RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 ZBTB3Q9H5J0 574 aa16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 NIP7Q9Y221 180 aaKnown RBP eCLIP16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
PPP1R3F-204ENST00000471261 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
PPP1R3F-204ENST00000471261 PROSER3Q2NL68 480 aa16.4■□□□□ 0.22
PPP1R3F-204ENST00000471261 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
PPP1R3F-204ENST00000471261 SALL2Q9Y467 1007 aaPredicted RBP16.4■□□□□ 0.22
PPP1R3F-204ENST00000471261 MAP3K15Q6ZN16 1313 aa16.4■□□□□ 0.22
PPP1R3F-204ENST00000471261 ZNF853P0CG23 659 aa16.39■□□□□ 0.21
PPP1R3F-204ENST00000471261 ST5P78524 1137 aa16.39■□□□□ 0.21
PPP1R3F-204ENST00000471261 PDIA6Q15084 440 aa16.39■□□□□ 0.21
PPP1R3F-204ENST00000471261 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
PPP1R3F-204ENST00000471261 HDGFL1Q5TGJ6 251 aa16.39■□□□□ 0.21
PPP1R3F-204ENST00000471261 C2CD5Q86YS7 1000 aa16.39■□□□□ 0.21
PPP1R3F-204ENST00000471261 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
PPP1R3F-204ENST00000471261 AFDNP55196 1824 aaKnown RBP16.38■□□□□ 0.21
PPP1R3F-204ENST00000471261 ERVV-1B6SEH8 477 aa16.38■□□□□ 0.21
PPP1R3F-204ENST00000471261 H0YIN7 160 aa16.38■□□□□ 0.21
PPP1R3F-204ENST00000471261 AIMP1Q12904 312 aaKnown RBP16.38■□□□□ 0.21
PPP1R3F-204ENST00000471261 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
PPP1R3F-204ENST00000471261 KIAA1551Q9HCM1 1747 aa16.38■□□□□ 0.21
PPP1R3F-204ENST00000471261 NRXN2Q9P2S2 1712 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 RGL2O15211 777 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 HOXB7P09629 217 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 PDE6BP35913 854 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 ARHGAP27Q6ZUM4 889 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 WWC1Q8IX03 1113 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 BRIP1Q9BX63 1249 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
PPP1R3F-204ENST00000471261 GPTP24298 496 aa16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 GTF2E1P29083 439 aaPredicted RBP16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 CCDC27Q2M243 656 aa16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 TSR2Q969E8 191 aaKnown RBP16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 ZNF622Q969S3 477 aaKnown RBP eCLIP16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 DDX21Q9NR30 783 aaKnown RBP eCLIP16.36■□□□□ 0.21
PPP1R3F-204ENST00000471261 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
PPP1R3F-204ENST00000471261 LRP10Q7Z4F1 713 aa16.35■□□□□ 0.21
PPP1R3F-204ENST00000471261 CHD4Q14839 1912 aa16.35■□□□□ 0.21
PPP1R3F-204ENST00000471261 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
PPP1R3F-204ENST00000471261 TTLL6Q8N841 843 aa16.34■□□□□ 0.21
PPP1R3F-204ENST00000471261 DBF4Q9UBU7 674 aaPredicted RBP16.34■□□□□ 0.21
PPP1R3F-204ENST00000471261 C8orf58Q8NAV2 365 aa16.33■□□□□ 0.2
PPP1R3F-204ENST00000471261 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
PPP1R3F-204ENST00000471261 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
PPP1R3F-204ENST00000471261 ATP10DQ9P241 1426 aa16.32■□□□□ 0.2
PPP1R3F-204ENST00000471261 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
PPP1R3F-204ENST00000471261 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
PPP1R3F-204ENST00000471261 HYPKQ9NX55 129 aa16.31■□□□□ 0.2
PPP1R3F-204ENST00000471261 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
PPP1R3F-204ENST00000471261 ERFEQ4G0M1 354 aa16.3■□□□□ 0.2
PPP1R3F-204ENST00000471261 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
PPP1R3F-204ENST00000471261 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
PPP1R3F-204ENST00000471261 ZNF34Q8IZ26 560 aa16.3■□□□□ 0.2
PPP1R3F-204ENST00000471261 TSPYL6Q8N831 410 aa16.3■□□□□ 0.2
PPP1R3F-204ENST00000471261 BRCA1P38398 1863 aaKnown RBP16.3■□□□□ 0.2
PPP1R3F-204ENST00000471261 IL16Q14005 1332 aa16.29■□□□□ 0.2
PPP1R3F-204ENST00000471261 SRGNP10124 158 aa16.29■□□□□ 0.2
PPP1R3F-204ENST00000471261 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
PPP1R3F-204ENST00000471261 MASTLQ96GX5 879 aa16.29■□□□□ 0.2
PPP1R3F-204ENST00000471261 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
PPP1R3F-204ENST00000471261 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 HSP90AB3PQ58FF7 597 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 CCDC30Q5VVM6 783 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 STYK1Q6J9G0 422 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 ANKRD13DQ6ZTN6 518 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 WDR63Q8IWG1 891 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 CHMP4AQ9BY43 222 aa16.28■□□□□ 0.2
PPP1R3F-204ENST00000471261 ABCC12Q96J65 1359 aa16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 NUP98P52948 1817 aa16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 C21orf2O43822 256 aa16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 NPR1P16066 1061 aa16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 RASSF7Q02833 373 aa16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 PLBD2Q8NHP8 589 aa16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.2
PPP1R3F-204ENST00000471261 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 NTSR2O95665 410 aa16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 TWISTNBQ3B726 338 aaPredicted RBP16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 C9orf131Q5VYM1 1079 aa16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 DLEC1Q9Y238 1755 aa16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 IBTKQ9P2D0 1353 aaPredicted RBP16.26■□□□□ 0.19
PPP1R3F-204ENST00000471261 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
PPP1R3F-204ENST00000471261 ARFGEF1Q9Y6D6 1849 aa16.25■□□□□ 0.19
PPP1R3F-204ENST00000471261 KLRG2A4D1S0 409 aaPredicted RBP16.25■□□□□ 0.19
PPP1R3F-204ENST00000471261 NLRP10Q86W26 655 aa16.25■□□□□ 0.19
PPP1R3F-204ENST00000471261 STK31Q9BXU1 1019 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms