RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CLEC4GQ6UXB4 293 aa32.44■■■□□ 2.78
PTCH1-210ENST00000468211 RRAGCQ9HB90 399 aa32.44■■■□□ 2.78
PTCH1-210ENST00000468211 ARFGEF2Q9Y6D5 1785 aa32.43■■■□□ 2.78
PTCH1-210ENST00000468211 PDZRN3Q9UPQ7 1066 aa32.43■■■□□ 2.78
PTCH1-210ENST00000468211 NPHP1O15259 732 aa32.42■■■□□ 2.78
PTCH1-210ENST00000468211 C21orf2O43822 256 aa32.42■■■□□ 2.78
PTCH1-210ENST00000468211 DICER1Q9UPY3 1922 aaKnown RBP32.41■■■□□ 2.78
PTCH1-210ENST00000468211 ST5P78524 1137 aa32.41■■■□□ 2.78
PTCH1-210ENST00000468211 SRGNP10124 158 aa32.4■■■□□ 2.78
PTCH1-210ENST00000468211 EIF4A1P60842 406 aaKnown RBP32.4■■■□□ 2.78
PTCH1-210ENST00000468211 HLFQ16534 295 aa32.4■■■□□ 2.78
PTCH1-210ENST00000468211 NBPF5PQ86XG9 351 aaPredicted RBP32.4■■■□□ 2.78
PTCH1-210ENST00000468211 PNISRQ8TF01 805 aaKnown RBP32.4■■■□□ 2.78
PTCH1-210ENST00000468211 RBM46Q8TBY0 533 aaKnown RBP32.39■■■□□ 2.78
PTCH1-210ENST00000468211 ZNF652Q9Y2D9 606 aa32.39■■■□□ 2.78
PTCH1-210ENST00000468211 NUP98P52948 1817 aa32.39■■■□□ 2.78
PTCH1-210ENST00000468211 MAPK8IP3Q9UPT6 1336 aa32.38■■■□□ 2.77
PTCH1-210ENST00000468211 ZC3H4Q9UPT8 1303 aaKnown RBP32.38■■■□□ 2.77
PTCH1-210ENST00000468211 RALBP1Q15311 655 aa32.37■■■□□ 2.77
PTCH1-210ENST00000468211 STYK1Q6J9G0 422 aa32.37■■■□□ 2.77
PTCH1-210ENST00000468211 NIP7Q9Y221 180 aaKnown RBP eCLIP32.37■■■□□ 2.77
PTCH1-210ENST00000468211 DDX10Q13206 875 aaKnown RBP32.36■■■□□ 2.77
PTCH1-210ENST00000468211 C16orf71Q8IYS4 520 aaPredicted RBP32.36■■■□□ 2.77
PTCH1-210ENST00000468211 NGEFQ8N5V2 710 aa32.36■■■□□ 2.77
PTCH1-210ENST00000468211 PRPF40BQ6NWY9 871 aaKnown RBP32.35■■■□□ 2.77
PTCH1-210ENST00000468211 PNNQ9H307 717 aaKnown RBP32.35■■■□□ 2.77
PTCH1-210ENST00000468211 GLTPD2A6NH11 291 aa32.34■■■□□ 2.77
PTCH1-210ENST00000468211 FAM177BA6PVY3 158 aa32.34■■■□□ 2.77
PTCH1-210ENST00000468211 RGL2O15211 777 aa32.34■■■□□ 2.77
PTCH1-210ENST00000468211 APLP1P51693 650 aa32.34■■■□□ 2.77
PTCH1-210ENST00000468211 CNKSR1Q969H4 720 aa32.34■■■□□ 2.77
PTCH1-210ENST00000468211 MASTLQ96GX5 879 aa32.34■■■□□ 2.77
PTCH1-210ENST00000468211 WDR90Q96KV7 1748 aa32.33■■■□□ 2.77
PTCH1-210ENST00000468211 RRP7AQ9Y3A4 280 aaKnown RBP32.32■■■□□ 2.76
PTCH1-210ENST00000468211 TPTE2Q6XPS3 522 aa32.31■■■□□ 2.76
PTCH1-210ENST00000468211 TTLL7Q6ZT98 887 aa32.31■■■□□ 2.76
PTCH1-210ENST00000468211 KLRG2A4D1S0 409 aaPredicted RBP32.3■■■□□ 2.76
PTCH1-210ENST00000468211 MYL6BP14649 208 aa32.29■■■□□ 2.76
PTCH1-210ENST00000468211 RIPK4P57078 832 aa32.29■■■□□ 2.76
PTCH1-210ENST00000468211 C7orf43Q8WVR3 580 aa32.29■■■□□ 2.76
PTCH1-210ENST00000468211 LTBP3Q9NS15 1303 aa32.28■■■□□ 2.76
PTCH1-210ENST00000468211 FSTL1Q12841 308 aa32.28■■■□□ 2.76
PTCH1-210ENST00000468211 DNAJC5GQ8N7S2 189 aa32.28■■■□□ 2.76
PTCH1-210ENST00000468211 TAOK3Q9H2K8 898 aa32.28■■■□□ 2.76
PTCH1-210ENST00000468211 ERFEQ4G0M1 354 aa32.27■■■□□ 2.76
PTCH1-210ENST00000468211 MAP3K15Q6ZN16 1313 aa32.26■■■□□ 2.76
PTCH1-210ENST00000468211 POTECB2RU33 542 aa32.26■■■□□ 2.75
PTCH1-210ENST00000468211 ERVV-1B6SEH8 477 aa32.26■■■□□ 2.75
PTCH1-210ENST00000468211 NPR1P16066 1061 aa32.26■■■□□ 2.75
PTCH1-210ENST00000468211 TMPOP42166 694 aaKnown RBP32.26■■■□□ 2.75
PTCH1-210ENST00000468211 HTRA3P83110 453 aa32.26■■■□□ 2.75
PTCH1-210ENST00000468211 TSPYL4Q9UJ04 414 aa32.26■■■□□ 2.75
PTCH1-210ENST00000468211 MYBBP1AQ9BQG0 1328 aaKnown RBP32.26■■■□□ 2.75
PTCH1-210ENST00000468211 VEGFAP15692 232 aaPredicted RBP32.25■■■□□ 2.75
PTCH1-210ENST00000468211 ABCC12Q96J65 1359 aa32.24■■■□□ 2.75
PTCH1-210ENST00000468211 OLFM4Q6UX06 510 aa32.24■■■□□ 2.75
PTCH1-210ENST00000468211 NUTM1Q86Y26 1132 aa32.23■■■□□ 2.75
PTCH1-210ENST00000468211 CCDC146Q8IYE0 955 aa32.23■■■□□ 2.75
PTCH1-210ENST00000468211 ZBTB3Q9H5J0 574 aa32.23■■■□□ 2.75
PTCH1-210ENST00000468211 KIF6Q6ZMV9 814 aa32.22■■■□□ 2.75
PTCH1-210ENST00000468211 GPTP24298 496 aa32.21■■■□□ 2.75
PTCH1-210ENST00000468211 SOGA3Q5TF21 947 aa32.21■■■□□ 2.75
PTCH1-210ENST00000468211 SMC1BQ8NDV3 1235 aa32.21■■■□□ 2.75
PTCH1-210ENST00000468211 UBN2Q6ZU65 1347 aa32.21■■■□□ 2.75
PTCH1-210ENST00000468211 GTF2E1P29083 439 aaPredicted RBP32.2■■■□□ 2.75
PTCH1-210ENST00000468211 PDIA6Q15084 440 aa32.2■■■□□ 2.75
PTCH1-210ENST00000468211 DPY19L2Q6NUT2 758 aa32.2■■■□□ 2.75
PTCH1-210ENST00000468211 LRP10Q7Z4F1 713 aa32.2■■■□□ 2.75
PTCH1-210ENST00000468211 EIF2S2P20042 333 aaKnown RBP32.18■■■□□ 2.74
PTCH1-210ENST00000468211 NEUROD2Q15784 382 aa32.18■■■□□ 2.74
PTCH1-210ENST00000468211 CCDC93Q567U6 631 aa32.18■■■□□ 2.74
PTCH1-210ENST00000468211 ERBB4Q15303 1308 aa32.18■■■□□ 2.74
PTCH1-210ENST00000468211 PROSER3Q2NL68 480 aa32.17■■■□□ 2.74
PTCH1-210ENST00000468211 SUSD4Q5VX71 490 aa32.17■■■□□ 2.74
PTCH1-210ENST00000468211 NYXQ9GZU5 481 aa32.17■■■□□ 2.74
PTCH1-210ENST00000468211 ANXA1P04083 346 aa32.16■■■□□ 2.74
PTCH1-210ENST00000468211 CRY2Q49AN0 593 aa32.16■■■□□ 2.74
PTCH1-210ENST00000468211 ZNF34Q8IZ26 560 aa32.16■■■□□ 2.74
PTCH1-210ENST00000468211 DDNO94850 711 aaPredicted RBP32.15■■■□□ 2.74
PTCH1-210ENST00000468211 LMOD3Q0VAK6 560 aa32.15■■■□□ 2.74
PTCH1-210ENST00000468211 BABAM1Q9NWV8 329 aa32.15■■■□□ 2.74
PTCH1-210ENST00000468211 GIGYF2Q6Y7W6 1299 aaKnown RBP32.14■■■□□ 2.74
PTCH1-210ENST00000468211 TRIM35Q9UPQ4 493 aa32.14■■■□□ 2.74
PTCH1-210ENST00000468211 ALDH1B1P30837 517 aa32.13■■■□□ 2.73
PTCH1-210ENST00000468211 FKBP4Q02790 459 aaKnown RBP eCLIP32.13■■■□□ 2.73
PTCH1-210ENST00000468211 ZNF277Q9NRM2 450 aaPredicted RBP32.13■■■□□ 2.73
PTCH1-210ENST00000468211 IBTKQ9P2D0 1353 aaPredicted RBP32.13■■■□□ 2.73
PTCH1-210ENST00000468211 NTSR2O95665 410 aa32.12■■■□□ 2.73
PTCH1-210ENST00000468211 KRT24Q2M2I5 525 aa32.12■■■□□ 2.73
PTCH1-210ENST00000468211 NECTIN2Q92692 538 aa32.12■■■□□ 2.73
PTCH1-210ENST00000468211 RUNDC1Q96C34 613 aa32.12■■■□□ 2.73
PTCH1-210ENST00000468211 ADAMTS8Q9UP79 889 aa32.12■■■□□ 2.73
PTCH1-210ENST00000468211 SNED1Q8TER0 1413 aa32.11■■■□□ 2.73
PTCH1-210ENST00000468211 ANKRD36CQ5JPF3 1778 aa32.11■■■□□ 2.73
PTCH1-210ENST00000468211 RIC1Q4ADV7 1423 aa32.1■■■□□ 2.73
PTCH1-210ENST00000468211 C3orf67Q6ZVT6 689 aa32.1■■■□□ 2.73
PTCH1-210ENST00000468211 CHL1O00533 1208 aa32.09■■■□□ 2.73
PTCH1-210ENST00000468211 WDR43Q15061 677 aaKnown RBP eCLIP32.09■■■□□ 2.73
PTCH1-210ENST00000468211 SLC51AQ86UW1 340 aa32.09■■■□□ 2.73
PTCH1-210ENST00000468211 KLRG1Q96E93 195 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms