RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 MTX1Q13505 466 aa16.68■□□□□ 0.26
UBE4B-206ENST00000466379 KIF2CQ99661 725 aa16.68■□□□□ 0.26
UBE4B-206ENST00000466379 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
UBE4B-206ENST00000466379 ARFGEF2Q9Y6D5 1785 aa16.68■□□□□ 0.26
UBE4B-206ENST00000466379 UTYO14607 1347 aa16.68■□□□□ 0.26
UBE4B-206ENST00000466379 ATP5J2-PTCD1G3V325 749 aa16.67■□□□□ 0.26
UBE4B-206ENST00000466379 GCKRQ14397 625 aa16.67■□□□□ 0.26
UBE4B-206ENST00000466379 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
UBE4B-206ENST00000466379 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
UBE4B-206ENST00000466379 AFDNP55196 1824 aaKnown RBP16.67■□□□□ 0.26
UBE4B-206ENST00000466379 PHLPP1O60346 1717 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 RILPL2Q969X0 211 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 STAP2Q9UGK3 403 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 DISP2A7MBM2 1401 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 PIP4K2BP78356 416 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 CASC1Q6TDU7 716 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 TTLL7Q6ZT98 887 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 UNC5CLQ8IV45 518 aa16.66■□□□□ 0.26
UBE4B-206ENST00000466379 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
UBE4B-206ENST00000466379 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
UBE4B-206ENST00000466379 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
UBE4B-206ENST00000466379 PIGBQ92521 554 aa16.65■□□□□ 0.26
UBE4B-206ENST00000466379 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
UBE4B-206ENST00000466379 PLBD2Q8NHP8 589 aa16.65■□□□□ 0.26
UBE4B-206ENST00000466379 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
UBE4B-206ENST00000466379 NUTM2BA6NNL0 878 aaPredicted RBP16.64■□□□□ 0.25
UBE4B-206ENST00000466379 NUTM2EB1AL46 878 aaPredicted RBP16.64■□□□□ 0.25
UBE4B-206ENST00000466379 HSP90AB4PQ58FF6 505 aa16.64■□□□□ 0.25
UBE4B-206ENST00000466379 NUTM2AQ8IVF1 878 aaPredicted RBP16.64■□□□□ 0.25
UBE4B-206ENST00000466379 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
UBE4B-206ENST00000466379 PLCH1Q4KWH8 1693 aa16.64■□□□□ 0.25
UBE4B-206ENST00000466379 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
UBE4B-206ENST00000466379 KLHDC4Q8TBB5 520 aa16.63■□□□□ 0.25
UBE4B-206ENST00000466379 NFKBIBQ15653 356 aa16.63■□□□□ 0.25
UBE4B-206ENST00000466379 UBE3BQ7Z3V4 1068 aa16.63■□□□□ 0.25
UBE4B-206ENST00000466379 SIL1Q9H173 461 aa16.63■□□□□ 0.25
UBE4B-206ENST00000466379 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.63■□□□□ 0.25
UBE4B-206ENST00000466379 ERBB4Q15303 1308 aa16.63■□□□□ 0.25
UBE4B-206ENST00000466379 ITGB4P16144 1822 aa16.62■□□□□ 0.25
UBE4B-206ENST00000466379 PI4K2BQ8TCG2 481 aa16.62■□□□□ 0.25
UBE4B-206ENST00000466379 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
UBE4B-206ENST00000466379 CD2BP2O95400 341 aaKnown RBP16.62■□□□□ 0.25
UBE4B-206ENST00000466379 ANTXR1Q9H6X2 564 aa16.62■□□□□ 0.25
UBE4B-206ENST00000466379 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
UBE4B-206ENST00000466379 AOX1Q06278 1338 aa16.62■□□□□ 0.25
UBE4B-206ENST00000466379 A0A087WZG4 1122 aa16.61■□□□□ 0.25
UBE4B-206ENST00000466379 ERC2O15083 957 aa16.61■□□□□ 0.25
UBE4B-206ENST00000466379 ZNF330Q9Y3S2 320 aaPredicted RBP16.61■□□□□ 0.25
UBE4B-206ENST00000466379 NUP188Q5SRE5 1749 aa16.61■□□□□ 0.25
UBE4B-206ENST00000466379 EXOC5O00471 708 aa16.61■□□□□ 0.25
UBE4B-206ENST00000466379 DNAJC10Q8IXB1 793 aa16.61■□□□□ 0.25
UBE4B-206ENST00000466379 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
UBE4B-206ENST00000466379 WNK3Q9BYP7 1800 aa16.6■□□□□ 0.25
UBE4B-206ENST00000466379 SASH1O94885 1247 aa16.6■□□□□ 0.25
UBE4B-206ENST00000466379 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
UBE4B-206ENST00000466379 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
UBE4B-206ENST00000466379 CHMLP26374 656 aa16.59■□□□□ 0.25
UBE4B-206ENST00000466379 KLHL34Q8N239 644 aa16.59■□□□□ 0.25
UBE4B-206ENST00000466379 SNX21Q969T3 373 aa16.59■□□□□ 0.25
UBE4B-206ENST00000466379 ESYT1Q9BSJ8 1104 aa16.59■□□□□ 0.25
UBE4B-206ENST00000466379 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
UBE4B-206ENST00000466379 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.25
UBE4B-206ENST00000466379 REC8O95072 547 aa16.58■□□□□ 0.25
UBE4B-206ENST00000466379 AACSQ86V21 672 aa16.58■□□□□ 0.25
UBE4B-206ENST00000466379 ERC1Q8IUD2 1116 aa16.58■□□□□ 0.25
UBE4B-206ENST00000466379 NRAPQ86VF7 1730 aa16.58■□□□□ 0.25
UBE4B-206ENST00000466379 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
UBE4B-206ENST00000466379 CASP7P55210 303 aa16.58■□□□□ 0.24
UBE4B-206ENST00000466379 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
UBE4B-206ENST00000466379 HOMEZQ8IX15 550 aa16.57■□□□□ 0.24
UBE4B-206ENST00000466379 IL25Q9H293 177 aa16.57■□□□□ 0.24
UBE4B-206ENST00000466379 BCL9O00512 1426 aa16.57■□□□□ 0.24
UBE4B-206ENST00000466379 SPATA31A1Q5TZJ5 1347 aa16.57■□□□□ 0.24
UBE4B-206ENST00000466379 IFIT2P09913 472 aaKnown RBP16.57■□□□□ 0.24
UBE4B-206ENST00000466379 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
UBE4B-206ENST00000466379 TJP1Q07157 1748 aa16.56■□□□□ 0.24
UBE4B-206ENST00000466379 A0A0G2JS52 829 aa16.56■□□□□ 0.24
UBE4B-206ENST00000466379 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
UBE4B-206ENST00000466379 SLC4A9Q96Q91 983 aa16.56■□□□□ 0.24
UBE4B-206ENST00000466379 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
UBE4B-206ENST00000466379 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
UBE4B-206ENST00000466379 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
UBE4B-206ENST00000466379 RFX5P48382 616 aaPredicted RBP16.56■□□□□ 0.24
UBE4B-206ENST00000466379 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
UBE4B-206ENST00000466379 CWC25Q9NXE8 425 aaPredicted RBP16.56■□□□□ 0.24
UBE4B-206ENST00000466379 DOT1LQ8TEK3 1739 aa16.55■□□□□ 0.24
UBE4B-206ENST00000466379 TTC41PQ6P2S7 1318 aa16.55■□□□□ 0.24
UBE4B-206ENST00000466379 TOM1O60784 492 aa16.55■□□□□ 0.24
UBE4B-206ENST00000466379 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
UBE4B-206ENST00000466379 CCDC9Q9Y3X0 531 aaKnown RBP16.55■□□□□ 0.24
UBE4B-206ENST00000466379 H7C1W4 665 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
UBE4B-206ENST00000466379 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 CHMP3Q9Y3E7 222 aa16.54■□□□□ 0.24
UBE4B-206ENST00000466379 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
UBE4B-206ENST00000466379 RABEP1Q15276 862 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms