RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 AIDAQ96BJ3 306 aa18.18■□□□□ 0.5
HDAC6-215ENST00000465457 TAOK3Q9H2K8 898 aa18.18■□□□□ 0.5
HDAC6-215ENST00000465457 WBP1LQ9NX94 342 aa18.18■□□□□ 0.5
HDAC6-215ENST00000465457 THSD7BQ9C0I4 1608 aa18.18■□□□□ 0.5
HDAC6-215ENST00000465457 NEFLP07196 543 aa18.17■□□□□ 0.5
HDAC6-215ENST00000465457 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
HDAC6-215ENST00000465457 PRR5LQ6MZQ0 368 aa18.17■□□□□ 0.5
HDAC6-215ENST00000465457 ITGBL1O95965 494 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-215ENST00000465457 TAF1DQ9H5J8 278 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-215ENST00000465457 ZNF541Q9H0D2 1346 aa18.16■□□□□ 0.5
HDAC6-215ENST00000465457 LTBP3Q9NS15 1303 aa18.16■□□□□ 0.5
HDAC6-215ENST00000465457 LDHDQ86WU2 507 aa18.15■□□□□ 0.5
HDAC6-215ENST00000465457 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
HDAC6-215ENST00000465457 TMEM88BA6NKF7 163 aa18.14■□□□□ 0.49
HDAC6-215ENST00000465457 NGEFQ8N5V2 710 aa18.14■□□□□ 0.49
HDAC6-215ENST00000465457 SIPA1L3O60292 1781 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-215ENST00000465457 EIF5P55010 431 aaKnown RBP18.13■□□□□ 0.49
HDAC6-215ENST00000465457 EAPPQ56P03 285 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-215ENST00000465457 AKAP4Q5JQC9 854 aa18.13■□□□□ 0.49
HDAC6-215ENST00000465457 PRPF40BQ6NWY9 871 aaKnown RBP18.13■□□□□ 0.49
HDAC6-215ENST00000465457 L3MBTL3Q96JM7 780 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-215ENST00000465457 BRIP1Q9BX63 1249 aa18.13■□□□□ 0.49
HDAC6-215ENST00000465457 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
HDAC6-215ENST00000465457 RNMTO43148 476 aaKnown RBP18.12■□□□□ 0.49
HDAC6-215ENST00000465457 IL13P35225 146 aa18.11■□□□□ 0.49
HDAC6-215ENST00000465457 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
HDAC6-215ENST00000465457 TNRC18O15417 2968 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-215ENST00000465457 IQCA1LA6NCM1 817 aa18.1■□□□□ 0.49
HDAC6-215ENST00000465457 PDE6BP35913 854 aa18.1■□□□□ 0.49
HDAC6-215ENST00000465457 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-215ENST00000465457 TBC1D2BQ9UPU7 963 aa18.1■□□□□ 0.49
HDAC6-215ENST00000465457 NUDCQ9Y266 331 aa18.1■□□□□ 0.49
HDAC6-215ENST00000465457 ZNF330Q9Y3S2 320 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-215ENST00000465457 RNF123Q5XPI4 1314 aa18.09■□□□□ 0.49
HDAC6-215ENST00000465457 RASSF10A6NK89 507 aa18.09■□□□□ 0.49
HDAC6-215ENST00000465457 COL4A5P29400 1685 aa18.09■□□□□ 0.49
HDAC6-215ENST00000465457 WDR33Q9C0J8 1336 aaKnown RBP18.08■□□□□ 0.49
HDAC6-215ENST00000465457 SRGNP10124 158 aa18.08■□□□□ 0.48
HDAC6-215ENST00000465457 FMR1Q06787 632 aaKnown RBP eCLIP18.08■□□□□ 0.48
HDAC6-215ENST00000465457 ADAMTS8Q9UP79 889 aa18.08■□□□□ 0.48
HDAC6-215ENST00000465457 TRPM7Q96QT4 1865 aa18.07■□□□□ 0.48
HDAC6-215ENST00000465457 CCDC85CA6NKD9 419 aa18.07■□□□□ 0.48
HDAC6-215ENST00000465457 HMOX1P09601 288 aa18.07■□□□□ 0.48
HDAC6-215ENST00000465457 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
HDAC6-215ENST00000465457 CNBD1Q8NA66 436 aa18.07■□□□□ 0.48
HDAC6-215ENST00000465457 ZNF277Q9NRM2 450 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-215ENST00000465457 CASP8AP2Q9UKL3 1982 aa18.07■□□□□ 0.48
HDAC6-215ENST00000465457 EPHX2P34913 555 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 MLLT1Q03111 559 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-215ENST00000465457 DEFB115Q30KQ5 88 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 STYK1Q6J9G0 422 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 C7orf43Q8WVR3 580 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 TSKSQ9UJT2 592 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 CLEC11AQ9Y240 323 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 PDE4DIPQ5VU43 2346 aa18.06■□□□□ 0.48
HDAC6-215ENST00000465457 MTHFSDQ2M296 383 aaKnown RBP18.05■□□□□ 0.48
HDAC6-215ENST00000465457 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
HDAC6-215ENST00000465457 ZNF496Q96IT1 587 aaPredicted RBP18.05■□□□□ 0.48
HDAC6-215ENST00000465457 HACL1Q9UJ83 578 aa18.05■□□□□ 0.48
HDAC6-215ENST00000465457 CAMTA2O94983 1202 aa18.04■□□□□ 0.48
HDAC6-215ENST00000465457 CNTROBQ8N137 903 aa18.04■□□□□ 0.48
HDAC6-215ENST00000465457 MASTLQ96GX5 879 aa18.04■□□□□ 0.48
HDAC6-215ENST00000465457 ABT1Q9ULW3 272 aaKnown RBP18.04■□□□□ 0.48
HDAC6-215ENST00000465457 PDZRN3Q9UPQ7 1066 aa18.04■□□□□ 0.48
HDAC6-215ENST00000465457 SUPT16HQ9Y5B9 1047 aaKnown RBP18.03■□□□□ 0.48
HDAC6-215ENST00000465457 HEG1Q9ULI3 1381 aa18.03■□□□□ 0.48
HDAC6-215ENST00000465457 A0A087WZG4 1122 aa18.02■□□□□ 0.48
HDAC6-215ENST00000465457 PIP4K2AP48426 406 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-215ENST00000465457 GRM1Q13255 1194 aa18.02■□□□□ 0.48
HDAC6-215ENST00000465457 CCDC93Q567U6 631 aa18.02■□□□□ 0.48
HDAC6-215ENST00000465457 SNED1Q8TER0 1413 aa18.02■□□□□ 0.48
HDAC6-215ENST00000465457 NPHP1O15259 732 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 STARD3NLO95772 234 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 A1BGP04217 495 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 RGS19P49795 217 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 ST5P78524 1137 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 MAP2K1Q02750 393 aaPredicted RBP18.01■□□□□ 0.47
HDAC6-215ENST00000465457 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
HDAC6-215ENST00000465457 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
HDAC6-215ENST00000465457 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 SLC51AQ86UW1 340 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
HDAC6-215ENST00000465457 CYP4F22Q6NT55 531 aa18■□□□□ 0.47
HDAC6-215ENST00000465457 CAPNS2Q96L46 248 aa18■□□□□ 0.47
HDAC6-215ENST00000465457 IL6STP40189 918 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-215ENST00000465457 PAXIP1Q6ZW49 1069 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-215ENST00000465457 TTC5Q8N0Z6 440 aa17.99■□□□□ 0.47
HDAC6-215ENST00000465457 DDX21Q9NR30 783 aaKnown RBP eCLIP17.99■□□□□ 0.47
HDAC6-215ENST00000465457 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-215ENST00000465457 FZD9O00144 591 aa17.98■□□□□ 0.47
HDAC6-215ENST00000465457 TRAF5O00463 557 aa17.98■□□□□ 0.47
HDAC6-215ENST00000465457 PCDH10Q9P2E7 1040 aa17.98■□□□□ 0.47
HDAC6-215ENST00000465457 KCNQ3O43525 872 aa17.97■□□□□ 0.47
HDAC6-215ENST00000465457 AOC2O75106 756 aa17.97■□□□□ 0.47
HDAC6-215ENST00000465457 IARSP41252 1262 aaKnown RBP17.97■□□□□ 0.47
HDAC6-215ENST00000465457 ZNF790Q6PG37 636 aa17.97■□□□□ 0.47
HDAC6-215ENST00000465457 PNMA8AQ86V59 439 aaPredicted RBP17.97■□□□□ 0.47
HDAC6-215ENST00000465457 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
HDAC6-215ENST00000465457 DZIP3Q86Y13 1208 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms