RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 CFAP74Q9C0B2 1584 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 ZBED9Q6R2W3 1325 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 TRAK2O60296 914 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 GPC1P35052 558 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 ABL2P42684 1182 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 WASHC4Q2M389 1173 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 CDCA8Q53HL2 280 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 FAM9BQ8IZU0 186 aa7.9□□□□□ -1.14
ATPAF1-204ENST00000474020 ABCA9Q8IUA7 1624 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 ATP7AQ04656 1500 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 ZFYVE16Q7Z3T8 1539 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 ADGRL1O94910 1474 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 TRAPPC8Q9Y2L5 1435 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 GPRASP1Q5JY77 1395 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 A0A1W2PRU2 124 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 TMF1P82094 1093 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 VAC14Q08AM6 782 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 RGL3Q3MIN7 710 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 LYSMD3Q7Z3D4 306 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 CCDC85AQ96PX6 553 aaPredicted RBP7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 OSBPL3Q9H4L5 887 aa7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 ESF1Q9H501 851 aaKnown RBP7.89□□□□□ -1.15
ATPAF1-204ENST00000474020 EIF3AQ14152 1382 aaKnown RBP7.88□□□□□ -1.15
ATPAF1-204ENST00000474020 ST20-MTHFSA0A0A6YYL1 179 aa7.88□□□□□ -1.15
ATPAF1-204ENST00000474020 SUZ12Q15022 739 aaKnown RBP7.88□□□□□ -1.15
ATPAF1-204ENST00000474020 PHTF2Q8N3S3 785 aa7.88□□□□□ -1.15
ATPAF1-204ENST00000474020 ZSCAN1Q8NBB4 408 aa7.88□□□□□ -1.15
ATPAF1-204ENST00000474020 TMC1Q8TDI8 760 aa7.88□□□□□ -1.15
ATPAF1-204ENST00000474020 NANOS1Q8WY41 292 aaKnown RBP7.88□□□□□ -1.15
ATPAF1-204ENST00000474020 A2MP01023 1474 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 ASXL2Q76L83 1435 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 SCAPERQ9BY12 1400 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 MYBBP1AQ9BQG0 1328 aaKnown RBP7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 WASHC2CQ9Y4E1 1318 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 SENP3-EIF4A1A0A087X0R7 540 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 MEN1O00255 615 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 ITGA6P23229 1130 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 CLN3Q13286 438 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 COG6Q9Y2V7 657 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 TRPM1Q7Z4N2 1603 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 TRPM2O94759 1503 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 ZNF518AQ6AHZ1 1483 aa7.87□□□□□ -1.15
ATPAF1-204ENST00000474020 BRD4O60885 1362 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 DHX29Q7Z478 1369 aaKnown RBP7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 INO80Q9ULG1 1556 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 MYCP01106 439 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 SOX11P35716 441 aa7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 SLFNL1Q499Z3 407 aa7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 NLRP3Q96P20 1036 aa7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 TET3O43151 1660 aa7.86□□□□□ -1.15
ATPAF1-204ENST00000474020 PRDM15P57071 1507 aaPredicted RBP7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 KIF3BO15066 747 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 GNRH1P01148 92 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 RNF135Q8IUD6 432 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 AFAP1Q8N556 730 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 ARHGEF10LQ9HCE6 1279 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 DOLKQ9UPQ8 538 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 PLA2R1Q13018 1463 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 DEPDC5O75140 1603 aa7.85□□□□□ -1.15
ATPAF1-204ENST00000474020 BCORL1Q5H9F3 1711 aa7.84□□□□□ -1.15
ATPAF1-204ENST00000474020 COL17A1Q9UMD9 1497 aaPredicted RBP7.84□□□□□ -1.15
ATPAF1-204ENST00000474020 NLRP13Q86W25 1043 aa7.84□□□□□ -1.15
ATPAF1-204ENST00000474020 GPR161Q8N6U8 529 aaKnown RBP7.84□□□□□ -1.15
ATPAF1-204ENST00000474020 PTPRTO14522 1441 aa7.84□□□□□ -1.15
ATPAF1-204ENST00000474020 FLIIQ13045 1269 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 USP4Q13107 963 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 SEMA3FQ13275 785 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 TSGA10IPQ3SY00 556 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 SLC27A3Q5K4L6 730 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 FBXO41Q8TF61 875 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 GRIP2Q9C0E4 1043 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 CD109Q6YHK3 1445 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 NEURL4Q96JN8 1562 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 SPHKAPQ2M3C7 1700 aa7.83□□□□□ -1.16
ATPAF1-204ENST00000474020 RHOQP17081 205 aa7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 CNGB1Q14028 1251 aaPredicted RBP7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 TMEM132AQ24JP5 1023 aa7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 SV2AQ7L0J3 742 aa7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 SMG6Q86US8 1419 aaKnown RBP7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 ESYT1Q9BSJ8 1104 aa7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 RAB6BQ9NRW1 208 aa7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 PPP4R2Q9NY27 417 aa7.82□□□□□ -1.16
ATPAF1-204ENST00000474020 SCAF11Q99590 1463 aaKnown RBP7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 CEP152O94986 1710 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 VWDEQ8N2E2 1590 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 CDC14CA4D256 554 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 SPATA31C2B4DYI2 1134 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 IL2RAP01589 272 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 KRT76Q01546 638 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 WWC1Q8IX03 1113 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 VWA5B2Q8N398 1253 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 CNKSR1Q969H4 720 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 SIRT1Q96EB6 747 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 NUDCQ9Y266 331 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 E9PCH4 1651 aa7.81□□□□□ -1.16
ATPAF1-204ENST00000474020 RNF17Q9BXT8 1623 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms