RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 NUP160Q12769 1436 aa10.31□□□□□ -0.76
SPTA1-203ENST00000465741 ATAD2Q6PL18 1390 aa10.3□□□□□ -0.76
SPTA1-203ENST00000465741 CDK2AP1O14519 115 aa10.3□□□□□ -0.76
SPTA1-203ENST00000465741 FOXK2Q01167 660 aa10.3□□□□□ -0.76
SPTA1-203ENST00000465741 TMCO4Q5TGY1 634 aa10.3□□□□□ -0.76
SPTA1-203ENST00000465741 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
SPTA1-203ENST00000465741 COL26A1Q96A83 441 aa10.3□□□□□ -0.76
SPTA1-203ENST00000465741 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.3□□□□□ -0.76
SPTA1-203ENST00000465741 HRH3Q9Y5N1 445 aa10.3□□□□□ -0.76
SPTA1-203ENST00000465741 PBRM1Q86U86 1689 aa10.3□□□□□ -0.76
SPTA1-203ENST00000465741 GPC1P35052 558 aa10.29□□□□□ -0.76
SPTA1-203ENST00000465741 PSMA6P60900 246 aaKnown RBP10.29□□□□□ -0.76
SPTA1-203ENST00000465741 SLC9A9Q8IVB4 645 aa10.29□□□□□ -0.76
SPTA1-203ENST00000465741 STAG2Q8N3U4 1231 aa10.29□□□□□ -0.76
SPTA1-203ENST00000465741 ZNF395Q9H8N7 513 aaPredicted RBP10.29□□□□□ -0.76
SPTA1-203ENST00000465741 ARHGAP35Q9NRY4 1499 aa10.29□□□□□ -0.76
SPTA1-203ENST00000465741 ARHGEF11O15085 1522 aa10.28□□□□□ -0.76
SPTA1-203ENST00000465741 PPP1R12BO60237 982 aaPredicted RBP10.28□□□□□ -0.76
SPTA1-203ENST00000465741 CENPCQ03188 943 aa10.28□□□□□ -0.76
SPTA1-203ENST00000465741 FKBP5Q13451 457 aaPredicted RBP10.28□□□□□ -0.76
SPTA1-203ENST00000465741 SCARF1Q14162 830 aa10.28□□□□□ -0.76
SPTA1-203ENST00000465741 LINC00528Q8N1L1 170 aa10.28□□□□□ -0.76
SPTA1-203ENST00000465741 ZSCAN10Q96SZ4 725 aaPredicted RBP10.27□□□□□ -0.77
SPTA1-203ENST00000465741 MKNK1Q9BUB5 465 aa10.27□□□□□ -0.77
SPTA1-203ENST00000465741 FHDC1Q9C0D6 1143 aaPredicted RBP10.27□□□□□ -0.77
SPTA1-203ENST00000465741 FHOD3Q2V2M9 1422 aa10.26□□□□□ -0.77
SPTA1-203ENST00000465741 ARAP1Q96P48 1450 aa10.26□□□□□ -0.77
SPTA1-203ENST00000465741 SUZ12Q15022 739 aaKnown RBP10.26□□□□□ -0.77
SPTA1-203ENST00000465741 SND1Q7KZF4 910 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPTA1-203ENST00000465741 EGFL7Q9UHF1 273 aa10.26□□□□□ -0.77
SPTA1-203ENST00000465741 SPINT1O43278 529 aa10.25□□□□□ -0.77
SPTA1-203ENST00000465741 C21orf2O43822 256 aa10.25□□□□□ -0.77
SPTA1-203ENST00000465741 SLC27A3Q5K4L6 730 aa10.25□□□□□ -0.77
SPTA1-203ENST00000465741 TMEM214Q6NUQ4 689 aaKnown RBP10.25□□□□□ -0.77
SPTA1-203ENST00000465741 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
SPTA1-203ENST00000465741 CEP170Q5SW79 1584 aa10.24□□□□□ -0.77
SPTA1-203ENST00000465741 BMP2P12643 396 aa10.24□□□□□ -0.77
SPTA1-203ENST00000465741 SERPINB4P48594 390 aa10.24□□□□□ -0.77
SPTA1-203ENST00000465741 RNF144AP50876 292 aaPredicted RBP10.24□□□□□ -0.77
SPTA1-203ENST00000465741 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
SPTA1-203ENST00000465741 TBCELQ5QJ74 424 aa10.24□□□□□ -0.77
SPTA1-203ENST00000465741 C2orf49Q9BVC5 232 aaPredicted RBP10.24□□□□□ -0.77
SPTA1-203ENST00000465741 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
SPTA1-203ENST00000465741 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
SPTA1-203ENST00000465741 PRG4Q92954 1404 aaPredicted RBP10.24□□□□□ -0.77
SPTA1-203ENST00000465741 PPFIA3O75145 1194 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 ABL1P00519 1130 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 KCNMA1Q12791 1236 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 TEAD4Q15561 434 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 C6orf118Q5T5N4 469 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 RHBDD1Q8TEB9 315 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
SPTA1-203ENST00000465741 CABP1Q9NZU7 370 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 CARMIL2Q6F5E8 1435 aa10.23□□□□□ -0.77
SPTA1-203ENST00000465741 SERTM1A2A2V5 107 aa10.22□□□□□ -0.77
SPTA1-203ENST00000465741 SOWAHDA6NJG2 315 aa10.22□□□□□ -0.77
SPTA1-203ENST00000465741 SCNN1AP37088 669 aa10.22□□□□□ -0.77
SPTA1-203ENST00000465741 INSM2Q96T92 566 aaPredicted RBP10.22□□□□□ -0.77
SPTA1-203ENST00000465741 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
SPTA1-203ENST00000465741 HIRAP54198 1017 aaPredicted RBP10.21□□□□□ -0.77
SPTA1-203ENST00000465741 KRT76Q01546 638 aa10.21□□□□□ -0.77
SPTA1-203ENST00000465741 SF3B2Q13435 895 aaKnown RBP10.21□□□□□ -0.77
SPTA1-203ENST00000465741 GTF3C2Q8WUA4 911 aaPredicted RBP10.21□□□□□ -0.77
SPTA1-203ENST00000465741 GRIP2Q9C0E4 1043 aa10.21□□□□□ -0.77
SPTA1-203ENST00000465741 ZNF232Q9UNY5 417 aa10.21□□□□□ -0.77
SPTA1-203ENST00000465741 USP3Q9Y6I4 520 aa10.21□□□□□ -0.77
SPTA1-203ENST00000465741 UGGT2Q9NYU1 1516 aa10.21□□□□□ -0.78
SPTA1-203ENST00000465741 MAN1A2O60476 641 aa10.2□□□□□ -0.78
SPTA1-203ENST00000465741 NOS2P35228 1153 aa10.2□□□□□ -0.78
SPTA1-203ENST00000465741 CCDC27Q2M243 656 aa10.2□□□□□ -0.78
SPTA1-203ENST00000465741 POTEAQ6S8J7 498 aa10.2□□□□□ -0.78
SPTA1-203ENST00000465741 SEPT3Q9UH03 358 aa10.2□□□□□ -0.78
SPTA1-203ENST00000465741 DISP1Q96F81 1524 aa10.19□□□□□ -0.78
SPTA1-203ENST00000465741 PTPRGP23470 1445 aa10.19□□□□□ -0.78
SPTA1-203ENST00000465741 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
SPTA1-203ENST00000465741 NAA30Q147X3 362 aaPredicted RBP10.19□□□□□ -0.78
SPTA1-203ENST00000465741 C16orf46Q6P387 395 aa10.19□□□□□ -0.78
SPTA1-203ENST00000465741 GLYCTKQ8IVS8 523 aa10.19□□□□□ -0.78
SPTA1-203ENST00000465741 HELQQ8TDG4 1101 aa10.19□□□□□ -0.78
SPTA1-203ENST00000465741 DNMT3LQ9UJW3 386 aa10.19□□□□□ -0.78
SPTA1-203ENST00000465741 FMN1Q68DA7 1419 aa10.18□□□□□ -0.78
SPTA1-203ENST00000465741 H3BRB1 525 aa10.18□□□□□ -0.78
SPTA1-203ENST00000465741 EML1O00423 815 aa10.18□□□□□ -0.78
SPTA1-203ENST00000465741 FOXD4L5Q5VV16 416 aaPredicted RBP10.18□□□□□ -0.78
SPTA1-203ENST00000465741 GPR161Q8N6U8 529 aaKnown RBP10.18□□□□□ -0.78
SPTA1-203ENST00000465741 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
SPTA1-203ENST00000465741 TUT1Q9H6E5 874 aaKnown RBP10.18□□□□□ -0.78
SPTA1-203ENST00000465741 EFCAB5A4FU69 1503 aa10.17□□□□□ -0.78
SPTA1-203ENST00000465741 SOS2Q07890 1332 aaPredicted RBP10.17□□□□□ -0.78
SPTA1-203ENST00000465741 SPATA31C2B4DYI2 1134 aa10.17□□□□□ -0.78
SPTA1-203ENST00000465741 ICMTO60725 284 aa10.17□□□□□ -0.78
SPTA1-203ENST00000465741 CTSOP43234 321 aaPredicted RBP10.17□□□□□ -0.78
SPTA1-203ENST00000465741 FKBP4Q02790 459 aaKnown RBP eCLIP10.17□□□□□ -0.78
SPTA1-203ENST00000465741 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
SPTA1-203ENST00000465741 CAPN12Q6ZSI9 719 aa10.17□□□□□ -0.78
SPTA1-203ENST00000465741 ZDHHC1Q8WTX9 485 aa10.17□□□□□ -0.78
SPTA1-203ENST00000465741 BIN2Q9UBW5 565 aaPredicted RBP10.17□□□□□ -0.78
SPTA1-203ENST00000465741 NBPF1Q3BBV0 1214 aa10.16□□□□□ -0.78
SPTA1-203ENST00000465741 LYSMD3Q7Z3D4 306 aa10.16□□□□□ -0.78
SPTA1-203ENST00000465741 ZNF295-AS1Q8N0V1 137 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms