RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ZIC5Q96T25 663 aa17.82■□□□□ 0.44
UBR4-210ENST00000466969 GJA3Q9Y6H8 435 aa17.82■□□□□ 0.44
UBR4-210ENST00000466969 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
UBR4-210ENST00000466969 NCAPD2Q15021 1401 aa17.81■□□□□ 0.44
UBR4-210ENST00000466969 COL15A1P39059 1388 aa17.8■□□□□ 0.44
UBR4-210ENST00000466969 ANKRD31Q8N7Z5 1873 aa17.8■□□□□ 0.44
UBR4-210ENST00000466969 TRPA1O75762 1119 aa17.8■□□□□ 0.44
UBR4-210ENST00000466969 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
UBR4-210ENST00000466969 ZNF408Q9H9D4 720 aa17.8■□□□□ 0.44
UBR4-210ENST00000466969 COL11A2P13942 1736 aaPredicted RBP17.8■□□□□ 0.44
UBR4-210ENST00000466969 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
UBR4-210ENST00000466969 SZT2Q5T011 3432 aa17.79■□□□□ 0.44
UBR4-210ENST00000466969 NPHP1O15259 732 aa17.79■□□□□ 0.44
UBR4-210ENST00000466969 EIF6P56537 245 aaKnown RBP17.79■□□□□ 0.44
UBR4-210ENST00000466969 JDP2Q8WYK2 163 aa17.79■□□□□ 0.44
UBR4-210ENST00000466969 MASTLQ96GX5 879 aa17.79■□□□□ 0.44
UBR4-210ENST00000466969 GGNBP2Q9H3C7 697 aa17.79■□□□□ 0.44
UBR4-210ENST00000466969 MKI67P46013 3256 aaKnown RBP17.78■□□□□ 0.44
UBR4-210ENST00000466969 IARSP41252 1262 aaKnown RBP17.78■□□□□ 0.44
UBR4-210ENST00000466969 EPS15P42566 896 aa17.78■□□□□ 0.44
UBR4-210ENST00000466969 RNF186Q9NXI6 227 aa17.78■□□□□ 0.44
UBR4-210ENST00000466969 TJP1Q07157 1748 aa17.78■□□□□ 0.44
UBR4-210ENST00000466969 SRGNP10124 158 aa17.77■□□□□ 0.44
UBR4-210ENST00000466969 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.44
UBR4-210ENST00000466969 DNAJC10Q8IXB1 793 aa17.76■□□□□ 0.43
UBR4-210ENST00000466969 RTKN2Q8IZC4 609 aa17.76■□□□□ 0.43
UBR4-210ENST00000466969 HDAC9Q9UKV0 1011 aa17.76■□□□□ 0.43
UBR4-210ENST00000466969 COLQQ9Y215 455 aaPredicted RBP17.76■□□□□ 0.43
UBR4-210ENST00000466969 SCNN1DP51172 638 aa17.75■□□□□ 0.43
UBR4-210ENST00000466969 HUNKP57058 714 aa17.75■□□□□ 0.43
UBR4-210ENST00000466969 C7orf43Q8WVR3 580 aa17.75■□□□□ 0.43
UBR4-210ENST00000466969 EYA1Q99502 592 aa17.75■□□□□ 0.43
UBR4-210ENST00000466969 PITPNM2Q9BZ72 1349 aa17.74■□□□□ 0.43
UBR4-210ENST00000466969 ARFGEF2Q9Y6D5 1785 aa17.74■□□□□ 0.43
UBR4-210ENST00000466969 FYB1O15117 783 aa17.74■□□□□ 0.43
UBR4-210ENST00000466969 SYNE4Q8N205 404 aa17.74■□□□□ 0.43
UBR4-210ENST00000466969 PUS7Q96PZ0 661 aaKnown RBP17.74■□□□□ 0.43
UBR4-210ENST00000466969 GLIS2Q9BZE0 524 aaPredicted RBP17.74■□□□□ 0.43
UBR4-210ENST00000466969 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
UBR4-210ENST00000466969 ST5P78524 1137 aa17.73■□□□□ 0.43
UBR4-210ENST00000466969 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
UBR4-210ENST00000466969 TBC1D9BQ66K14 1250 aa17.73■□□□□ 0.43
UBR4-210ENST00000466969 CNBD1Q8NA66 436 aa17.72■□□□□ 0.43
UBR4-210ENST00000466969 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
UBR4-210ENST00000466969 ZBTB1Q9Y2K1 713 aa17.72■□□□□ 0.43
UBR4-210ENST00000466969 AKAP11Q9UKA4 1901 aa17.72■□□□□ 0.43
UBR4-210ENST00000466969 CYP19A1P11511 503 aaPredicted RBP17.71■□□□□ 0.43
UBR4-210ENST00000466969 RGMBQ6NW40 437 aa17.71■□□□□ 0.43
UBR4-210ENST00000466969 CCDC102AQ96A19 550 aa17.71■□□□□ 0.43
UBR4-210ENST00000466969 ADARB2Q9NS39 739 aaKnown RBP17.71■□□□□ 0.43
UBR4-210ENST00000466969 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
UBR4-210ENST00000466969 ST20-MTHFSA0A0A6YYL1 179 aa17.7■□□□□ 0.42
UBR4-210ENST00000466969 MTHFSP49914 203 aa17.7■□□□□ 0.42
UBR4-210ENST00000466969 MNX1P50219 401 aaPredicted RBP17.7■□□□□ 0.42
UBR4-210ENST00000466969 FAM155AB1AL88 458 aaPredicted RBP17.69■□□□□ 0.42
UBR4-210ENST00000466969 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
UBR4-210ENST00000466969 A0A087WZG4 1122 aa17.68■□□□□ 0.42
UBR4-210ENST00000466969 PLEKHO1Q53GL0 409 aaPredicted RBP17.68■□□□□ 0.42
UBR4-210ENST00000466969 FBXO46Q6PJ61 603 aaPredicted RBP17.68■□□□□ 0.42
UBR4-210ENST00000466969 WASHC2AQ641Q2 1341 aa17.68■□□□□ 0.42
UBR4-210ENST00000466969 BCORQ6W2J9 1755 aa17.67■□□□□ 0.42
UBR4-210ENST00000466969 NPR1P16066 1061 aa17.67■□□□□ 0.42
UBR4-210ENST00000466969 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
UBR4-210ENST00000466969 ZNF530Q6P9A1 599 aaPredicted RBP17.67■□□□□ 0.42
UBR4-210ENST00000466969 OLFM4Q6UX06 510 aa17.67■□□□□ 0.42
UBR4-210ENST00000466969 CDC37L1Q7L3B6 337 aa17.67■□□□□ 0.42
UBR4-210ENST00000466969 ZNF157P51786 506 aaPredicted RBP17.66■□□□□ 0.42
UBR4-210ENST00000466969 L3MBTL2Q969R5 705 aa17.66■□□□□ 0.42
UBR4-210ENST00000466969 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
UBR4-210ENST00000466969 SCN11AQ9UI33 1791 aa17.66■□□□□ 0.42
UBR4-210ENST00000466969 COL6A3P12111 3177 aa17.65■□□□□ 0.42
UBR4-210ENST00000466969 C1orf141Q5JVX7 400 aa17.65■□□□□ 0.42
UBR4-210ENST00000466969 CSRNP1Q96S65 589 aa17.65■□□□□ 0.42
UBR4-210ENST00000466969 REM2Q8IYK8 340 aaPredicted RBP17.64■□□□□ 0.41
UBR4-210ENST00000466969 PSMD1Q99460 953 aa17.64■□□□□ 0.41
UBR4-210ENST00000466969 GPRC5DQ9NZD1 345 aa17.64■□□□□ 0.41
UBR4-210ENST00000466969 ZC3H15Q8WU90 426 aaKnown RBP17.63■□□□□ 0.41
UBR4-210ENST00000466969 ZNF296Q8WUU4 475 aaPredicted RBP17.63■□□□□ 0.41
UBR4-210ENST00000466969 PGAP2Q9UHJ9 254 aa17.63■□□□□ 0.41
UBR4-210ENST00000466969 ANKRD26Q9UPS8 1709 aa17.63■□□□□ 0.41
UBR4-210ENST00000466969 AMOTQ4VCS5 1084 aa17.62■□□□□ 0.41
UBR4-210ENST00000466969 LARGE2Q8N3Y3 721 aa17.62■□□□□ 0.41
UBR4-210ENST00000466969 C2orf69Q8N8R5 385 aa17.62■□□□□ 0.41
UBR4-210ENST00000466969 POTEFA5A3E0 1075 aa17.61■□□□□ 0.41
UBR4-210ENST00000466969 INTS3Q68E01 1043 aaKnown RBP17.61■□□□□ 0.41
UBR4-210ENST00000466969 EIF5P55010 431 aaKnown RBP17.6■□□□□ 0.41
UBR4-210ENST00000466969 CARD11Q9BXL7 1154 aa17.6■□□□□ 0.41
UBR4-210ENST00000466969 GBA2Q9HCG7 927 aaPredicted RBP17.6■□□□□ 0.41
UBR4-210ENST00000466969 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
UBR4-210ENST00000466969 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
UBR4-210ENST00000466969 ZNF330Q9Y3S2 320 aaPredicted RBP17.59■□□□□ 0.41
UBR4-210ENST00000466969 SLC10A3P09131 477 aa17.58■□□□□ 0.4
UBR4-210ENST00000466969 USP48Q86UV5 1035 aa17.58■□□□□ 0.4
UBR4-210ENST00000466969 NIM1KQ8IY84 436 aa17.58■□□□□ 0.4
UBR4-210ENST00000466969 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
UBR4-210ENST00000466969 COL4A5P29400 1685 aa17.57■□□□□ 0.4
UBR4-210ENST00000466969 TBC1D8O95759 1140 aa17.56■□□□□ 0.4
UBR4-210ENST00000466969 STARD3NLO95772 234 aa17.56■□□□□ 0.4
UBR4-210ENST00000466969 NBPF5PQ86XG9 351 aaPredicted RBP17.56■□□□□ 0.4
UBR4-210ENST00000466969 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms