RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NBPF5PQ86XG9 351 aaPredicted RBP29.75■■■□□ 2.35
C9orf3-213ENST00000471978 LAMB4A4D0S4 1761 aa29.74■■■□□ 2.35
C9orf3-213ENST00000471978 COL11A2P13942 1736 aaPredicted RBP29.74■■■□□ 2.35
C9orf3-213ENST00000471978 RGL2O15211 777 aa29.72■■■□□ 2.35
C9orf3-213ENST00000471978 PRELPP51888 382 aa29.72■■■□□ 2.35
C9orf3-213ENST00000471978 ZNF219Q9P2Y4 722 aaPredicted RBP29.72■■■□□ 2.35
C9orf3-213ENST00000471978 NIP7Q9Y221 180 aaKnown RBP eCLIP29.72■■■□□ 2.35
C9orf3-213ENST00000471978 NFKBIEO00221 500 aa29.71■■■□□ 2.35
C9orf3-213ENST00000471978 C21orf2O43822 256 aa29.71■■■□□ 2.35
C9orf3-213ENST00000471978 RIPK4P57078 832 aa29.71■■■□□ 2.35
C9orf3-213ENST00000471978 MYBBP1AQ9BQG0 1328 aaKnown RBP29.71■■■□□ 2.35
C9orf3-213ENST00000471978 ZC3H4Q9UPT8 1303 aaKnown RBP29.71■■■□□ 2.35
C9orf3-213ENST00000471978 SRGNP10124 158 aa29.7■■■□□ 2.35
C9orf3-213ENST00000471978 STYK1Q6J9G0 422 aa29.7■■■□□ 2.35
C9orf3-213ENST00000471978 C16orf71Q8IYS4 520 aaPredicted RBP29.7■■■□□ 2.35
C9orf3-213ENST00000471978 NGEFQ8N5V2 710 aa29.7■■■□□ 2.35
C9orf3-213ENST00000471978 HLFQ16534 295 aa29.69■■■□□ 2.34
C9orf3-213ENST00000471978 TPTE2Q6XPS3 522 aa29.69■■■□□ 2.34
C9orf3-213ENST00000471978 CNKSR1Q969H4 720 aa29.69■■■□□ 2.34
C9orf3-213ENST00000471978 RRP7AQ9Y3A4 280 aaKnown RBP29.69■■■□□ 2.34
C9orf3-213ENST00000471978 MASTLQ96GX5 879 aa29.68■■■□□ 2.34
C9orf3-213ENST00000471978 RRAGCQ9HB90 399 aa29.68■■■□□ 2.34
C9orf3-213ENST00000471978 TSPYL4Q9UJ04 414 aa29.67■■■□□ 2.34
C9orf3-213ENST00000471978 FAM177BA6PVY3 158 aa29.66■■■□□ 2.34
C9orf3-213ENST00000471978 TMPOP42166 694 aaKnown RBP29.65■■■□□ 2.34
C9orf3-213ENST00000471978 PRPF40BQ6NWY9 871 aaKnown RBP29.65■■■□□ 2.34
C9orf3-213ENST00000471978 RBM46Q8TBY0 533 aaKnown RBP29.65■■■□□ 2.34
C9orf3-213ENST00000471978 MYL6BP14649 208 aa29.64■■■□□ 2.34
C9orf3-213ENST00000471978 ERVV-1B6SEH8 477 aa29.63■■■□□ 2.33
C9orf3-213ENST00000471978 LMOD3Q0VAK6 560 aa29.63■■■□□ 2.33
C9orf3-213ENST00000471978 KIF6Q6ZMV9 814 aa29.63■■■□□ 2.33
C9orf3-213ENST00000471978 TNRC6CQ9HCJ0 1690 aaKnown RBP29.63■■■□□ 2.33
C9orf3-213ENST00000471978 SLX4Q8IY92 1834 aa29.62■■■□□ 2.33
C9orf3-213ENST00000471978 CCDC88AQ3V6T2 1871 aa29.62■■■□□ 2.33
C9orf3-213ENST00000471978 GLTPD2A6NH11 291 aa29.62■■■□□ 2.33
C9orf3-213ENST00000471978 TTLL7Q6ZT98 887 aa29.62■■■□□ 2.33
C9orf3-213ENST00000471978 CCDC146Q8IYE0 955 aa29.62■■■□□ 2.33
C9orf3-213ENST00000471978 MAP3K15Q6ZN16 1313 aa29.62■■■□□ 2.33
C9orf3-213ENST00000471978 KLRG2A4D1S0 409 aaPredicted RBP29.61■■■□□ 2.33
C9orf3-213ENST00000471978 NPR1P16066 1061 aa29.61■■■□□ 2.33
C9orf3-213ENST00000471978 GTF2E1P29083 439 aaPredicted RBP29.61■■■□□ 2.33
C9orf3-213ENST00000471978 APLP1P51693 650 aa29.61■■■□□ 2.33
C9orf3-213ENST00000471978 TIAM2Q8IVF5 1701 aa29.61■■■□□ 2.33
C9orf3-213ENST00000471978 FER1L6Q2WGJ9 1857 aa29.61■■■□□ 2.33
C9orf3-213ENST00000471978 SOGA3Q5TF21 947 aa29.6■■■□□ 2.33
C9orf3-213ENST00000471978 TAOK3Q9H2K8 898 aa29.6■■■□□ 2.33
C9orf3-213ENST00000471978 BABAM1Q9NWV8 329 aa29.6■■■□□ 2.33
C9orf3-213ENST00000471978 CACNA1SQ13698 1873 aa29.59■■■□□ 2.33
C9orf3-213ENST00000471978 WDR43Q15061 677 aaKnown RBP eCLIP29.59■■■□□ 2.33
C9orf3-213ENST00000471978 NEUROD2Q15784 382 aa29.59■■■□□ 2.33
C9orf3-213ENST00000471978 ERBB4Q15303 1308 aa29.59■■■□□ 2.33
C9orf3-213ENST00000471978 LTBP3Q9NS15 1303 aa29.59■■■□□ 2.33
C9orf3-213ENST00000471978 ARFGEF2Q9Y6D5 1785 aa29.59■■■□□ 2.33
C9orf3-213ENST00000471978 ERFEQ4G0M1 354 aa29.58■■■□□ 2.33
C9orf3-213ENST00000471978 ZBTB3Q9H5J0 574 aa29.58■■■□□ 2.33
C9orf3-213ENST00000471978 FSTL1Q12841 308 aa29.57■■■□□ 2.32
C9orf3-213ENST00000471978 NYXQ9GZU5 481 aa29.57■■■□□ 2.32
C9orf3-213ENST00000471978 EIF2S2P20042 333 aaKnown RBP29.56■■■□□ 2.32
C9orf3-213ENST00000471978 RUNDC1Q96C34 613 aa29.56■■■□□ 2.32
C9orf3-213ENST00000471978 NUP98P52948 1817 aa29.56■■■□□ 2.32
C9orf3-213ENST00000471978 VEGFAP15692 232 aaPredicted RBP29.55■■■□□ 2.32
C9orf3-213ENST00000471978 DPY19L2Q6NUT2 758 aa29.55■■■□□ 2.32
C9orf3-213ENST00000471978 C7orf43Q8WVR3 580 aa29.55■■■□□ 2.32
C9orf3-213ENST00000471978 GPTP24298 496 aa29.54■■■□□ 2.32
C9orf3-213ENST00000471978 NUTM1Q86Y26 1132 aa29.54■■■□□ 2.32
C9orf3-213ENST00000471978 ADAMTS8Q9UP79 889 aa29.54■■■□□ 2.32
C9orf3-213ENST00000471978 CCDC93Q567U6 631 aa29.53■■■□□ 2.32
C9orf3-213ENST00000471978 DICER1Q9UPY3 1922 aaKnown RBP29.52■■■□□ 2.32
C9orf3-213ENST00000471978 ALDH1B1P30837 517 aa29.52■■■□□ 2.32
C9orf3-213ENST00000471978 PDIA6Q15084 440 aa29.52■■■□□ 2.32
C9orf3-213ENST00000471978 PRKRIP1Q9H875 184 aaPredicted RBP29.52■■■□□ 2.32
C9orf3-213ENST00000471978 ABCC12Q96J65 1359 aa29.52■■■□□ 2.32
C9orf3-213ENST00000471978 UBN2Q6ZU65 1347 aa29.51■■■□□ 2.32
C9orf3-213ENST00000471978 GIGYF2Q6Y7W6 1299 aaKnown RBP29.51■■■□□ 2.31
C9orf3-213ENST00000471978 LRP10Q7Z4F1 713 aa29.51■■■□□ 2.31
C9orf3-213ENST00000471978 ZNF34Q8IZ26 560 aa29.51■■■□□ 2.31
C9orf3-213ENST00000471978 SMC1BQ8NDV3 1235 aa29.51■■■□□ 2.31
C9orf3-213ENST00000471978 TRIM35Q9UPQ4 493 aa29.51■■■□□ 2.31
C9orf3-213ENST00000471978 SUSD4Q5VX71 490 aa29.5■■■□□ 2.31
C9orf3-213ENST00000471978 IBTKQ9P2D0 1353 aaPredicted RBP29.5■■■□□ 2.31
C9orf3-213ENST00000471978 CHL1O00533 1208 aa29.49■■■□□ 2.31
C9orf3-213ENST00000471978 ANXA1P04083 346 aa29.49■■■□□ 2.31
C9orf3-213ENST00000471978 PROSER3Q2NL68 480 aa29.49■■■□□ 2.31
C9orf3-213ENST00000471978 LAS1LQ9Y4W2 734 aaKnown RBP29.49■■■□□ 2.31
C9orf3-213ENST00000471978 CRY2Q49AN0 593 aa29.48■■■□□ 2.31
C9orf3-213ENST00000471978 OLFM4Q6UX06 510 aa29.48■■■□□ 2.31
C9orf3-213ENST00000471978 NECTIN2Q92692 538 aa29.48■■■□□ 2.31
C9orf3-213ENST00000471978 POTECB2RU33 542 aa29.47■■■□□ 2.31
C9orf3-213ENST00000471978 FKBP4Q02790 459 aaKnown RBP eCLIP29.47■■■□□ 2.313e-6■■□□□ 13.3
C9orf3-213ENST00000471978 WDR90Q96KV7 1748 aa29.46■■■□□ 2.31
C9orf3-213ENST00000471978 RTKN2Q8IZC4 609 aa29.46■■■□□ 2.31
C9orf3-213ENST00000471978 DNAJC5GQ8N7S2 189 aa29.46■■■□□ 2.31
C9orf3-213ENST00000471978 NTSR2O95665 410 aa29.45■■■□□ 2.31
C9orf3-213ENST00000471978 KRT24Q2M2I5 525 aa29.45■■■□□ 2.31
C9orf3-213ENST00000471978 PPP1R42Q7Z4L9 355 aa29.45■■■□□ 2.31
C9orf3-213ENST00000471978 RPGRQ92834 1020 aaKnown RBP29.45■■■□□ 2.31
C9orf3-213ENST00000471978 RIC1Q4ADV7 1423 aa29.45■■■□□ 2.3
C9orf3-213ENST00000471978 PARP10Q53GL7 1025 aa29.44■■■□□ 2.3
C9orf3-213ENST00000471978 ZNF277Q9NRM2 450 aaPredicted RBP29.44■■■□□ 2.3
C9orf3-213ENST00000471978 DDNO94850 711 aaPredicted RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms