RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 SCN7AQ01118 1682 aa26.05■■□□□ 1.76
NUP43-205ENST00000463048 MMP10P09238 476 aa26.04■■□□□ 1.76
NUP43-205ENST00000463048 HLFQ16534 295 aa26.04■■□□□ 1.76
NUP43-205ENST00000463048 NLGN1Q8N2Q7 840 aa26.04■■□□□ 1.76
NUP43-205ENST00000463048 HYPKQ9NX55 129 aa26.04■■□□□ 1.76
NUP43-205ENST00000463048 BCORQ6W2J9 1755 aa26.03■■□□□ 1.76
NUP43-205ENST00000463048 SLC4A2P04920 1241 aa26.03■■□□□ 1.76
NUP43-205ENST00000463048 KLHL34Q8N239 644 aa26.03■■□□□ 1.76
NUP43-205ENST00000463048 PPP1R1BQ9UD71 204 aaPredicted RBP26.03■■□□□ 1.76
NUP43-205ENST00000463048 TBC1D9BQ66K14 1250 aa26.02■■□□□ 1.76
NUP43-205ENST00000463048 CHMP4AQ9BY43 222 aa26.02■■□□□ 1.76
NUP43-205ENST00000463048 MAP3K15Q6ZN16 1313 aa26.02■■□□□ 1.76
NUP43-205ENST00000463048 G2E3Q7L622 706 aa26.01■■□□□ 1.75
NUP43-205ENST00000463048 SGIP1Q9BQI5 828 aa26.01■■□□□ 1.75
NUP43-205ENST00000463048 NFIXQ14938 502 aa26■■□□□ 1.75
NUP43-205ENST00000463048 BCL2L13Q9BXK5 485 aa25.99■■□□□ 1.75
NUP43-205ENST00000463048 ZNF652Q9Y2D9 606 aa25.99■■□□□ 1.75
NUP43-205ENST00000463048 DDR1Q08345 913 aa25.98■■□□□ 1.75
NUP43-205ENST00000463048 ZNF428Q96B54 188 aa25.98■■□□□ 1.75
NUP43-205ENST00000463048 PARP3Q9Y6F1 533 aa25.98■■□□□ 1.75
NUP43-205ENST00000463048 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
NUP43-205ENST00000463048 LRP5O75197 1615 aa25.97■■□□□ 1.75
NUP43-205ENST00000463048 FAM177BA6PVY3 158 aa25.97■■□□□ 1.75
NUP43-205ENST00000463048 GPTP24298 496 aa25.97■■□□□ 1.75
NUP43-205ENST00000463048 ERVV-1B6SEH8 477 aa25.96■■□□□ 1.75
NUP43-205ENST00000463048 TM4SF1P30408 202 aa25.96■■□□□ 1.75
NUP43-205ENST00000463048 ANKRD13DQ6ZTN6 518 aa25.96■■□□□ 1.75
NUP43-205ENST00000463048 NUP98P52948 1817 aa25.95■■□□□ 1.75
NUP43-205ENST00000463048 RIC3Q7Z5B4 369 aa25.95■■□□□ 1.74
NUP43-205ENST00000463048 NIP7Q9Y221 180 aaKnown RBP eCLIP25.95■■□□□ 1.74
NUP43-205ENST00000463048 SSH1Q8WYL5 1049 aa25.94■■□□□ 1.74
NUP43-205ENST00000463048 SETDB2Q96T68 719 aa25.94■■□□□ 1.74
NUP43-205ENST00000463048 POLRMTO00411 1230 aaKnown RBP25.93■■□□□ 1.74
NUP43-205ENST00000463048 FLIIQ13045 1269 aa25.93■■□□□ 1.74
NUP43-205ENST00000463048 CLEC4GQ6UXB4 293 aa25.93■■□□□ 1.74
NUP43-205ENST00000463048 GIGYF2Q6Y7W6 1299 aaKnown RBP25.93■■□□□ 1.74
NUP43-205ENST00000463048 CCDC24Q8N4L8 307 aa25.93■■□□□ 1.74
NUP43-205ENST00000463048 PLBD2Q8NHP8 589 aa25.93■■□□□ 1.74
NUP43-205ENST00000463048 FKBP5Q13451 457 aaPredicted RBP25.92■■□□□ 1.74
NUP43-205ENST00000463048 SMC4Q9NTJ3 1288 aa25.92■■□□□ 1.74
NUP43-205ENST00000463048 NPHP1O15259 732 aa25.91■■□□□ 1.74
NUP43-205ENST00000463048 DDX58O95786 925 aaKnown RBP25.91■■□□□ 1.74
NUP43-205ENST00000463048 SERPINB2P05120 415 aa25.91■■□□□ 1.74
NUP43-205ENST00000463048 MRPL50Q8N5N7 158 aaKnown RBP25.91■■□□□ 1.74
NUP43-205ENST00000463048 ARFGEF2Q9Y6D5 1785 aa25.91■■□□□ 1.74
NUP43-205ENST00000463048 ATP5J2-PTCD1G3V325 749 aa25.9■■□□□ 1.74
NUP43-205ENST00000463048 FHDC1Q9C0D6 1143 aaPredicted RBP25.9■■□□□ 1.74
NUP43-205ENST00000463048 MAP3K2Q9Y2U5 619 aa25.9■■□□□ 1.74
NUP43-205ENST00000463048 PI4KAP2A4QPH2 592 aa25.89■■□□□ 1.74
NUP43-205ENST00000463048 PI4KAP1Q8N8J0 262 aa25.89■■□□□ 1.74
NUP43-205ENST00000463048 MYD88Q99836 296 aa25.89■■□□□ 1.74
NUP43-205ENST00000463048 CARMIL3Q8ND23 1372 aa25.89■■□□□ 1.74
NUP43-205ENST00000463048 AFDNP55196 1824 aaKnown RBP25.88■■□□□ 1.73
NUP43-205ENST00000463048 CT47B1P0C2W7 299 aaPredicted RBP25.88■■□□□ 1.73
NUP43-205ENST00000463048 NBPF5PQ86XG9 351 aaPredicted RBP25.88■■□□□ 1.73
NUP43-205ENST00000463048 UBN2Q6ZU65 1347 aa25.88■■□□□ 1.73
NUP43-205ENST00000463048 ADCY9O60503 1353 aa25.87■■□□□ 1.73
NUP43-205ENST00000463048 RARSP54136 660 aaKnown RBP25.87■■□□□ 1.73
NUP43-205ENST00000463048 TCIRG1Q13488 830 aa25.87■■□□□ 1.73
NUP43-205ENST00000463048 KSR2Q6VAB6 950 aa25.87■■□□□ 1.73
NUP43-205ENST00000463048 ZNF34Q8IZ26 560 aa25.87■■□□□ 1.73
NUP43-205ENST00000463048 ANKRD36CQ5JPF3 1778 aa25.87■■□□□ 1.73
NUP43-205ENST00000463048 CACNA1FO60840 1977 aa25.86■■□□□ 1.73
NUP43-205ENST00000463048 F6X3S4 739 aa25.86■■□□□ 1.73
NUP43-205ENST00000463048 ALDH1L2Q3SY69 923 aa25.86■■□□□ 1.73
NUP43-205ENST00000463048 HSP90AB3PQ58FF7 597 aa25.86■■□□□ 1.73
NUP43-205ENST00000463048 ATP10DQ9P241 1426 aa25.86■■□□□ 1.73
NUP43-205ENST00000463048 CNBD1Q8NA66 436 aa25.85■■□□□ 1.73
NUP43-205ENST00000463048 RGL2O15211 777 aa25.84■■□□□ 1.73
NUP43-205ENST00000463048 SUSD4Q5VX71 490 aa25.84■■□□□ 1.73
NUP43-205ENST00000463048 SRCAPQ6ZRS2 3230 aa25.84■■□□□ 1.73
NUP43-205ENST00000463048 BCAR3O75815 825 aa25.83■■□□□ 1.73
NUP43-205ENST00000463048 GTF2E1P29083 439 aaPredicted RBP25.83■■□□□ 1.73
NUP43-205ENST00000463048 PRR5LQ6MZQ0 368 aa25.83■■□□□ 1.73
NUP43-205ENST00000463048 NUTM1Q86Y26 1132 aa25.83■■□□□ 1.73
NUP43-205ENST00000463048 METTL22Q9BUU2 404 aaPredicted RBP25.83■■□□□ 1.73
NUP43-205ENST00000463048 NLRP10Q86W26 655 aa25.82■■□□□ 1.72
NUP43-205ENST00000463048 NLGN2Q8NFZ4 835 aa25.82■■□□□ 1.72
NUP43-205ENST00000463048 WWC3Q9ULE0 1092 aa25.82■■□□□ 1.72
NUP43-205ENST00000463048 RTL5Q5HYW3 569 aaPredicted RBP25.81■■□□□ 1.72
NUP43-205ENST00000463048 SLC4A10Q6U841 1118 aa25.81■■□□□ 1.72
NUP43-205ENST00000463048 DNAAF4Q8WXU2 420 aa25.81■■□□□ 1.72
NUP43-205ENST00000463048 SYT17Q9BSW7 474 aa25.81■■□□□ 1.72
NUP43-205ENST00000463048 ISCA1Q9BUE6 129 aa25.81■■□□□ 1.72
NUP43-205ENST00000463048 NOB1Q9ULX3 412 aaKnown RBP25.81■■□□□ 1.72
NUP43-205ENST00000463048 C10orf71Q711Q0 1435 aa25.8■■□□□ 1.72
NUP43-205ENST00000463048 NRXN2Q9P2S2 1712 aa25.8■■□□□ 1.72
NUP43-205ENST00000463048 ST5P78524 1137 aa25.8■■□□□ 1.72
NUP43-205ENST00000463048 NEXNQ0ZGT2 675 aa25.8■■□□□ 1.72
NUP43-205ENST00000463048 ERFEQ4G0M1 354 aa25.8■■□□□ 1.72
NUP43-205ENST00000463048 PARP10Q53GL7 1025 aa25.8■■□□□ 1.72
NUP43-205ENST00000463048 TPTE2Q6XPS3 522 aa25.8■■□□□ 1.72
NUP43-205ENST00000463048 CWF19L2Q2TBE0 894 aaKnown RBP25.79■■□□□ 1.72
NUP43-205ENST00000463048 PPP1R42Q7Z4L9 355 aa25.79■■□□□ 1.72
NUP43-205ENST00000463048 JARID2Q92833 1246 aaPredicted RBP25.79■■□□□ 1.72
NUP43-205ENST00000463048 FRAT1Q92837 279 aaPredicted RBP25.79■■□□□ 1.72
NUP43-205ENST00000463048 UTP14AQ9BVJ6 771 aaKnown RBP25.79■■□□□ 1.72
NUP43-205ENST00000463048 TRMT112Q9UI30 125 aaKnown RBP25.79■■□□□ 1.72
NUP43-205ENST00000463048 NTSR2O95665 410 aa25.78■■□□□ 1.72
NUP43-205ENST00000463048 SYNE4Q8N205 404 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms