RNA–Protein interactions for RNA: ENST00000474178.1

RAB3GAP2-204, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-204ENST00000474178 DEFB115Q30KQ5 88 aa13.69□□□□□ -0.22
RAB3GAP2-204ENST00000474178 EAPPQ56P03 285 aaPredicted RBP13.69□□□□□ -0.22
RAB3GAP2-204ENST00000474178 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
RAB3GAP2-204ENST00000474178 PRPF40BQ6NWY9 871 aaKnown RBP13.69□□□□□ -0.22
RAB3GAP2-204ENST00000474178 TRPM7Q96QT4 1865 aa13.68□□□□□ -0.22
RAB3GAP2-204ENST00000474178 IL13P35225 146 aa13.68□□□□□ -0.22
RAB3GAP2-204ENST00000474178 FMR1Q06787 632 aaKnown RBP eCLIP13.68□□□□□ -0.22
RAB3GAP2-204ENST00000474178 MAP1SQ66K74 1059 aaPredicted RBP13.68□□□□□ -0.22
RAB3GAP2-204ENST00000474178 VSIG10Q8N0Z9 540 aa13.68□□□□□ -0.22
RAB3GAP2-204ENST00000474178 C7orf43Q8WVR3 580 aa13.68□□□□□ -0.22
RAB3GAP2-204ENST00000474178 SRGNP10124 158 aa13.67□□□□□ -0.22
RAB3GAP2-204ENST00000474178 STYK1Q6J9G0 422 aa13.67□□□□□ -0.22
RAB3GAP2-204ENST00000474178 OLFM4Q6UX06 510 aa13.67□□□□□ -0.22
RAB3GAP2-204ENST00000474178 PDZRN3Q9UPQ7 1066 aa13.67□□□□□ -0.22
RAB3GAP2-204ENST00000474178 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
RAB3GAP2-204ENST00000474178 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
RAB3GAP2-204ENST00000474178 EPHX2P34913 555 aa13.66□□□□□ -0.22
RAB3GAP2-204ENST00000474178 CNTROBQ8N137 903 aa13.66□□□□□ -0.22
RAB3GAP2-204ENST00000474178 CNKSR1Q969H4 720 aa13.66□□□□□ -0.22
RAB3GAP2-204ENST00000474178 HACL1Q9UJ83 578 aa13.66□□□□□ -0.22
RAB3GAP2-204ENST00000474178 CLEC11AQ9Y240 323 aa13.66□□□□□ -0.22
RAB3GAP2-204ENST00000474178 COL4A5P29400 1685 aa13.66□□□□□ -0.22
RAB3GAP2-204ENST00000474178 RNF123Q5XPI4 1314 aa13.65□□□□□ -0.22
RAB3GAP2-204ENST00000474178 CASP8AP2Q9UKL3 1982 aa13.65□□□□□ -0.22
RAB3GAP2-204ENST00000474178 MAP2K1Q02750 393 aaPredicted RBP13.65□□□□□ -0.22
RAB3GAP2-204ENST00000474178 MASTLQ96GX5 879 aa13.65□□□□□ -0.22
RAB3GAP2-204ENST00000474178 ZNF277Q9NRM2 450 aaPredicted RBP13.65□□□□□ -0.22
RAB3GAP2-204ENST00000474178 TSKSQ9UJT2 592 aa13.65□□□□□ -0.22
RAB3GAP2-204ENST00000474178 A0A087WZG4 1122 aa13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 CAMTA2O94983 1202 aa13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 CNBD1Q8NA66 436 aa13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 POLR3GLQ9BT43 218 aa13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 ABT1Q9ULW3 272 aaKnown RBP13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 SNED1Q8TER0 1413 aa13.63□□□□□ -0.23
RAB3GAP2-204ENST00000474178 FZD9O00144 591 aa13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 FKBP4Q02790 459 aaKnown RBP eCLIP13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 CYP4F22Q6NT55 531 aa13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 ZNF496Q96IT1 587 aaPredicted RBP13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 CAPNS2Q96L46 248 aa13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 ZNF330Q9Y3S2 320 aaPredicted RBP13.62□□□□□ -0.23
RAB3GAP2-204ENST00000474178 HEG1Q9ULI3 1381 aa13.61□□□□□ -0.23
RAB3GAP2-204ENST00000474178 TNRC18O15417 2968 aaPredicted RBP13.61□□□□□ -0.23
RAB3GAP2-204ENST00000474178 STARD3NLO95772 234 aa13.61□□□□□ -0.23
RAB3GAP2-204ENST00000474178 A1BGP04217 495 aa13.61□□□□□ -0.23
RAB3GAP2-204ENST00000474178 HMOX1P09601 288 aa13.61□□□□□ -0.23
RAB3GAP2-204ENST00000474178 SETDB2Q96T68 719 aa13.61□□□□□ -0.23
RAB3GAP2-204ENST00000474178 PANK3Q9H999 370 aa13.61□□□□□ -0.23
RAB3GAP2-204ENST00000474178 AOC2O75106 756 aa13.6□□□□□ -0.23
RAB3GAP2-204ENST00000474178 IL6STP40189 918 aaPredicted RBP13.6□□□□□ -0.23
RAB3GAP2-204ENST00000474178 ST5P78524 1137 aa13.6□□□□□ -0.23
RAB3GAP2-204ENST00000474178 CST9Q5W186 159 aa13.6□□□□□ -0.23
RAB3GAP2-204ENST00000474178 PNMA8AQ86V59 439 aaPredicted RBP13.6□□□□□ -0.23
RAB3GAP2-204ENST00000474178 GRM1Q13255 1194 aa13.59□□□□□ -0.23
RAB3GAP2-204ENST00000474178 MORC1Q86VD1 984 aa13.59□□□□□ -0.23
RAB3GAP2-204ENST00000474178 GPR101Q96P66 508 aaPredicted RBP13.59□□□□□ -0.23
RAB3GAP2-204ENST00000474178 MCOLN1Q9GZU1 580 aa13.59□□□□□ -0.23
RAB3GAP2-204ENST00000474178 KLRG2A4D1S0 409 aaPredicted RBP13.58□□□□□ -0.24
RAB3GAP2-204ENST00000474178 TRAF5O00463 557 aa13.58□□□□□ -0.24
RAB3GAP2-204ENST00000474178 IARSP41252 1262 aaKnown RBP13.58□□□□□ -0.24
RAB3GAP2-204ENST00000474178 PIP4K2AP48426 406 aaPredicted RBP13.58□□□□□ -0.24
RAB3GAP2-204ENST00000474178 SLC51AQ86UW1 340 aa13.58□□□□□ -0.24
RAB3GAP2-204ENST00000474178 SYNE4Q8N205 404 aa13.58□□□□□ -0.24
RAB3GAP2-204ENST00000474178 NPHP1O15259 732 aa13.57□□□□□ -0.24
RAB3GAP2-204ENST00000474178 NPR1P16066 1061 aa13.57□□□□□ -0.24
RAB3GAP2-204ENST00000474178 ZNF790Q6PG37 636 aa13.57□□□□□ -0.24
RAB3GAP2-204ENST00000474178 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
RAB3GAP2-204ENST00000474178 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
RAB3GAP2-204ENST00000474178 GPC2Q8N158 579 aa13.57□□□□□ -0.24
RAB3GAP2-204ENST00000474178 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
RAB3GAP2-204ENST00000474178 KCNQ3O43525 872 aa13.56□□□□□ -0.24
RAB3GAP2-204ENST00000474178 EPS15P42566 896 aa13.56□□□□□ -0.24
RAB3GAP2-204ENST00000474178 SCNN1DP51172 638 aa13.56□□□□□ -0.24
RAB3GAP2-204ENST00000474178 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
RAB3GAP2-204ENST00000474178 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
RAB3GAP2-204ENST00000474178 TLL2Q9Y6L7 1015 aa13.56□□□□□ -0.24
RAB3GAP2-204ENST00000474178 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
RAB3GAP2-204ENST00000474178 ECE1P42892 770 aa13.55□□□□□ -0.24
RAB3GAP2-204ENST00000474178 NBPF5PQ86XG9 351 aaPredicted RBP13.55□□□□□ -0.24
RAB3GAP2-204ENST00000474178 RTKN2Q8IZC4 609 aa13.55□□□□□ -0.24
RAB3GAP2-204ENST00000474178 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
RAB3GAP2-204ENST00000474178 USP16Q9Y5T5 823 aa13.54□□□□□ -0.24
RAB3GAP2-204ENST00000474178 GJA3Q9Y6H8 435 aa13.54□□□□□ -0.24
RAB3GAP2-204ENST00000474178 TEX13AQ9BXU3 409 aaPredicted RBP13.53□□□□□ -0.24
RAB3GAP2-204ENST00000474178 MAP2K2P36507 400 aa13.52□□□□□ -0.25
RAB3GAP2-204ENST00000474178 DGKZQ13574 1117 aa13.52□□□□□ -0.25
RAB3GAP2-204ENST00000474178 PSMD1Q99460 953 aa13.52□□□□□ -0.25
RAB3GAP2-204ENST00000474178 NUP98P52948 1817 aa13.52□□□□□ -0.25
RAB3GAP2-204ENST00000474178 COL3A1P02461 1466 aaPredicted RBP13.51□□□□□ -0.25
RAB3GAP2-204ENST00000474178 ABCC12Q96J65 1359 aa13.51□□□□□ -0.25
RAB3GAP2-204ENST00000474178 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
RAB3GAP2-204ENST00000474178 CLEC4GQ6UXB4 293 aa13.51□□□□□ -0.25
RAB3GAP2-204ENST00000474178 SAPCD2Q86UD0 394 aa13.51□□□□□ -0.25
RAB3GAP2-204ENST00000474178 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
RAB3GAP2-204ENST00000474178 ZIC5Q96T25 663 aa13.51□□□□□ -0.25
RAB3GAP2-204ENST00000474178 CEMIPQ8WUJ3 1361 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms