RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 LNPKQ9C0E8 428 aa9.94□□□□□ -0.82
SMC4-212ENST00000470240 USP54Q70EL1 1684 aa9.93□□□□□ -0.82
SMC4-212ENST00000470240 CEP170BQ9Y4F5 1589 aaPredicted RBP9.93□□□□□ -0.82
SMC4-212ENST00000470240 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
SMC4-212ENST00000470240 CHL1O00533 1208 aa9.93□□□□□ -0.82
SMC4-212ENST00000470240 CEBPAP49715 358 aaPredicted RBP9.93□□□□□ -0.82
SMC4-212ENST00000470240 INTS3Q68E01 1043 aaKnown RBP9.93□□□□□ -0.82
SMC4-212ENST00000470240 GPIHBP1Q8IV16 184 aa9.93□□□□□ -0.82
SMC4-212ENST00000470240 RPAP2Q8IXW5 612 aaPredicted RBP9.93□□□□□ -0.82
SMC4-212ENST00000470240 RTL1A6NKG5 1358 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 MAP3K19Q56UN5 1328 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 FAM83GA6ND36 823 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 RNF40O75150 1001 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 CCT4P50991 539 aaKnown RBP9.92□□□□□ -0.82
SMC4-212ENST00000470240 HIC1Q14526 733 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 SAMD7Q7Z3H4 446 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 C8orf58Q8NAV2 365 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 TSPYL4Q9UJ04 414 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 PIK3C2AO00443 1686 aa9.92□□□□□ -0.82
SMC4-212ENST00000470240 KDRP35968 1356 aa9.91□□□□□ -0.82
SMC4-212ENST00000470240 CDC45O75419 566 aa9.91□□□□□ -0.82
SMC4-212ENST00000470240 DCTN1Q14203 1278 aa9.91□□□□□ -0.82
SMC4-212ENST00000470240 HSP90AB2PQ58FF8 381 aa9.91□□□□□ -0.82
SMC4-212ENST00000470240 AEBP1Q8IUX7 1158 aa9.91□□□□□ -0.82
SMC4-212ENST00000470240 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
SMC4-212ENST00000470240 HPS5Q9UPZ3 1129 aa9.91□□□□□ -0.82
SMC4-212ENST00000470240 RGPD8O14715 1765 aaPredicted RBP9.91□□□□□ -0.82
SMC4-212ENST00000470240 IGSF1Q8N6C5 1336 aa9.9□□□□□ -0.82
SMC4-212ENST00000470240 PTMSP20962 102 aa9.9□□□□□ -0.82
SMC4-212ENST00000470240 MCM10Q7L590 875 aa9.9□□□□□ -0.82
SMC4-212ENST00000470240 RBM46Q8TBY0 533 aaKnown RBP9.9□□□□□ -0.82
SMC4-212ENST00000470240 TBC1D2Q9BYX2 928 aa9.9□□□□□ -0.82
SMC4-212ENST00000470240 BABAM1Q9NWV8 329 aa9.9□□□□□ -0.82
SMC4-212ENST00000470240 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
SMC4-212ENST00000470240 CHMP5Q9NZZ3 219 aa9.9□□□□□ -0.82
SMC4-212ENST00000470240 TSR3Q9UJK0 312 aaKnown RBP9.9□□□□□ -0.82
SMC4-212ENST00000470240 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.83
SMC4-212ENST00000470240 CACNA1FO60840 1977 aa9.89□□□□□ -0.83
SMC4-212ENST00000470240 HSP90AA1P07900 732 aaKnown RBP9.89□□□□□ -0.83
SMC4-212ENST00000470240 HSP90AB1P08238 724 aaKnown RBP9.89□□□□□ -0.83
SMC4-212ENST00000470240 RBM25P49756 843 aaKnown RBP9.89□□□□□ -0.83
SMC4-212ENST00000470240 CCDC30Q5VVM6 783 aa9.89□□□□□ -0.83
SMC4-212ENST00000470240 C14orf37Q86TY3 774 aa9.89□□□□□ -0.83
SMC4-212ENST00000470240 ANKLE2Q86XL3 938 aa9.89□□□□□ -0.83
SMC4-212ENST00000470240 ANKRD44Q8N8A2 993 aa9.89□□□□□ -0.83
SMC4-212ENST00000470240 C1orf115Q9H7X2 142 aa9.89□□□□□ -0.83
SMC4-212ENST00000470240 CRB1P82279 1406 aa9.89□□□□□ -0.83
SMC4-212ENST00000470240 MAP3K5Q99683 1374 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 DDX11L8A8MPP1 907 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 GNAT3A8MTJ3 354 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 GNPATO15228 680 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 FRAT2O75474 233 aaPredicted RBP9.88□□□□□ -0.83
SMC4-212ENST00000470240 PPP4CP60510 307 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 NYAP1Q6ZVC0 841 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 ABTB2Q8N961 1025 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 SNX21Q969T3 373 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 WBP1LQ9NX94 342 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 LRRC37A3O60309 1634 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 MSH6P52701 1360 aa9.88□□□□□ -0.83
SMC4-212ENST00000470240 HOXC9P31274 260 aa9.87□□□□□ -0.83
SMC4-212ENST00000470240 MTHFSDQ2M296 383 aaKnown RBP9.87□□□□□ -0.83
SMC4-212ENST00000470240 L1TD1Q5T7N2 865 aaKnown RBP9.87□□□□□ -0.83
SMC4-212ENST00000470240 KCNH5Q8NCM2 988 aa9.87□□□□□ -0.83
SMC4-212ENST00000470240 EYA1Q99502 592 aa9.87□□□□□ -0.83
SMC4-212ENST00000470240 DCTPP1Q9H773 170 aa9.87□□□□□ -0.83
SMC4-212ENST00000470240 ADGRG1Q9Y653 693 aa9.87□□□□□ -0.83
SMC4-212ENST00000470240 GNAI3P08754 354 aa9.86□□□□□ -0.83
SMC4-212ENST00000470240 KCNA6P17658 529 aa9.86□□□□□ -0.83
SMC4-212ENST00000470240 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
SMC4-212ENST00000470240 CHD2O14647 1828 aaKnown RBP9.86□□□□□ -0.83
SMC4-212ENST00000470240 FAM208AQ9UK61 1670 aaKnown RBP9.86□□□□□ -0.83
SMC4-212ENST00000470240 PXDNLA1KZ92 1463 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 ADGRL3Q9HAR2 1447 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 REC8O95072 547 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 GNAI2P04899 355 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 DNAJB2P25686 324 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 CEP85Q6P2H3 762 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 SLC4A10Q6U841 1118 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 GBP4Q96PP9 640 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 LTN1O94822 1766 aa9.85□□□□□ -0.83
SMC4-212ENST00000470240 RGS12O14924 1447 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 ATP10DQ9P241 1426 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 N4BP2Q86UW6 1770 aaPredicted RBP9.84□□□□□ -0.83
SMC4-212ENST00000470240 OATP04181 439 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 PSME1Q06323 249 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 TAF7Q15545 349 aaPredicted RBP9.84□□□□□ -0.83
SMC4-212ENST00000470240 TTC22Q5TAA0 569 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 TBC1D9Q6ZT07 1266 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 SLF2Q8IX21 1173 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 ANTXR1Q9H6X2 564 aa9.84□□□□□ -0.83
SMC4-212ENST00000470240 GOLGA6L22H0YM25 854 aa9.83□□□□□ -0.84
SMC4-212ENST00000470240 GPR37O15354 613 aa9.83□□□□□ -0.84
SMC4-212ENST00000470240 FKBP5Q13451 457 aaPredicted RBP9.83□□□□□ -0.84
SMC4-212ENST00000470240 RABEP1Q15276 862 aa9.83□□□□□ -0.84
SMC4-212ENST00000470240 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
SMC4-212ENST00000470240 SIRT2Q8IXJ6 389 aa9.83□□□□□ -0.84
SMC4-212ENST00000470240 HDAC5Q9UQL6 1122 aa9.83□□□□□ -0.84
SMC4-212ENST00000470240 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
SMC4-212ENST00000470240 K7ELQ4 463 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms