RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 IFIT1P09914 478 aaKnown RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 CAVIN4Q5BKX8 364 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 LDHAL6AQ6ZMR3 332 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 SIL1Q9H173 461 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 LARGE2Q8N3Y3 721 aa11.43□□□□□ -0.58
DDX39B-215ENST00000462256 ZNF526Q8TF50 670 aaPredicted RBP11.43□□□□□ -0.58
DDX39B-215ENST00000462256 SOGA3Q5TF21 947 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 JARID2Q92833 1246 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-215ENST00000462256 ARHGEF1Q92888 912 aaKnown RBP11.42□□□□□ -0.58
DDX39B-215ENST00000462256 CHAF1AQ13111 956 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-215ENST00000462256 PLBD2Q8NHP8 589 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 PDZRN3Q9UPQ7 1066 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 GJA3Q9Y6H8 435 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 ERBB4Q15303 1308 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 PXDNQ92626 1479 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 TTLL12Q14166 644 aaPredicted RBP11.42□□□□□ -0.58
DDX39B-215ENST00000462256 C8orf58Q8NAV2 365 aa11.42□□□□□ -0.58
DDX39B-215ENST00000462256 CHL1O00533 1208 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 HCLS1P14317 486 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-215ENST00000462256 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 OGFOD1Q8N543 542 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-215ENST00000462256 SOS1Q07889 1333 aaPredicted RBP11.41□□□□□ -0.58
DDX39B-215ENST00000462256 FGD1P98174 961 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 ILDR2Q71H61 639 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 ZMYND15Q9H091 742 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 NWD1Q149M9 1564 aa11.41□□□□□ -0.58
DDX39B-215ENST00000462256 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 CLASRPQ8N2M8 674 aaKnown RBP11.4□□□□□ -0.58
DDX39B-215ENST00000462256 SUPT20HQ8NEM7 779 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 FAM89AQ96GI7 184 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 NARFQ9UHQ1 456 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 SRGAP3O43295 1099 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 SLFN5Q08AF3 891 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
DDX39B-215ENST00000462256 TTLL6Q8N841 843 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
DDX39B-215ENST00000462256 HEG1Q9ULI3 1381 aa11.4□□□□□ -0.59
DDX39B-215ENST00000462256 CD163L1Q9NR16 1453 aa11.4□□□□□ -0.59
DDX39B-215ENST00000462256 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 CCDC158Q5M9N0 1113 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 DPP8Q6V1X1 898 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-215ENST00000462256 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 ATF7IPQ6VMQ6 1270 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
DDX39B-215ENST00000462256 WDHD1O75717 1129 aaPredicted RBP11.39□□□□□ -0.59
DDX39B-215ENST00000462256 GRM1Q13255 1194 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
DDX39B-215ENST00000462256 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
DDX39B-215ENST00000462256 TCIRG1Q13488 830 aa11.38□□□□□ -0.59
DDX39B-215ENST00000462256 TTLL7Q6ZT98 887 aa11.38□□□□□ -0.59
DDX39B-215ENST00000462256 KIAA1211Q6ZU35 1233 aa11.38□□□□□ -0.59
DDX39B-215ENST00000462256 CWC22Q9HCG8 908 aaKnown RBP11.38□□□□□ -0.59
DDX39B-215ENST00000462256 HDAC9Q9UKV0 1011 aa11.38□□□□□ -0.59
DDX39B-215ENST00000462256 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
DDX39B-215ENST00000462256 ERC1Q8IUD2 1116 aa11.38□□□□□ -0.59
DDX39B-215ENST00000462256 CCDC191Q8NCU4 936 aa11.38□□□□□ -0.59
DDX39B-215ENST00000462256 PTPRCP08575 1304 aa11.37□□□□□ -0.59
DDX39B-215ENST00000462256 MAP3K15Q6ZN16 1313 aa11.37□□□□□ -0.59
DDX39B-215ENST00000462256 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
DDX39B-215ENST00000462256 RGS3P49796 1198 aa11.37□□□□□ -0.59
DDX39B-215ENST00000462256 WASHC4Q2M389 1173 aa11.37□□□□□ -0.59
DDX39B-215ENST00000462256 ZSCAN29Q8IWY8 852 aaPredicted RBP11.37□□□□□ -0.59
DDX39B-215ENST00000462256 CLEC4GQ6UXB4 293 aa11.37□□□□□ -0.59
DDX39B-215ENST00000462256 NCBP3Q53F19 620 aaKnown RBP11.37□□□□□ -0.59
DDX39B-215ENST00000462256 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 MYO1BO43795 1136 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 ALDH1L1O75891 902 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 CYP19A1P11511 503 aaPredicted RBP11.36□□□□□ -0.59
DDX39B-215ENST00000462256 TTC39AQ5SRH9 613 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 RBM26Q5T8P6 1007 aaKnown RBP11.36□□□□□ -0.59
DDX39B-215ENST00000462256 TNS2Q63HR2 1409 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 PANK1Q8TE04 598 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 ABCF2Q9UG63 623 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 SLC5A1P13866 664 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 MPNDQ8N594 471 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 PHAXQ9H814 394 aaKnown RBP11.36□□□□□ -0.59
DDX39B-215ENST00000462256 AKAP2Q9Y2D5 859 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 XRN1Q8IZH2 1706 aaKnown RBP11.36□□□□□ -0.59
DDX39B-215ENST00000462256 GRM8O00222 908 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 APPP05067 770 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 LMBR1LQ6UX01 489 aa11.36□□□□□ -0.59
DDX39B-215ENST00000462256 GIGYF2Q6Y7W6 1299 aaKnown RBP11.36□□□□□ -0.59
DDX39B-215ENST00000462256 ATRNO75882 1429 aa11.35□□□□□ -0.59
DDX39B-215ENST00000462256 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-215ENST00000462256 RGS17Q9UGC6 210 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-215ENST00000462256 RAD21O60216 631 aa11.35□□□□□ -0.59
DDX39B-215ENST00000462256 ANKRD45Q5TZF3 282 aa11.35□□□□□ -0.59
DDX39B-215ENST00000462256 COL23A1Q86Y22 540 aaPredicted RBP11.35□□□□□ -0.59
DDX39B-215ENST00000462256 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
DDX39B-215ENST00000462256 LINC00116Q8NCU8 138 aa11.35□□□□□ -0.59
DDX39B-215ENST00000462256 CTDP1Q9Y5B0 961 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms