RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 STX6O43752 255 aa18.53■□□□□ 0.56
SSR4-206ENST00000460616 RRS1Q15050 365 aaKnown RBP18.53■□□□□ 0.56
SSR4-206ENST00000460616 ATP6V1DQ9Y5K8 247 aa18.53■□□□□ 0.56
SSR4-206ENST00000460616 LRRCC1Q9C099 1032 aa18.52■□□□□ 0.56
SSR4-206ENST00000460616 SOS2Q07890 1332 aaPredicted RBP18.52■□□□□ 0.56
SSR4-206ENST00000460616 SALL3Q9BXA9 1300 aa18.52■□□□□ 0.56
SSR4-206ENST00000460616 TNS3Q68CZ2 1445 aa18.52■□□□□ 0.56
SSR4-206ENST00000460616 MED1Q15648 1581 aaPredicted RBP18.52■□□□□ 0.56
SSR4-206ENST00000460616 TOM1O60784 492 aa18.52■□□□□ 0.56
SSR4-206ENST00000460616 SYT1P21579 422 aa18.52■□□□□ 0.56
SSR4-206ENST00000460616 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
SSR4-206ENST00000460616 BBXQ8WY36 941 aaPredicted RBP18.52■□□□□ 0.56
SSR4-206ENST00000460616 SLC4A2P04920 1241 aa18.51■□□□□ 0.55
SSR4-206ENST00000460616 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
SSR4-206ENST00000460616 CRYBG1Q9Y4K1 1723 aa18.51■□□□□ 0.55
SSR4-206ENST00000460616 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
SSR4-206ENST00000460616 PHLPP1O60346 1717 aa18.51■□□□□ 0.55
SSR4-206ENST00000460616 AHDC1Q5TGY3 1603 aaPredicted RBP18.51■□□□□ 0.55
SSR4-206ENST00000460616 LTN1O94822 1766 aa18.51■□□□□ 0.55
SSR4-206ENST00000460616 KIAA0232Q92628 1395 aa18.51■□□□□ 0.55
SSR4-206ENST00000460616 SPATA31A3Q5VYP0 1347 aa18.5■□□□□ 0.55
SSR4-206ENST00000460616 F13A1P00488 732 aa18.5■□□□□ 0.55
SSR4-206ENST00000460616 HSPA4P34932 840 aa18.5■□□□□ 0.55
SSR4-206ENST00000460616 SYCP1Q15431 976 aa18.5■□□□□ 0.55
SSR4-206ENST00000460616 SBNO1A3KN83 1393 aa18.5■□□□□ 0.55
SSR4-206ENST00000460616 CHL1O00533 1208 aa18.5■□□□□ 0.55
SSR4-206ENST00000460616 CCDC192P0DO97 292 aa18.5■□□□□ 0.55
SSR4-206ENST00000460616 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.5■□□□□ 0.55
SSR4-206ENST00000460616 PHRF1Q9P1Y6 1649 aaKnown RBP18.5■□□□□ 0.55
SSR4-206ENST00000460616 PTGS1P23219 599 aa18.49■□□□□ 0.55
SSR4-206ENST00000460616 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
SSR4-206ENST00000460616 CTNNA3Q9UI47 895 aa18.49■□□□□ 0.55
SSR4-206ENST00000460616 GNAI2P04899 355 aa18.49■□□□□ 0.55
SSR4-206ENST00000460616 SMC3Q9UQE7 1217 aa18.48■□□□□ 0.55
SSR4-206ENST00000460616 NFAT5O94916 1531 aa18.48■□□□□ 0.55
SSR4-206ENST00000460616 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
SSR4-206ENST00000460616 CCT4P50991 539 aaKnown RBP18.48■□□□□ 0.55
SSR4-206ENST00000460616 GABPB1Q06547 395 aaPredicted RBP18.48■□□□□ 0.55
SSR4-206ENST00000460616 UNC5CLQ8IV45 518 aa18.48■□□□□ 0.55
SSR4-206ENST00000460616 COL16A1Q07092 1604 aaPredicted RBP18.48■□□□□ 0.55
SSR4-206ENST00000460616 SMTNL1A8MU46 457 aa18.47■□□□□ 0.55
SSR4-206ENST00000460616 CGNQ9P2M7 1197 aaKnown RBP18.47■□□□□ 0.55
SSR4-206ENST00000460616 STAP2Q9UGK3 403 aa18.47■□□□□ 0.55
SSR4-206ENST00000460616 LIMCH1Q9UPQ0 1083 aa18.47■□□□□ 0.55
SSR4-206ENST00000460616 SLIT3O75094 1523 aa18.47■□□□□ 0.55
SSR4-206ENST00000460616 ABCA3Q99758 1704 aa18.47■□□□□ 0.55
SSR4-206ENST00000460616 F6X3S4 739 aa18.47■□□□□ 0.55
SSR4-206ENST00000460616 DNM1Q05193 864 aaKnown RBP18.46■□□□□ 0.55
SSR4-206ENST00000460616 C16orf45Q96MC5 204 aaPredicted RBP18.46■□□□□ 0.55
SSR4-206ENST00000460616 LARP6Q9BRS8 491 aaKnown RBP18.46■□□□□ 0.55
SSR4-206ENST00000460616 IL25Q9H293 177 aa18.46■□□□□ 0.55
SSR4-206ENST00000460616 AATKQ6ZMQ8 1374 aa18.46■□□□□ 0.55
SSR4-206ENST00000460616 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.55
SSR4-206ENST00000460616 AK2P54819 239 aa18.46■□□□□ 0.55
SSR4-206ENST00000460616 CCDC186Q7Z3E2 898 aa18.46■□□□□ 0.55
SSR4-206ENST00000460616 DDX41Q9UJV9 622 aaKnown RBP18.46■□□□□ 0.55
SSR4-206ENST00000460616 TCHHQ07283 1943 aa18.46■□□□□ 0.55
SSR4-206ENST00000460616 FAM200AQ8TCP9 573 aa18.45■□□□□ 0.54
SSR4-206ENST00000460616 MCM10Q7L590 875 aa18.45■□□□□ 0.54
SSR4-206ENST00000460616 TTC14Q96N46 770 aa18.45■□□□□ 0.54
SSR4-206ENST00000460616 PAXBP1Q9Y5B6 917 aa18.45■□□□□ 0.54
SSR4-206ENST00000460616 MAP3K19Q56UN5 1328 aa18.45■□□□□ 0.54
SSR4-206ENST00000460616 TNNT1P13805 278 aa18.44■□□□□ 0.54
SSR4-206ENST00000460616 RUFY3Q7L099 469 aa18.44■□□□□ 0.54
SSR4-206ENST00000460616 DRC7Q8IY82 874 aa18.44■□□□□ 0.54
SSR4-206ENST00000460616 SNX14Q9Y5W7 946 aa18.44■□□□□ 0.54
SSR4-206ENST00000460616 G2E3Q7L622 706 aa18.44■□□□□ 0.54
SSR4-206ENST00000460616 MORC2Q9Y6X9 1032 aaPredicted RBP18.44■□□□□ 0.54
SSR4-206ENST00000460616 CDK12Q9NYV4 1490 aaPredicted RBP18.44■□□□□ 0.54
SSR4-206ENST00000460616 SLFN14P0C7P3 912 aa18.43■□□□□ 0.54
SSR4-206ENST00000460616 LRMPQ12912 555 aa18.43■□□□□ 0.54
SSR4-206ENST00000460616 CCDC112Q8NEF3 446 aa18.43■□□□□ 0.54
SSR4-206ENST00000460616 TMEM51Q9NW97 253 aa18.43■□□□□ 0.54
SSR4-206ENST00000460616 GCP02774 474 aa18.43■□□□□ 0.54
SSR4-206ENST00000460616 DLG5Q8TDM6 1919 aa18.43■□□□□ 0.54
SSR4-206ENST00000460616 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
SSR4-206ENST00000460616 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
SSR4-206ENST00000460616 PNMA6EA0A0J9YXQ4 647 aa18.42■□□□□ 0.54
SSR4-206ENST00000460616 NAA30Q147X3 362 aaPredicted RBP18.42■□□□□ 0.54
SSR4-206ENST00000460616 LUZP1Q86V48 1076 aa18.42■□□□□ 0.54
SSR4-206ENST00000460616 ATP8B2P98198 1209 aa18.42■□□□□ 0.54
SSR4-206ENST00000460616 MAP3K11Q16584 847 aa18.42■□□□□ 0.54
SSR4-206ENST00000460616 RTF1Q92541 710 aaKnown RBP18.42■□□□□ 0.54
SSR4-206ENST00000460616 MTMR6Q9Y217 621 aa18.42■□□□□ 0.54
SSR4-206ENST00000460616 GJB2P29033 226 aa18.41■□□□□ 0.54
SSR4-206ENST00000460616 KIF18AQ8NI77 898 aa18.41■□□□□ 0.54
SSR4-206ENST00000460616 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
SSR4-206ENST00000460616 MRVI1Q9Y6F6 885 aa18.41■□□□□ 0.54
SSR4-206ENST00000460616 RAD50Q92878 1312 aa18.41■□□□□ 0.54
SSR4-206ENST00000460616 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
SSR4-206ENST00000460616 TYRO3Q06418 890 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 CAMK4Q16566 473 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 ZSCAN25Q6NSZ9 544 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 GNAI3P08754 354 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 TPD52L1Q16890 204 aaPredicted RBP18.4■□□□□ 0.54
SSR4-206ENST00000460616 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 AEBP1Q8IUX7 1158 aa18.4■□□□□ 0.54
SSR4-206ENST00000460616 NUP62CLQ9H1M0 184 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms