RNA–Protein interactions for RNA: ENST00000470682.5

TMEM50B-207, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 364 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-207ENST00000470682 PPP2R1AP30153 589 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 RFC5P40937 340 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 ATN1P54259 1190 aaPredicted RBP4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 PDE4CQ08493 712 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 ZNF827Q17R98 1081 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 TMEM92Q6UXU6 159 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 METTL3Q86U44 580 aaKnown RBP4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 LRRC4BQ9NT99 713 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 ITGB4P16144 1822 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 RGPD3A6NKT7 1758 aaPredicted RBP4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 RGPD4Q7Z3J3 1758 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 PAPPAQ13219 1627 aa4.32□□□□□ -1.72
TMEM50B-207ENST00000470682 KAT6BQ8WYB5 2073 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 PARD3Q8TEW0 1356 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 NPC1L1Q9UHC9 1359 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 TMCO4Q5TGY1 634 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 NBPF14Q5TI25 921 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 TYW1BQ6NUM6 668 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 ZNF530Q6P9A1 599 aaPredicted RBP4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 SMIM5Q71RC9 77 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 IFNL2Q8IZJ0 200 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 SLAIN1Q8ND83 568 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 TBC1D2Q9BYX2 928 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 PRM3Q9NNZ6 103 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 SNRKQ9NRH2 765 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 SPG7Q9UQ90 795 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 LY75O60449 1722 aa4.31□□□□□ -1.72
TMEM50B-207ENST00000470682 KDM6AO15550 1401 aaPredicted RBP4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 TUBGCP6Q96RT7 1819 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 KDRP35968 1356 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 PALLDQ8WX93 1383 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 PATL2C9JE40 543 aaKnown RBP4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 ATMINO43313 823 aaPredicted RBP4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 ZBTB7AO95365 584 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 SLC34A2O95436 690 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 MTHFSDQ2M296 383 aaKnown RBP4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 TSR1Q2NL82 804 aaKnown RBP4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 PLEKHO1Q53GL0 409 aaPredicted RBP4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 PXYLP1Q8TE99 480 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 PIGBQ92521 554 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 FBXW7Q969H0 707 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 LGR6Q9HBX8 967 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 STK32BQ9NY57 414 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 CCNL1Q9UK58 526 aaPredicted RBP4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 PCDHGA10Q9Y5H3 936 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 ADGRG1Q9Y653 693 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 CASZ1Q86V15 1759 aa4.3□□□□□ -1.72
TMEM50B-207ENST00000470682 C5P01031 1676 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 U2AF1L5P0DN76 240 aaPredicted RBP4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 PRKAR2BP31323 418 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 ZEB1P37275 1124 aaPredicted RBP4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 U2AF1Q01081 240 aaKnown RBP eCLIP4.29□□□□□ -1.725e-19■■■□□ 18.8
TMEM50B-207ENST00000470682 SLC15A2Q16348 729 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 FAM161AQ3B820 660 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 C1orf141Q5JVX7 400 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 PPP2R2DQ66LE6 453 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 ASTLQ6HA08 431 aaPredicted RBP4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 AMIGO3Q86WK7 504 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 NLRP7Q8WX94 980 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 PHACTR3Q96KR7 559 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 CALR3Q96L12 384 aaKnown RBP4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 CFAP53Q96M91 514 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 GDPD2Q9HCC8 539 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 ATG3Q9NT62 314 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 TMOD3Q9NYL9 352 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 ASAP1Q9ULH1 1129 aa4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 VIRMAQ69YN4 1812 aaKnown RBP4.29□□□□□ -1.72
TMEM50B-207ENST00000470682 LRP5O75197 1615 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 TAF1LQ8IZX4 1826 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 PNPLA7Q6ZV29 1317 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 SCN11AQ9UI33 1791 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 SENP3-EIF4A1A0A087X0R7 540 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 CABP4P57796 275 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 SLC39A6Q13433 755 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 IRF5Q13568 498 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 ITPK1Q13572 414 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 TUSC1Q2TAM9 212 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 AMOTQ4VCS5 1084 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 AKAP4Q5JQC9 854 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 PADI6Q6TGC4 694 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 RIC3Q7Z5B4 369 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 MTMR14Q8NCE2 650 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 LINC00116Q8NCU8 138 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 RGS22Q8NE09 1264 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 SLC4A9Q96Q91 983 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 GZF1Q9H116 711 aaPredicted RBP4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 RBM27Q9P2N5 1060 aaKnown RBP4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 C4BP0C0L5 1744 aa4.28□□□□□ -1.72
TMEM50B-207ENST00000470682 TJP1Q07157 1748 aa4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 LOC102724428A0A0B4J2F2 783 aa4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 RNMTO43148 476 aaKnown RBP4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 PTCD1O75127 700 aaKnown RBP4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 SEC24BO95487 1268 aa4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 HSP90AB1P08238 724 aaKnown RBP4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 ATP6V1AP38606 617 aa4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 ABL2P42684 1182 aa4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 MFAP1P55081 439 aaKnown RBP4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 SIK1P57059 783 aa4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 DCTN1Q14203 1278 aa4.27□□□□□ -1.73
TMEM50B-207ENST00000470682 CCDC184Q52MB2 194 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms