RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CHPF2Q9P2E5 772 aa25.57■■□□□ 1.68
HDAC7-220ENST00000471235 NFIXQ14938 502 aa25.56■■□□□ 1.68
HDAC7-220ENST00000471235 TTLL7Q6ZT98 887 aa25.56■■□□□ 1.68
HDAC7-220ENST00000471235 DLEC1Q9Y238 1755 aa25.56■■□□□ 1.68
HDAC7-220ENST00000471235 POLRMTO00411 1230 aaKnown RBP25.55■■□□□ 1.68
HDAC7-220ENST00000471235 MYH16Q9H6N6 1097 aa25.55■■□□□ 1.68
HDAC7-220ENST00000471235 PARP3Q9Y6F1 533 aa25.55■■□□□ 1.68
HDAC7-220ENST00000471235 TBC1D9BQ66K14 1250 aa25.54■■□□□ 1.68
HDAC7-220ENST00000471235 SYT17Q9BSW7 474 aa25.54■■□□□ 1.68
HDAC7-220ENST00000471235 MAP3K15Q6ZN16 1313 aa25.54■■□□□ 1.68
HDAC7-220ENST00000471235 GOLGA2Q08379 1002 aa25.53■■□□□ 1.68
HDAC7-220ENST00000471235 TWISTNBQ3B726 338 aaPredicted RBP25.53■■□□□ 1.68
HDAC7-220ENST00000471235 KIF6Q6ZMV9 814 aa25.53■■□□□ 1.68
HDAC7-220ENST00000471235 RGL2O15211 777 aa25.52■■□□□ 1.68
HDAC7-220ENST00000471235 DBF4Q9UBU7 674 aaPredicted RBP25.52■■□□□ 1.68
HDAC7-220ENST00000471235 ZNF652Q9Y2D9 606 aa25.52■■□□□ 1.68
HDAC7-220ENST00000471235 COL11A2P13942 1736 aaPredicted RBP25.51■■□□□ 1.68
HDAC7-220ENST00000471235 EXOSC9Q06265 439 aaKnown RBP25.51■■□□□ 1.67
HDAC7-220ENST00000471235 HLFQ16534 295 aa25.51■■□□□ 1.67
HDAC7-220ENST00000471235 CLEC4GQ6UXB4 293 aa25.51■■□□□ 1.67
HDAC7-220ENST00000471235 BICDL1Q6ZP65 573 aa25.51■■□□□ 1.67
HDAC7-220ENST00000471235 CARMIL3Q8ND23 1372 aa25.51■■□□□ 1.67
HDAC7-220ENST00000471235 ATP10DQ9P241 1426 aa25.51■■□□□ 1.67
HDAC7-220ENST00000471235 NLGN2Q8NFZ4 835 aa25.5■■□□□ 1.67
HDAC7-220ENST00000471235 XAGE3Q8WTP9 111 aa25.5■■□□□ 1.67
HDAC7-220ENST00000471235 ZBTB3Q9H5J0 574 aa25.5■■□□□ 1.67
HDAC7-220ENST00000471235 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
HDAC7-220ENST00000471235 ERVV-1B6SEH8 477 aa25.49■■□□□ 1.67
HDAC7-220ENST00000471235 PXDNLA1KZ92 1463 aa25.48■■□□□ 1.67
HDAC7-220ENST00000471235 E9PSI1 815 aa25.48■■□□□ 1.67
HDAC7-220ENST00000471235 CCDC30Q5VVM6 783 aa25.48■■□□□ 1.67
HDAC7-220ENST00000471235 COPS6Q7L5N1 327 aa25.48■■□□□ 1.67
HDAC7-220ENST00000471235 CACNA1SQ13698 1873 aa25.48■■□□□ 1.67
HDAC7-220ENST00000471235 SERPINB2P05120 415 aa25.47■■□□□ 1.67
HDAC7-220ENST00000471235 SLFN5Q08AF3 891 aa25.47■■□□□ 1.67
HDAC7-220ENST00000471235 AIMP1Q12904 312 aaKnown RBP25.47■■□□□ 1.67
HDAC7-220ENST00000471235 HYPKQ9NX55 129 aa25.47■■□□□ 1.67
HDAC7-220ENST00000471235 TNRC6CQ9HCJ0 1690 aaKnown RBP25.46■■□□□ 1.67
HDAC7-220ENST00000471235 HNRNPUQ00839 825 aaKnown RBP eCLIP25.46■■□□□ 1.67
HDAC7-220ENST00000471235 CDCA7LQ96GN5 454 aa25.46■■□□□ 1.67
HDAC7-220ENST00000471235 CHMP4AQ9BY43 222 aa25.46■■□□□ 1.67
HDAC7-220ENST00000471235 VAMP4O75379 141 aa25.45■■□□□ 1.66
HDAC7-220ENST00000471235 SETDB2Q96T68 719 aa25.45■■□□□ 1.66
HDAC7-220ENST00000471235 NIP7Q9Y221 180 aaKnown RBP eCLIP25.45■■□□□ 1.66
HDAC7-220ENST00000471235 TCERG1O14776 1098 aaKnown RBP25.44■■□□□ 1.66
HDAC7-220ENST00000471235 GIGYF2Q6Y7W6 1299 aaKnown RBP25.44■■□□□ 1.66
HDAC7-220ENST00000471235 ARFGEF1Q9Y6D6 1849 aa25.44■■□□□ 1.66
HDAC7-220ENST00000471235 LAMB2P55268 1798 aa25.44■■□□□ 1.66
HDAC7-220ENST00000471235 PHAXQ9H814 394 aaKnown RBP25.43■■□□□ 1.66
HDAC7-220ENST00000471235 STK31Q9BXU1 1019 aa25.42■■□□□ 1.66
HDAC7-220ENST00000471235 UBN2Q6ZU65 1347 aa25.41■■□□□ 1.66
HDAC7-220ENST00000471235 PRR5LQ6MZQ0 368 aa25.41■■□□□ 1.66
HDAC7-220ENST00000471235 GPTP24298 496 aa25.4■■□□□ 1.66
HDAC7-220ENST00000471235 TRMT2AQ8IZ69 625 aaKnown RBP25.4■■□□□ 1.66
HDAC7-220ENST00000471235 PLBD2Q8NHP8 589 aa25.4■■□□□ 1.66
HDAC7-220ENST00000471235 IBTKQ9P2D0 1353 aaPredicted RBP25.4■■□□□ 1.66
HDAC7-220ENST00000471235 DDX60Q8IY21 1712 aaKnown RBP25.4■■□□□ 1.66
HDAC7-220ENST00000471235 ZNF34Q8IZ26 560 aa25.39■■□□□ 1.66
HDAC7-220ENST00000471235 CNBD1Q8NA66 436 aa25.39■■□□□ 1.66
HDAC7-220ENST00000471235 NBPF5PQ86XG9 351 aaPredicted RBP25.38■■□□□ 1.65
HDAC7-220ENST00000471235 CHD4Q14839 1912 aa25.37■■□□□ 1.65
HDAC7-220ENST00000471235 TGFB2P61812 414 aa25.37■■□□□ 1.65
HDAC7-220ENST00000471235 ANKRD13DQ6ZTN6 518 aa25.37■■□□□ 1.65
HDAC7-220ENST00000471235 CCDC24Q8N4L8 307 aa25.37■■□□□ 1.65
HDAC7-220ENST00000471235 FAM177BA6PVY3 158 aa25.36■■□□□ 1.65
HDAC7-220ENST00000471235 HSP90AB3PQ58FF7 597 aa25.36■■□□□ 1.65
HDAC7-220ENST00000471235 G2E3Q7L622 706 aa25.36■■□□□ 1.65
HDAC7-220ENST00000471235 ABCC12Q96J65 1359 aa25.35■■□□□ 1.65
HDAC7-220ENST00000471235 SLC4A2P04920 1241 aa25.35■■□□□ 1.65
HDAC7-220ENST00000471235 DPEP1P16444 411 aa25.35■■□□□ 1.65
HDAC7-220ENST00000471235 ST5P78524 1137 aa25.35■■□□□ 1.65
HDAC7-220ENST00000471235 TCIRG1Q13488 830 aa25.35■■□□□ 1.65
HDAC7-220ENST00000471235 ZBED9Q6R2W3 1325 aa25.35■■□□□ 1.65
HDAC7-220ENST00000471235 ADCY9O60503 1353 aa25.34■■□□□ 1.65
HDAC7-220ENST00000471235 A0A0G2JLW4 131 aa25.34■■□□□ 1.65
HDAC7-220ENST00000471235 NPHP1O15259 732 aa25.34■■□□□ 1.65
HDAC7-220ENST00000471235 NTSR2O95665 410 aa25.33■■□□□ 1.65
HDAC7-220ENST00000471235 CHRNA5P30532 468 aa25.33■■□□□ 1.65
HDAC7-220ENST00000471235 RIC1Q4ADV7 1423 aa25.33■■□□□ 1.65
HDAC7-220ENST00000471235 PARP10Q53GL7 1025 aa25.33■■□□□ 1.65
HDAC7-220ENST00000471235 SUSD4Q5VX71 490 aa25.33■■□□□ 1.65
HDAC7-220ENST00000471235 RIC3Q7Z5B4 369 aa25.33■■□□□ 1.65
HDAC7-220ENST00000471235 NYXQ9GZU5 481 aa25.33■■□□□ 1.65
HDAC7-220ENST00000471235 DDX58O95786 925 aaKnown RBP25.32■■□□□ 1.64
HDAC7-220ENST00000471235 FLIIQ13045 1269 aa25.32■■□□□ 1.64
HDAC7-220ENST00000471235 TPTE2Q6XPS3 522 aa25.32■■□□□ 1.64
HDAC7-220ENST00000471235 WWC3Q9ULE0 1092 aa25.32■■□□□ 1.64
HDAC7-220ENST00000471235 MYH3P11055 1940 aa25.31■■□□□ 1.64
HDAC7-220ENST00000471235 NLRP10Q86W26 655 aa25.31■■□□□ 1.64
HDAC7-220ENST00000471235 PELP1Q8IZL8 1130 aaKnown RBP25.31■■□□□ 1.64
HDAC7-220ENST00000471235 ISCA1Q9BUE6 129 aa25.31■■□□□ 1.64
HDAC7-220ENST00000471235 BRIP1Q9BX63 1249 aa25.31■■□□□ 1.64
HDAC7-220ENST00000471235 YBX3P16989 372 aaKnown RBP eCLIP25.3■■□□□ 1.64
HDAC7-220ENST00000471235 KCNA3P22001 575 aa25.3■■□□□ 1.64
HDAC7-220ENST00000471235 NUTM1Q86Y26 1132 aa25.3■■□□□ 1.64
HDAC7-220ENST00000471235 SLX4Q8IY92 1834 aa25.29■■□□□ 1.64
HDAC7-220ENST00000471235 KSR2Q6VAB6 950 aa25.29■■□□□ 1.64
HDAC7-220ENST00000471235 PPP1R42Q7Z4L9 355 aa25.29■■□□□ 1.64
HDAC7-220ENST00000471235 C2CD5Q86YS7 1000 aa25.29■■□□□ 1.64
HDAC7-220ENST00000471235 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms