□□□□□ -0.08
CKS1B-206ENST00000474215 PROSER3Q2NL68 480 aa14.56□□□□□ -0.08
CKS1B-206ENST00000474215 MBIPQ9NS73 344 aa14.56□□□□□ -0.08
CKS1B-206ENST00000474215 IFT57Q9NWB7 429 aa14.56□□□□□ -0.08
CKS1B-206ENST00000474215 ANXA1P04083 346 aa14.55□□□□□ -0.08
CKS1B-206ENST00000474215 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
CKS1B-206ENST00000474215 C9orf131Q5VYM1 1079 aa14.55□□□□□ -0.08
CKS1B-206ENST00000474215 STYK1Q6J9G0 422 aa14.55□□□□□ -0.08
CKS1B-206ENST00000474215 GIGYF2Q6Y7W6 1299 aaKnown RBP14.55□□□□□ -0.08
CKS1B-206ENST00000474215 ZNF526Q8TF50 670 aaPredicted RBP14.55□□□□□ -0.08
CKS1B-206ENST00000474215 NYXQ9GZU5 481 aa14.55□□□□□ -0.08
CKS1B-206ENST00000474215 GPBP1L1Q9HC44 474 aaPredicted RBP14.55□□□□□ -0.08
CKS1B-206ENST00000474215 DDX21Q9NR30 783 aaKnown RBP eCLIP14.55□□□□□ -0.08
CKS1B-206ENST00000474215 KLRG2A4D1S0 409 aaPredicted RBP14.54□□□□□ -0.08
CKS1B-206ENST00000474215 HDGFL1Q5TGJ6 251 aa14.54□□□□□ -0.08
CKS1B-206ENST00000474215 DUSP27Q5VZP5 1158 aa14.54□□□□□ -0.08
CKS1B-206ENST00000474215 COPS6Q7L5N1 327 aa14.54□□□□□ -0.08
CKS1B-206ENST00000474215 ZNF34Q8IZ26 560 aa14.54□□□□□ -0.08
CKS1B-206ENST00000474215 CNKSR1Q969H4 720 aa14.54□□□□□ -0.08
CKS1B-206ENST00000474215 MASTLQ96GX5 879 aa14.54□□□□□ -0.08
CKS1B-206ENST00000474215 ARFGEF1Q9Y6D6 1849 aa14.54□□□□□ -0.08
CKS1B-206ENST00000474215 C21orf2O43822 256 aa14.53□□□□□ -0.08
CKS1B-206ENST00000474215 GPTP24298 496 aa14.53□□□□□ -0.08
CKS1B-206ENST00000474215 AIMP1Q12904 312 aaKnown RBP14.53□□□□□ -0.08
CKS1B-206ENST00000474215 XAGE3Q8WTP9 111 aa14.53□□□□□ -0.08
CKS1B-206ENST00000474215 DBF4Q9UBU7 674 aaPredicted RBP14.53□□□□□ -0.08
CKS1B-206ENST00000474215 ANKRD31Q8N7Z5 1873 aa14.52□□□□□ -0.08
CKS1B-206ENST00000474215 NPR1P16066 1061 aa14.52□□□□□ -0.09
CKS1B-206ENST00000474215 C1QTNF8P60827 252 aa14.52□□□□□ -0.09
CKS1B-206ENST00000474215 CCDC27Q2M243 656 aa14.52□□□□□ -0.09
CKS1B-206ENST00000474215 SUSD4Q5VX71 490 aa14.52□□□□□ -0.09
CKS1B-206ENST00000474215 RNF181Q9P0P0 153 aa14.52□□□□□ -0.09
CKS1B-206ENST00000474215 CHPF2Q9P2E5 772 aa14.52□□□□□ -0.09
CKS1B-206ENST00000474215 UBN2Q6ZU65 1347 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 SENP3-EIF4A1A0A087X0R7 540 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 LMNB1P20700 586 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 ERFEQ4G0M1 354 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
CKS1B-206ENST00000474215 PARP10Q53GL7 1025 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 PRPF40BQ6NWY9 871 aaKnown RBP14.51□□□□□ -0.09
CKS1B-206ENST00000474215 NUTM1Q86Y26 1132 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 WWC1Q8IX03 1113 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
CKS1B-206ENST00000474215 DLEC1Q9Y238 1755 aa14.51□□□□□ -0.09
CKS1B-206ENST00000474215 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
CKS1B-206ENST00000474215 RASSF7Q02833 373 aa14.5□□□□□ -0.09
CKS1B-206ENST00000474215 PPP1R42Q7Z4L9 355 aa14.5□□□□□ -0.09
CKS1B-206ENST00000474215 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
CKS1B-206ENST00000474215 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
CKS1B-206ENST00000474215 NFKBIEO00221 500 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 NTSR2O95665 410 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 ALDH1B1P30837 517 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 TCIRG1Q13488 830 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 HSP90AB3PQ58FF7 597 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 SOGA3Q5TF21 947 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 ANKRD13DQ6ZTN6 518 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 C8orf58Q8NAV2 365 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 NUP98P52948 1817 aa14.49□□□□□ -0.09
CKS1B-206ENST00000474215 PRELPP51888 382 aa14.48□□□□□ -0.09
CKS1B-206ENST00000474215 CRY2Q49AN0 593 aa14.48□□□□□ -0.09
CKS1B-206ENST00000474215 PLBD2Q8NHP8 589 aa14.48□□□□□ -0.09
CKS1B-206ENST00000474215 C7orf43Q8WVR3 580 aa14.48□□□□□ -0.09
CKS1B-206ENST00000474215 UTP14AQ9BVJ6 771 aaKnown RBP14.48□□□□□ -0.09
CKS1B-206ENST00000474215 CHMP4AQ9BY43 222 aa14.48□□□□□ -0.09
CKS1B-206ENST00000474215 COL11A2P13942 1736 aaPredicted RBP14.48□□□□□ -0.09
CKS1B-206ENST00000474215 ABCC12Q96J65 1359 aa14.47□□□□□ -0.09
CKS1B-206ENST00000474215 SLC10A5Q5PT55 438 aa14.47□□□□□ -0.09
CKS1B-206ENST00000474215 NLRP10Q86W26 655 aa14.47□□□□□ -0.09
CKS1B-206ENST00000474215 IL16Q14005 1332 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms