RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-204ENST00000464812 C20orf194Q5TEA3 1177 aa11.5□□□□□ -0.57
NUDCD3-204ENST00000464812 SPON1Q9HCB6 807 aa11.5□□□□□ -0.57
NUDCD3-204ENST00000464812 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
NUDCD3-204ENST00000464812 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-204ENST00000464812 GNPATO15228 680 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 PHF14O94880 888 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 MYL6BP14649 208 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 RC3H1Q5TC82 1133 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 POTEHQ6S545 545 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 ERBB4Q15303 1308 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 KIF16BQ96L93 1317 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 ADCY9O60503 1353 aa11.49□□□□□ -0.57
NUDCD3-204ENST00000464812 RPS6KA4O75676 772 aa11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 RLBP1P12271 317 aa11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 SSFA2P28290 1259 aa11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 FLIIQ13045 1269 aa11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 FRAT1Q92837 279 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 BCL2L12Q9HB09 334 aa11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 CCDC87Q9NVE4 849 aa11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 SRP68Q9UHB9 627 aaKnown RBP11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 PXDNLA1KZ92 1463 aa11.48□□□□□ -0.57
NUDCD3-204ENST00000464812 ABCC4O15439 1325 aa11.47□□□□□ -0.57
NUDCD3-204ENST00000464812 STARD3NLO95772 234 aa11.47□□□□□ -0.57
NUDCD3-204ENST00000464812 TRIM27P14373 513 aa11.47□□□□□ -0.57
NUDCD3-204ENST00000464812 IRX6P78412 446 aaPredicted RBP11.47□□□□□ -0.57
NUDCD3-204ENST00000464812 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
NUDCD3-204ENST00000464812 AK7Q96M32 723 aa11.47□□□□□ -0.57
NUDCD3-204ENST00000464812 TEX13AQ9BXU3 409 aaPredicted RBP11.47□□□□□ -0.57
NUDCD3-204ENST00000464812 COL15A1P39059 1388 aa11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 F6X3S4 739 aa11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 GYS1P13807 737 aa11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 TTLL7Q6ZT98 887 aa11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 XAGE3Q8WTP9 111 aa11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 FHDC1Q9C0D6 1143 aaPredicted RBP11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 HYPKQ9NX55 129 aa11.46□□□□□ -0.57
NUDCD3-204ENST00000464812 PTPRCP08575 1304 aa11.45□□□□□ -0.58
NUDCD3-204ENST00000464812 KIF13BQ9NQT8 1826 aa11.45□□□□□ -0.58
NUDCD3-204ENST00000464812 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
NUDCD3-204ENST00000464812 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
NUDCD3-204ENST00000464812 PANK1Q8TE04 598 aa11.45□□□□□ -0.58
NUDCD3-204ENST00000464812 CLUAP1Q96AJ1 413 aa11.45□□□□□ -0.58
NUDCD3-204ENST00000464812 USP42Q9H9J4 1324 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 EIF5P55010 431 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 DDR1Q08345 913 aa11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 FKBP8Q14318 412 aa11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 COPS6Q7L5N1 327 aa11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 ARXQ96QS3 562 aa11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 SYT17Q9BSW7 474 aa11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 LAMB2P55268 1798 aa11.44□□□□□ -0.58
NUDCD3-204ENST00000464812 IL6STP40189 918 aaPredicted RBP11.43□□□□□ -0.58
NUDCD3-204ENST00000464812 TMEM57Q8N5G2 664 aa11.43□□□□□ -0.58
NUDCD3-204ENST00000464812 ARHGAP45Q92619 1136 aa11.43□□□□□ -0.58
NUDCD3-204ENST00000464812 RTCBQ9Y3I0 505 aaKnown RBP11.43□□□□□ -0.58
NUDCD3-204ENST00000464812 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
NUDCD3-204ENST00000464812 ATP10DQ9P241 1426 aa11.43□□□□□ -0.58
NUDCD3-204ENST00000464812 PI4KAP2A4QPH2 592 aa11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 DZIP1LQ8IYY4 767 aaKnown RBP11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 PI4KAP1Q8N8J0 262 aa11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 CRBNQ96SW2 442 aa11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 CHMP4AQ9BY43 222 aa11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 ZBTB3Q9H5J0 574 aa11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 MAP3K2Q9Y2U5 619 aa11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 DDX60Q8IY21 1712 aaKnown RBP11.42□□□□□ -0.58
NUDCD3-204ENST00000464812 IPO8O15397 1037 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 TM4SF1P30408 202 aa11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 KSR2Q6VAB6 950 aa11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 API5Q9BZZ5 524 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 COG6Q9Y2V7 657 aa11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 MYH3P11055 1940 aa11.41□□□□□ -0.58
NUDCD3-204ENST00000464812 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 CAMTA2O94983 1202 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 MMP10P09238 476 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 PDE3AQ14432 1141 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 HLFQ16534 295 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 USPL1Q5W0Q7 1092 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 DZIP3Q86Y13 1208 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 DNAAF4Q8WXU2 420 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 TBC1D2BQ9UPU7 963 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 C10orf71Q711Q0 1435 aa11.4□□□□□ -0.58
NUDCD3-204ENST00000464812 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.59
NUDCD3-204ENST00000464812 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
NUDCD3-204ENST00000464812 IGKV5-2P06315 115 aa11.39□□□□□ -0.59
NUDCD3-204ENST00000464812 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
NUDCD3-204ENST00000464812 SLC4A10Q6U841 1118 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms