RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 TIAM2Q8IVF5 1701 aa27.19■■□□□ 1.94
CD58-204ENST00000464088 ZNF853P0CG23 659 aa27.18■■□□□ 1.94
CD58-204ENST00000464088 SOS1Q07889 1333 aaPredicted RBP27.17■■□□□ 1.94
CD58-204ENST00000464088 DNAJC10Q8IXB1 793 aa27.17■■□□□ 1.94
CD58-204ENST00000464088 TSPYL4Q9UJ04 414 aa27.17■■□□□ 1.94
CD58-204ENST00000464088 EIF4A1P60842 406 aaKnown RBP27.16■■□□□ 1.94
CD58-204ENST00000464088 CALD1Q05682 793 aaKnown RBP27.16■■□□□ 1.94
CD58-204ENST00000464088 CFAP44Q96MT7 982 aa27.16■■□□□ 1.94
CD58-204ENST00000464088 SALL2Q9Y467 1007 aaPredicted RBP27.16■■□□□ 1.94
CD58-204ENST00000464088 HSPA1AP0DMV8 641 aaKnown RBP27.15■■□□□ 1.94
CD58-204ENST00000464088 HSPA1BP0DMV9 641 aaKnown RBP27.15■■□□□ 1.94
CD58-204ENST00000464088 NFIXQ14938 502 aa27.15■■□□□ 1.94
CD58-204ENST00000464088 IFT57Q9NWB7 429 aa27.15■■□□□ 1.94
CD58-204ENST00000464088 NARFQ9UHQ1 456 aa27.15■■□□□ 1.94
CD58-204ENST00000464088 CYP19A1P11511 503 aaPredicted RBP27.13■■□□□ 1.93
CD58-204ENST00000464088 TTLL6Q8N841 843 aa27.13■■□□□ 1.93
CD58-204ENST00000464088 LAS1LQ9Y4W2 734 aaKnown RBP27.13■■□□□ 1.93
CD58-204ENST00000464088 ZNF521Q96K83 1311 aa27.13■■□□□ 1.93
CD58-204ENST00000464088 IL16Q14005 1332 aa27.12■■□□□ 1.93
CD58-204ENST00000464088 LAMB4A4D0S4 1761 aa27.12■■□□□ 1.93
CD58-204ENST00000464088 PRAMEF22A3QJZ6 481 aa27.11■■□□□ 1.93
CD58-204ENST00000464088 POTECB2RU33 542 aa27.11■■□□□ 1.93
CD58-204ENST00000464088 SNRPA1P09661 255 aaKnown RBP27.11■■□□□ 1.93
CD58-204ENST00000464088 GNAI1P63096 354 aa27.11■■□□□ 1.93
CD58-204ENST00000464088 WDR63Q8IWG1 891 aa27.11■■□□□ 1.93
CD58-204ENST00000464088 MBIPQ9NS73 344 aa27.11■■□□□ 1.93
CD58-204ENST00000464088 COL15A1P39059 1388 aa27.1■■□□□ 1.93
CD58-204ENST00000464088 DICER1Q9UPY3 1922 aaKnown RBP27.1■■□□□ 1.93
CD58-204ENST00000464088 SERPINB2P05120 415 aa27.1■■□□□ 1.93
CD58-204ENST00000464088 TEX13AQ9BXU3 409 aaPredicted RBP27.1■■□□□ 1.93
CD58-204ENST00000464088 BCL2L12Q9HB09 334 aa27.1■■□□□ 1.93
CD58-204ENST00000464088 NFKBIEO00221 500 aa27.09■■□□□ 1.93
CD58-204ENST00000464088 USP16Q9Y5T5 823 aa27.08■■□□□ 1.93
CD58-204ENST00000464088 C2CD5Q86YS7 1000 aa27.07■■□□□ 1.92
CD58-204ENST00000464088 H0YIN7 160 aa27.06■■□□□ 1.92
CD58-204ENST00000464088 STARD3NLO95772 234 aa27.06■■□□□ 1.92
CD58-204ENST00000464088 ZBTB1Q9Y2K1 713 aa27.06■■□□□ 1.92
CD58-204ENST00000464088 FER1L6Q2WGJ9 1857 aa27.06■■□□□ 1.92
CD58-204ENST00000464088 DPY19L2Q6NUT2 758 aa27.05■■□□□ 1.92
CD58-204ENST00000464088 ANKRD31Q8N7Z5 1873 aa27.04■■□□□ 1.92
CD58-204ENST00000464088 KRT24Q2M2I5 525 aa27.04■■□□□ 1.92
CD58-204ENST00000464088 SPINK5Q9NQ38 1064 aaPredicted RBP27.04■■□□□ 1.92
CD58-204ENST00000464088 CARMIL3Q8ND23 1372 aa27.04■■□□□ 1.92
CD58-204ENST00000464088 TSR2Q969E8 191 aaKnown RBP27.02■■□□□ 1.92
CD58-204ENST00000464088 A1BGP04217 495 aa27.01■■□□□ 1.91
CD58-204ENST00000464088 CREBZFQ9NS37 354 aa27.01■■□□□ 1.91
CD58-204ENST00000464088 PDZRN3Q9UPQ7 1066 aa27.01■■□□□ 1.91
CD58-204ENST00000464088 FANCIQ9NVI1 1328 aa26.99■■□□□ 1.91
CD58-204ENST00000464088 HOXB7P09629 217 aa26.98■■□□□ 1.91
CD58-204ENST00000464088 CANXP27824 592 aaKnown RBP26.98■■□□□ 1.91
CD58-204ENST00000464088 COL11A2P13942 1736 aaPredicted RBP26.98■■□□□ 1.91
CD58-204ENST00000464088 LTBP3Q9NS15 1303 aa26.97■■□□□ 1.91
CD58-204ENST00000464088 NBPF26B4DH59 902 aa26.97■■□□□ 1.91
CD58-204ENST00000464088 EIF5P55010 431 aaKnown RBP26.97■■□□□ 1.91
CD58-204ENST00000464088 ERFEQ4G0M1 354 aa26.97■■□□□ 1.91
CD58-204ENST00000464088 CHADLQ6NUI6 762 aa26.97■■□□□ 1.91
CD58-204ENST00000464088 NBPF10Q6P3W6 841 aaKnown RBP26.97■■□□□ 1.91
CD58-204ENST00000464088 NBPF15Q8N660 670 aa26.97■■□□□ 1.91
CD58-204ENST00000464088 DUSP27Q5VZP5 1158 aa26.96■■□□□ 1.91
CD58-204ENST00000464088 C8orf58Q8NAV2 365 aa26.96■■□□□ 1.91
CD58-204ENST00000464088 BRIP1Q9BX63 1249 aa26.96■■□□□ 1.91
CD58-204ENST00000464088 SCN7AQ01118 1682 aa26.95■■□□□ 1.91
CD58-204ENST00000464088 A0A087WZG4 1122 aa26.95■■□□□ 1.9
CD58-204ENST00000464088 PDE6BP35913 854 aa26.95■■□□□ 1.9
CD58-204ENST00000464088 IL6STP40189 918 aaPredicted RBP26.95■■□□□ 1.9
CD58-204ENST00000464088 GOLGA2Q08379 1002 aa26.95■■□□□ 1.9
CD58-204ENST00000464088 C21orf2O43822 256 aa26.94■■□□□ 1.9
CD58-204ENST00000464088 PIP4K2AP48426 406 aaPredicted RBP26.94■■□□□ 1.9
CD58-204ENST00000464088 HNRNPUQ00839 825 aaKnown RBP eCLIP26.94■■□□□ 1.9
CD58-204ENST00000464088 BICDL1Q6ZP65 573 aa26.94■■□□□ 1.9
CD58-204ENST00000464088 ZNF622Q969S3 477 aaKnown RBP eCLIP26.94■■□□□ 1.94e-6■□□□□ 9.9
CD58-204ENST00000464088 MYH16Q9H6N6 1097 aa26.94■■□□□ 1.9
CD58-204ENST00000464088 ERBB4Q15303 1308 aa26.93■■□□□ 1.9
CD58-204ENST00000464088 TSPYL6Q8N831 410 aa26.93■■□□□ 1.9
CD58-204ENST00000464088 EIF2S2P20042 333 aaKnown RBP26.92■■□□□ 1.9
CD58-204ENST00000464088 SLFN5Q08AF3 891 aa26.92■■□□□ 1.9
CD58-204ENST00000464088 TBC1D9BQ66K14 1250 aa26.92■■□□□ 1.9
CD58-204ENST00000464088 MKRN1Q9UHC7 482 aaKnown RBP26.92■■□□□ 1.9
CD58-204ENST00000464088 ARFGEF2Q9Y6D5 1785 aa26.92■■□□□ 1.9
CD58-204ENST00000464088 E9PSI1 815 aa26.91■■□□□ 1.9
CD58-204ENST00000464088 PDIA6Q15084 440 aa26.91■■□□□ 1.9
CD58-204ENST00000464088 PRR5LQ6MZQ0 368 aa26.91■■□□□ 1.9
CD58-204ENST00000464088 SLX4Q8IY92 1834 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 CNTNAP1P78357 1384 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 ELL2O00472 640 aaPredicted RBP26.9■■□□□ 1.9
CD58-204ENST00000464088 POTEIP0CG38 1075 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 POTEJP0CG39 1038 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 LRP10Q7Z4F1 713 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 CDCA7LQ96GN5 454 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 TAOK3Q9H2K8 898 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 SCN4AP35499 1836 aa26.9■■□□□ 1.9
CD58-204ENST00000464088 DDNO94850 711 aaPredicted RBP26.89■■□□□ 1.9
CD58-204ENST00000464088 TRMT2AQ8IZ69 625 aaKnown RBP26.89■■□□□ 1.9
CD58-204ENST00000464088 PRDM10Q9NQV6 1147 aa26.89■■□□□ 1.9
CD58-204ENST00000464088 PASKQ96RG2 1323 aa26.89■■□□□ 1.89
CD58-204ENST00000464088 CACNA1SQ13698 1873 aa26.88■■□□□ 1.89
CD58-204ENST00000464088 FOXN1O15353 648 aa26.88■■□□□ 1.89
CD58-204ENST00000464088 EXOSC9Q06265 439 aaKnown RBP26.88■■□□□ 1.89
CD58-204ENST00000464088 HDGFL1Q5TGJ6 251 aa26.88■■□□□ 1.89
CD58-204ENST00000464088 ZNF219Q9P2Y4 722 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms