RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 NSFL1CQ9UNZ2 370 aaKnown RBP17.07■□□□□ 0.32
NCL-207ENST00000461347 TNNT1P13805 278 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 RBM8AQ9Y5S9 174 aaKnown RBP17.06■□□□□ 0.32
NCL-207ENST00000461347 GUCY1B3Q02153 619 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 CCDC186Q7Z3E2 898 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 EVI5LQ96CN4 794 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 DACT1Q9NYF0 836 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 FAM173BQ6P4H8 233 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 SIGLEC1Q9BZZ2 1709 aa17.06■□□□□ 0.32
NCL-207ENST00000461347 TRDNQ13061 729 aa17.05■□□□□ 0.32
NCL-207ENST00000461347 MNS1Q8NEH6 495 aa17.05■□□□□ 0.32
NCL-207ENST00000461347 RBM33Q96EV2 1170 aaKnown RBP17.05■□□□□ 0.32
NCL-207ENST00000461347 ZNF396Q96N95 335 aaPredicted RBP17.05■□□□□ 0.32
NCL-207ENST00000461347 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
NCL-207ENST00000461347 IFT172Q9UG01 1749 aa17.05■□□□□ 0.32
NCL-207ENST00000461347 ZNF500O60304 480 aaPredicted RBP17.05■□□□□ 0.32
NCL-207ENST00000461347 KRT32Q14532 448 aa17.05■□□□□ 0.32
NCL-207ENST00000461347 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
NCL-207ENST00000461347 FAM200AQ8TCP9 573 aa17.04■□□□□ 0.32
NCL-207ENST00000461347 ZC3H13Q5T200 1668 aaKnown RBP17.04■□□□□ 0.32
NCL-207ENST00000461347 DDX19AQ9NUU7 478 aaKnown RBP17.04■□□□□ 0.32
NCL-207ENST00000461347 TRMT1Q9NXH9 659 aaKnown RBP17.04■□□□□ 0.32
NCL-207ENST00000461347 SNX14Q9Y5W7 946 aa17.04■□□□□ 0.32
NCL-207ENST00000461347 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
NCL-207ENST00000461347 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
NCL-207ENST00000461347 ANO6Q4KMQ2 910 aa17.03■□□□□ 0.32
NCL-207ENST00000461347 KIF24Q5T7B8 1368 aa17.03■□□□□ 0.32
NCL-207ENST00000461347 CEBPAP49715 358 aaPredicted RBP17.03■□□□□ 0.32
NCL-207ENST00000461347 TRIM29Q14134 588 aa17.03■□□□□ 0.32
NCL-207ENST00000461347 UNC5CLQ8IV45 518 aa17.03■□□□□ 0.32
NCL-207ENST00000461347 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
NCL-207ENST00000461347 SGSM2O43147 1006 aa17.03■□□□□ 0.32
NCL-207ENST00000461347 PDIA4P13667 645 aaKnown RBP17.03■□□□□ 0.32
NCL-207ENST00000461347 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.32
NCL-207ENST00000461347 PTGS1P23219 599 aa17.02■□□□□ 0.32
NCL-207ENST00000461347 CCDC34Q96HJ3 373 aa17.02■□□□□ 0.32
NCL-207ENST00000461347 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.32
NCL-207ENST00000461347 EFCAB6Q5THR3 1501 aa17.02■□□□□ 0.31
NCL-207ENST00000461347 TERF1P54274 439 aa17.02■□□□□ 0.31
NCL-207ENST00000461347 LUZP1Q86V48 1076 aa17.02■□□□□ 0.31
NCL-207ENST00000461347 PTCH1Q13635 1447 aa17.02■□□□□ 0.31
NCL-207ENST00000461347 PTPN14Q15678 1187 aa17.01■□□□□ 0.31
NCL-207ENST00000461347 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
NCL-207ENST00000461347 NFXL1Q6ZNB6 911 aa17.01■□□□□ 0.31
NCL-207ENST00000461347 FLT4P35916 1363 aa17.01■□□□□ 0.31
NCL-207ENST00000461347 CCT2P78371 535 aaKnown RBP17.01■□□□□ 0.31
NCL-207ENST00000461347 TYRO3Q06418 890 aa17.01■□□□□ 0.31
NCL-207ENST00000461347 PDILTQ8N807 584 aa17.01■□□□□ 0.31
NCL-207ENST00000461347 IQGAP1P46940 1657 aa17.01■□□□□ 0.31
NCL-207ENST00000461347 RAD50Q92878 1312 aa17■□□□□ 0.31
NCL-207ENST00000461347 NBPF7P0C2Y1 421 aaPredicted RBP17■□□□□ 0.31
NCL-207ENST00000461347 HSPA4P34932 840 aa17■□□□□ 0.31
NCL-207ENST00000461347 PIBF1Q8WXW3 757 aa17■□□□□ 0.31
NCL-207ENST00000461347 DNAJC25Q9H1X3 360 aa17■□□□□ 0.31
NCL-207ENST00000461347 NLRP1Q9C000 1473 aa17■□□□□ 0.31
NCL-207ENST00000461347 KIAA0232Q92628 1395 aa17■□□□□ 0.31
NCL-207ENST00000461347 FAM177A1Q8N128 213 aaPredicted RBP17■□□□□ 0.31
NCL-207ENST00000461347 MYD88Q99836 296 aa17■□□□□ 0.31
NCL-207ENST00000461347 IQSEC2Q5JU85 1478 aa17■□□□□ 0.31
NCL-207ENST00000461347 ATP2B1P20020 1258 aa16.99■□□□□ 0.31
NCL-207ENST00000461347 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
NCL-207ENST00000461347 USP44Q9H0E7 712 aa16.99■□□□□ 0.31
NCL-207ENST00000461347 TNNT3P45378 269 aaPredicted RBP16.99■□□□□ 0.31
NCL-207ENST00000461347 NMIQ13287 307 aaPredicted RBP16.99■□□□□ 0.31
NCL-207ENST00000461347 ARGLU1Q9NWB6 273 aaPredicted RBP16.99■□□□□ 0.31
NCL-207ENST00000461347 IGSF3O75054 1194 aa16.98■□□□□ 0.31
NCL-207ENST00000461347 FKBP4Q02790 459 aaKnown RBP eCLIP16.98■□□□□ 0.31
NCL-207ENST00000461347 CREB3L3Q68CJ9 461 aa16.98■□□□□ 0.31
NCL-207ENST00000461347 STK11IPQ8N1F8 1099 aa16.98■□□□□ 0.31
NCL-207ENST00000461347 THEMISQ8N1K5 641 aaPredicted RBP16.98■□□□□ 0.31
NCL-207ENST00000461347 BRF1Q92994 677 aa16.98■□□□□ 0.31
NCL-207ENST00000461347 PES1O00541 588 aaKnown RBP16.98■□□□□ 0.31
NCL-207ENST00000461347 VPS53Q5VIR6 699 aa16.97■□□□□ 0.31
NCL-207ENST00000461347 LARP1Q6PKG0 1096 aaKnown RBP16.97■□□□□ 0.31
NCL-207ENST00000461347 SERPINC1P01008 464 aa16.97■□□□□ 0.31
NCL-207ENST00000461347 MYRIPQ8NFW9 859 aa16.97■□□□□ 0.31
NCL-207ENST00000461347 NEK1Q96PY6 1258 aa16.97■□□□□ 0.31
NCL-207ENST00000461347 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
NCL-207ENST00000461347 ZDHHC9Q9Y397 364 aa16.97■□□□□ 0.31
NCL-207ENST00000461347 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
NCL-207ENST00000461347 OSBPL3Q9H4L5 887 aa16.97■□□□□ 0.31
NCL-207ENST00000461347 PIK3C2BO00750 1634 aa16.97■□□□□ 0.31
NCL-207ENST00000461347 FSIP1Q8NA03 581 aa16.96■□□□□ 0.31
NCL-207ENST00000461347 ANO10Q9NW15 660 aa16.96■□□□□ 0.31
NCL-207ENST00000461347 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
NCL-207ENST00000461347 OLFM4Q6UX06 510 aa16.96■□□□□ 0.31
NCL-207ENST00000461347 TTC41PQ6P2S7 1318 aa16.96■□□□□ 0.31
NCL-207ENST00000461347 CUL4AQ13619 759 aa16.96■□□□□ 0.3
NCL-207ENST00000461347 RUFY3Q7L099 469 aa16.96■□□□□ 0.3
NCL-207ENST00000461347 RASEFQ8IZ41 740 aa16.96■□□□□ 0.3
NCL-207ENST00000461347 RASSF8Q8NHQ8 419 aa16.96■□□□□ 0.3
NCL-207ENST00000461347 CCDC171Q6TFL3 1326 aa16.95■□□□□ 0.3
NCL-207ENST00000461347 NPHP3Q7Z494 1330 aa16.95■□□□□ 0.3
NCL-207ENST00000461347 BIN1O00499 593 aa16.95■□□□□ 0.3
NCL-207ENST00000461347 DHX16O60231 1041 aaKnown RBP16.95■□□□□ 0.3
NCL-207ENST00000461347 DDIT3P35638 169 aa16.95■□□□□ 0.3
NCL-207ENST00000461347 DDX46Q7L014 1031 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms