RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CHRNA5P30532 468 aa15.03■□□□□ -0
CPNE1-222ENST00000473373 ST5P78524 1137 aa15.03■□□□□ -0
CPNE1-222ENST00000473373 BCL2L12Q9HB09 334 aa15.03■□□□□ -0
CPNE1-222ENST00000473373 CCDC88AQ3V6T2 1871 aa15.03■□□□□ -0
CPNE1-222ENST00000473373 ANKRD31Q8N7Z5 1873 aa15.02■□□□□ -0
CPNE1-222ENST00000473373 FAM177BA6PVY3 158 aa15.02■□□□□ -0
CPNE1-222ENST00000473373 APAF1O14727 1248 aa15.02■□□□□ -0
CPNE1-222ENST00000473373 CAMTA2O94983 1202 aa15.02■□□□□ -0
CPNE1-222ENST00000473373 GTF2E1P29083 439 aaPredicted RBP15.02■□□□□ -0
CPNE1-222ENST00000473373 DALRD3Q5D0E6 543 aaKnown RBP15.02■□□□□ -0
CPNE1-222ENST00000473373 DNAJC5GQ8N7S2 189 aa15.02■□□□□ -0
CPNE1-222ENST00000473373 CNBD1Q8NA66 436 aa15.02■□□□□ -0
CPNE1-222ENST00000473373 NECTIN2Q92692 538 aa15.02■□□□□ -0
CPNE1-222ENST00000473373 H0YIN7 160 aa15.01□□□□□ -0.01
CPNE1-222ENST00000473373 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
CPNE1-222ENST00000473373 NBPF5PQ86XG9 351 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-222ENST00000473373 C2CD5Q86YS7 1000 aa15.01□□□□□ -0.01
CPNE1-222ENST00000473373 CCDC24Q8N4L8 307 aa15.01□□□□□ -0.01
CPNE1-222ENST00000473373 BABAM1Q9NWV8 329 aa15.01□□□□□ -0.01
CPNE1-222ENST00000473373 NIP7Q9Y221 180 aaKnown RBP eCLIP15.01□□□□□ -0.01
CPNE1-222ENST00000473373 NBPF26B4DH59 902 aa15□□□□□ -0.01
CPNE1-222ENST00000473373 C9orf131Q5VYM1 1079 aa15□□□□□ -0.01
CPNE1-222ENST00000473373 NBPF10Q6P3W6 841 aaKnown RBP15□□□□□ -0.01
CPNE1-222ENST00000473373 NBPF15Q8N660 670 aa15□□□□□ -0.01
CPNE1-222ENST00000473373 ZNF622Q969S3 477 aaKnown RBP eCLIP15□□□□□ -0.01
CPNE1-222ENST00000473373 KCNA3P22001 575 aa14.99□□□□□ -0.01
CPNE1-222ENST00000473373 PDE6BP35913 854 aa14.99□□□□□ -0.01
CPNE1-222ENST00000473373 CLEC4GQ6UXB4 293 aa14.99□□□□□ -0.01
CPNE1-222ENST00000473373 TRIM35Q9UPQ4 493 aa14.99□□□□□ -0.01
CPNE1-222ENST00000473373 HTRA3P83110 453 aa14.98□□□□□ -0.01
CPNE1-222ENST00000473373 ZBTB3Q9H5J0 574 aa14.98□□□□□ -0.01
CPNE1-222ENST00000473373 ANKRD36CQ5JPF3 1778 aa14.98□□□□□ -0.01
CPNE1-222ENST00000473373 COL11A2P13942 1736 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-222ENST00000473373 ERBB4Q15303 1308 aa14.97□□□□□ -0.01
CPNE1-222ENST00000473373 AIMP1Q12904 312 aaKnown RBP14.97□□□□□ -0.01
CPNE1-222ENST00000473373 CCDC184Q52MB2 194 aa14.97□□□□□ -0.01
CPNE1-222ENST00000473373 PRR5LQ6MZQ0 368 aa14.97□□□□□ -0.01
CPNE1-222ENST00000473373 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-222ENST00000473373 SBF1O95248 1867 aa14.97□□□□□ -0.01
CPNE1-222ENST00000473373 MAP3K15Q6ZN16 1313 aa14.96□□□□□ -0.01
CPNE1-222ENST00000473373 GNAI1P63096 354 aa14.96□□□□□ -0.01
CPNE1-222ENST00000473373 TPTE2Q6XPS3 522 aa14.96□□□□□ -0.01
CPNE1-222ENST00000473373 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
CPNE1-222ENST00000473373 CFAP44Q96MT7 982 aa14.96□□□□□ -0.01
CPNE1-222ENST00000473373 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-222ENST00000473373 PDZRN3Q9UPQ7 1066 aa14.96□□□□□ -0.01
CPNE1-222ENST00000473373 CHL1O00533 1208 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 ANXA1P04083 346 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 GPTP24298 496 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 HLFQ16534 295 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 HDGFL1Q5TGJ6 251 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 TTLL7Q6ZT98 887 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 FAM9BQ8IZU0 186 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
CPNE1-222ENST00000473373 BRIP1Q9BX63 1249 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 NYXQ9GZU5 481 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 RRAGCQ9HB90 399 aa14.95□□□□□ -0.02
CPNE1-222ENST00000473373 SALL2Q9Y467 1007 aaPredicted RBP14.95□□□□□ -0.02
CPNE1-222ENST00000473373 ARFGEF2Q9Y6D5 1785 aa14.94□□□□□ -0.02
CPNE1-222ENST00000473373 ERVV-1B6SEH8 477 aa14.94□□□□□ -0.02
CPNE1-222ENST00000473373 KRT24Q2M2I5 525 aa14.94□□□□□ -0.02
CPNE1-222ENST00000473373 RNF181Q9P0P0 153 aa14.94□□□□□ -0.02
CPNE1-222ENST00000473373 MBIPQ9NS73 344 aa14.93□□□□□ -0.02
CPNE1-222ENST00000473373 IFT57Q9NWB7 429 aa14.93□□□□□ -0.02
CPNE1-222ENST00000473373 ELL2O00472 640 aaPredicted RBP14.92□□□□□ -0.02
CPNE1-222ENST00000473373 DUSP27Q5VZP5 1158 aa14.92□□□□□ -0.02
CPNE1-222ENST00000473373 CHPF2Q9P2E5 772 aa14.92□□□□□ -0.02
CPNE1-222ENST00000473373 SLX4Q8IY92 1834 aa14.92□□□□□ -0.02
CPNE1-222ENST00000473373 KDM2BQ8NHM5 1336 aa14.92□□□□□ -0.02
CPNE1-222ENST00000473373 RGL2O15211 777 aa14.91□□□□□ -0.02
CPNE1-222ENST00000473373 COL13A1Q5TAT6 717 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-222ENST00000473373 COPS6Q7L5N1 327 aa14.91□□□□□ -0.02
CPNE1-222ENST00000473373 PPP1R42Q7Z4L9 355 aa14.91□□□□□ -0.02
CPNE1-222ENST00000473373 XAGE3Q8WTP9 111 aa14.91□□□□□ -0.02
CPNE1-222ENST00000473373 CNKSR1Q969H4 720 aa14.91□□□□□ -0.02
CPNE1-222ENST00000473373 KLRG1Q96E93 195 aa14.91□□□□□ -0.02
CPNE1-222ENST00000473373 MASTLQ96GX5 879 aa14.91□□□□□ -0.02
CPNE1-222ENST00000473373 DDX21Q9NR30 783 aaKnown RBP eCLIP14.91□□□□□ -0.02
CPNE1-222ENST00000473373 TIAM2Q8IVF5 1701 aa14.9□□□□□ -0.02
CPNE1-222ENST00000473373 HOXB7P09629 217 aa14.9□□□□□ -0.02
CPNE1-222ENST00000473373 FSTL1Q12841 308 aa14.9□□□□□ -0.02
CPNE1-222ENST00000473373 PROSER3Q2NL68 480 aa14.9□□□□□ -0.02
CPNE1-222ENST00000473373 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
CPNE1-222ENST00000473373 GIGYF2Q6Y7W6 1299 aaKnown RBP14.9□□□□□ -0.02
CPNE1-222ENST00000473373 NUTM1Q86Y26 1132 aa14.9□□□□□ -0.02
CPNE1-222ENST00000473373 DBF4Q9UBU7 674 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-222ENST00000473373 DICER1Q9UPY3 1922 aaKnown RBP14.9□□□□□ -0.02
CPNE1-222ENST00000473373 WDR90Q96KV7 1748 aa14.89□□□□□ -0.03
CPNE1-222ENST00000473373 FER1L6Q2WGJ9 1857 aa14.89□□□□□ -0.03
CPNE1-222ENST00000473373 C21orf2O43822 256 aa14.89□□□□□ -0.03
CPNE1-222ENST00000473373 RASSF7Q02833 373 aa14.89□□□□□ -0.03
CPNE1-222ENST00000473373 STYK1Q6J9G0 422 aa14.89□□□□□ -0.03
CPNE1-222ENST00000473373 RPGRQ92834 1020 aaKnown RBP14.89□□□□□ -0.03
CPNE1-222ENST00000473373 CHMP4AQ9BY43 222 aa14.89□□□□□ -0.03
CPNE1-222ENST00000473373 TNRC6CQ9HCJ0 1690 aaKnown RBP14.88□□□□□ -0.03
CPNE1-222ENST00000473373 CACNA1FO60840 1977 aa14.88□□□□□ -0.03
CPNE1-222ENST00000473373 CAPN15O75808 1086 aa14.88□□□□□ -0.03
CPNE1-222ENST00000473373 NPR1P16066 1061 aa14.88□□□□□ -0.03
CPNE1-222ENST00000473373 PDIA6Q15084 440 aa14.88□□□□□ -0.03
CPNE1-222ENST00000473373 PARP10Q53GL7 1025 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms