RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 BCL9LQ86UU0 1499 aa15.29■□□□□ 0.04
COL4A6-204ENST00000461897 PTCD1O75127 700 aaKnown RBP15.29■□□□□ 0.04
COL4A6-204ENST00000461897 UBTFL1P0CB47 393 aaPredicted RBP15.29■□□□□ 0.04
COL4A6-204ENST00000461897 GSPT1P15170 499 aaKnown RBP15.29■□□□□ 0.04
COL4A6-204ENST00000461897 XAGE3Q8WTP9 111 aa15.29■□□□□ 0.04
COL4A6-204ENST00000461897 ARFGEF2Q9Y6D5 1785 aa15.28■□□□□ 0.04
COL4A6-204ENST00000461897 DDX58O95786 925 aaKnown RBP15.28■□□□□ 0.04
COL4A6-204ENST00000461897 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
COL4A6-204ENST00000461897 TTC22Q5TAA0 569 aa15.27■□□□□ 0.04
COL4A6-204ENST00000461897 COPS6Q7L5N1 327 aa15.27■□□□□ 0.04
COL4A6-204ENST00000461897 RRAGDQ9NQL2 400 aaPredicted RBP15.27■□□□□ 0.04
COL4A6-204ENST00000461897 ASAP1Q9ULH1 1129 aa15.27■□□□□ 0.04
COL4A6-204ENST00000461897 ERBB4Q15303 1308 aa15.27■□□□□ 0.04
COL4A6-204ENST00000461897 PNMA6EA0A0J9YXQ4 647 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 NBPF26B4DH59 902 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 HMMRO75330 724 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 ALDH1L1O75891 902 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 CD2BP2O95400 341 aaKnown RBP15.27■□□□□ 0.03
COL4A6-204ENST00000461897 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.03
COL4A6-204ENST00000461897 NBPF14Q5TI25 921 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 NBPF10Q6P3W6 841 aaKnown RBP15.27■□□□□ 0.03
COL4A6-204ENST00000461897 BARGINQ6ZT62 677 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 UNC5CLQ8IV45 518 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 NBPF15Q8N660 670 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 C8orf37Q96NL8 207 aa15.27■□□□□ 0.03
COL4A6-204ENST00000461897 RABEP1Q15276 862 aa15.26■□□□□ 0.03
COL4A6-204ENST00000461897 DDB1Q16531 1140 aa15.26■□□□□ 0.03
COL4A6-204ENST00000461897 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
COL4A6-204ENST00000461897 NUP188Q5SRE5 1749 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 SPATA31A6Q5VVP1 1343 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 ATP8B2P98198 1209 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 RIC3Q7Z5B4 369 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 LINS1Q8NG48 757 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
COL4A6-204ENST00000461897 KAT6BQ8WYB5 2073 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.25■□□□□ 0.03
COL4A6-204ENST00000461897 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 GZF1Q9H116 711 aaPredicted RBP15.25■□□□□ 0.03
COL4A6-204ENST00000461897 GRPEL1Q9HAV7 217 aa15.25■□□□□ 0.03
COL4A6-204ENST00000461897 IBTKQ9P2D0 1353 aaPredicted RBP15.24■□□□□ 0.03
COL4A6-204ENST00000461897 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
COL4A6-204ENST00000461897 FNBP4Q8N3X1 1017 aaPredicted RBP15.24■□□□□ 0.03
COL4A6-204ENST00000461897 NGLY1Q96IV0 654 aa15.24■□□□□ 0.03
COL4A6-204ENST00000461897 A1BGP04217 495 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 MARCH10Q8NA82 808 aaPredicted RBP15.23■□□□□ 0.03
COL4A6-204ENST00000461897 METTL22Q9BUU2 404 aaPredicted RBP15.23■□□□□ 0.03
COL4A6-204ENST00000461897 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
COL4A6-204ENST00000461897 UTYO14607 1347 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 CLCN1P35523 988 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 VPS72Q15906 364 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 VSIG10Q8N0Z9 540 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 SSH3Q8TE77 659 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 USP26Q9BXU7 913 aa15.23■□□□□ 0.03
COL4A6-204ENST00000461897 TJP1Q07157 1748 aa15.22■□□□□ 0.03
COL4A6-204ENST00000461897 NEURL1BA8MQ27 555 aa15.22■□□□□ 0.03
COL4A6-204ENST00000461897 SYTL4Q96C24 671 aaPredicted RBP15.22■□□□□ 0.03
COL4A6-204ENST00000461897 MYD88Q99836 296 aa15.22■□□□□ 0.03
COL4A6-204ENST00000461897 EXOC6BQ9Y2D4 811 aa15.22■□□□□ 0.03
COL4A6-204ENST00000461897 APBB1O00213 710 aa15.21■□□□□ 0.03
COL4A6-204ENST00000461897 GRM8O00222 908 aa15.21■□□□□ 0.03
COL4A6-204ENST00000461897 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
COL4A6-204ENST00000461897 HSPA1LP34931 641 aa15.21■□□□□ 0.03
COL4A6-204ENST00000461897 PRIM1P49642 420 aaKnown RBP15.21■□□□□ 0.03
COL4A6-204ENST00000461897 POLA2Q14181 598 aa15.21■□□□□ 0.03
COL4A6-204ENST00000461897 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.03
COL4A6-204ENST00000461897 DNAJC10Q8IXB1 793 aa15.21■□□□□ 0.03
COL4A6-204ENST00000461897 SLC4A9Q96Q91 983 aa15.21■□□□□ 0.03
COL4A6-204ENST00000461897 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
COL4A6-204ENST00000461897 C9orf78Q9NZ63 289 aaPredicted RBP15.21■□□□□ 0.03
COL4A6-204ENST00000461897 NEXNQ0ZGT2 675 aa15.2■□□□□ 0.02
COL4A6-204ENST00000461897 FAM98CQ17RN3 349 aaKnown RBP15.2■□□□□ 0.02
COL4A6-204ENST00000461897 C16orf71Q8IYS4 520 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-204ENST00000461897 PLBD2Q8NHP8 589 aa15.2■□□□□ 0.02
COL4A6-204ENST00000461897 CYP2E1P05181 493 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-204ENST00000461897 HSP90AA1P07900 732 aaKnown RBP15.2■□□□□ 0.02
COL4A6-204ENST00000461897 TTLL7Q6ZT98 887 aa15.2■□□□□ 0.02
COL4A6-204ENST00000461897 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
COL4A6-204ENST00000461897 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
COL4A6-204ENST00000461897 SRGAP3O43295 1099 aa15.19■□□□□ 0.02
COL4A6-204ENST00000461897 MTX1Q13505 466 aa15.19■□□□□ 0.02
COL4A6-204ENST00000461897 GCKRQ14397 625 aa15.19■□□□□ 0.02
COL4A6-204ENST00000461897 KAZALD1Q96I82 304 aa15.19■□□□□ 0.02
COL4A6-204ENST00000461897 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.19■□□□□ 0.02
COL4A6-204ENST00000461897 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
COL4A6-204ENST00000461897 SUCLG2Q96I99 432 aa15.18■□□□□ 0.02
COL4A6-204ENST00000461897 TEX13AQ9BXU3 409 aaPredicted RBP15.18■□□□□ 0.02
COL4A6-204ENST00000461897 USP21Q9UK80 565 aa15.18■□□□□ 0.02
COL4A6-204ENST00000461897 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
COL4A6-204ENST00000461897 NUCB2P80303 420 aa15.18■□□□□ 0.02
COL4A6-204ENST00000461897 KLHL40Q2TBA0 621 aa15.18■□□□□ 0.02
COL4A6-204ENST00000461897 ACSBG1Q96GR2 724 aa15.18■□□□□ 0.02
COL4A6-204ENST00000461897 SDSP20132 328 aa15.17■□□□□ 0.02
COL4A6-204ENST00000461897 SSFA2P28290 1259 aa15.17■□□□□ 0.02
COL4A6-204ENST00000461897 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
COL4A6-204ENST00000461897 GAS2L3Q86XJ1 694 aa15.17■□□□□ 0.02
COL4A6-204ENST00000461897 CWC22Q9HCG8 908 aaKnown RBP15.17■□□□□ 0.02
COL4A6-204ENST00000461897 BAG4O95429 457 aaKnown RBP15.16■□□□□ 0.02
COL4A6-204ENST00000461897 LRRCC1Q9C099 1032 aa15.16■□□□□ 0.02
COL4A6-204ENST00000461897 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms