RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 CCNL1Q9UK58 526 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-202ENST00000460514 TNS1Q9HBL0 1735 aaKnown RBP9.76□□□□□ -0.85
ABCA4-202ENST00000460514 ZNF831Q5JPB2 1677 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 HDGFL1Q5TGJ6 251 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 CCDC30Q5VVM6 783 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 PTF1AQ7RTS3 328 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 C8orf58Q8NAV2 365 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 L3MBTL3Q96JM7 780 aaPredicted RBP9.75□□□□□ -0.85
ABCA4-202ENST00000460514 STK31Q9BXU1 1019 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 ERBB4Q15303 1308 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 RGPD3A6NKT7 1758 aaPredicted RBP9.75□□□□□ -0.85
ABCA4-202ENST00000460514 RGPD4Q7Z3J3 1758 aa9.75□□□□□ -0.85
ABCA4-202ENST00000460514 LY75O60449 1722 aa9.74□□□□□ -0.85
ABCA4-202ENST00000460514 ELL2O00472 640 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-202ENST00000460514 NPM2Q86SE8 214 aaKnown RBP9.74□□□□□ -0.85
ABCA4-202ENST00000460514 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
ABCA4-202ENST00000460514 CICQ96RK0 1608 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-202ENST00000460514 LAMB4A4D0S4 1761 aa9.73□□□□□ -0.85
ABCA4-202ENST00000460514 VAMP4O75379 141 aa9.73□□□□□ -0.85
ABCA4-202ENST00000460514 HOXB1P14653 301 aaPredicted RBP9.73□□□□□ -0.85
ABCA4-202ENST00000460514 EIF2S2P20042 333 aaKnown RBP9.73□□□□□ -0.85
ABCA4-202ENST00000460514 TXNRD1Q16881 649 aa9.73□□□□□ -0.85
ABCA4-202ENST00000460514 KRT24Q2M2I5 525 aa9.73□□□□□ -0.85
ABCA4-202ENST00000460514 ALDH1L2Q3SY69 923 aa9.73□□□□□ -0.85
ABCA4-202ENST00000460514 DNAJC10Q8IXB1 793 aa9.73□□□□□ -0.85
ABCA4-202ENST00000460514 TSPYL6Q8N831 410 aa9.73□□□□□ -0.85
ABCA4-202ENST00000460514 RC3H1Q5TC82 1133 aaKnown RBP9.72□□□□□ -0.85
ABCA4-202ENST00000460514 PLA2G2EQ9NZK7 142 aa9.72□□□□□ -0.85
ABCA4-202ENST00000460514 DBF4Q9UBU7 674 aaPredicted RBP9.72□□□□□ -0.85
ABCA4-202ENST00000460514 USP16Q9Y5T5 823 aa9.72□□□□□ -0.85
ABCA4-202ENST00000460514 CNTNAP4Q9C0A0 1308 aa9.72□□□□□ -0.85
ABCA4-202ENST00000460514 TJP1Q07157 1748 aa9.71□□□□□ -0.85
ABCA4-202ENST00000460514 CYP19A1P11511 503 aaPredicted RBP9.71□□□□□ -0.86
ABCA4-202ENST00000460514 EN1Q05925 392 aaPredicted RBP9.71□□□□□ -0.86
ABCA4-202ENST00000460514 ITPK1Q13572 414 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.86
ABCA4-202ENST00000460514 SLC4A9Q96Q91 983 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 CAMKK2Q96RR4 588 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 DDX21Q9NR30 783 aaKnown RBP eCLIP9.71□□□□□ -0.86
ABCA4-202ENST00000460514 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 CCDC87Q9NVE4 849 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 HYPKQ9NX55 129 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 RCAN3Q9UKA8 241 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 CACNA1FO60840 1977 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 C5P01031 1676 aa9.71□□□□□ -0.86
ABCA4-202ENST00000460514 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
ABCA4-202ENST00000460514 CRKLP46109 303 aaKnown RBP9.7□□□□□ -0.86
ABCA4-202ENST00000460514 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
ABCA4-202ENST00000460514 ILDR2Q71H61 639 aa9.7□□□□□ -0.86
ABCA4-202ENST00000460514 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
ABCA4-202ENST00000460514 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.7□□□□□ -0.86
ABCA4-202ENST00000460514 NECTIN2Q92692 538 aa9.7□□□□□ -0.86
ABCA4-202ENST00000460514 AK7Q96M32 723 aa9.7□□□□□ -0.86
ABCA4-202ENST00000460514 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
ABCA4-202ENST00000460514 A0A087WZG4 1122 aa9.69□□□□□ -0.86
ABCA4-202ENST00000460514 IPO8O15397 1037 aaKnown RBP9.69□□□□□ -0.86
ABCA4-202ENST00000460514 COL5A3P25940 1745 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-202ENST00000460514 IL6STP40189 918 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-202ENST00000460514 BRPF1P55201 1214 aaPredicted RBP9.69□□□□□ -0.86
ABCA4-202ENST00000460514 EZH2Q15910 746 aaKnown RBP9.69□□□□□ -0.86
ABCA4-202ENST00000460514 NBPF14Q5TI25 921 aa9.69□□□□□ -0.86
ABCA4-202ENST00000460514 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
ABCA4-202ENST00000460514 LINC00116Q8NCU8 138 aa9.69□□□□□ -0.86
ABCA4-202ENST00000460514 LRRC4BQ9NT99 713 aa9.69□□□□□ -0.86
ABCA4-202ENST00000460514 CHPF2Q9P2E5 772 aa9.69□□□□□ -0.86
ABCA4-202ENST00000460514 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
ABCA4-202ENST00000460514 TAF1LQ8IZX4 1826 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 GNPATO15228 680 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 DDX58O95786 925 aaKnown RBP9.68□□□□□ -0.86
ABCA4-202ENST00000460514 A1BGP04217 495 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 MYL6BP14649 208 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 CANXP27824 592 aaKnown RBP9.68□□□□□ -0.86
ABCA4-202ENST00000460514 GSE1Q14687 1217 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 DEFB132Q7Z7B7 95 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 FLAD1Q8NFF5 587 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 SSH1Q8WYL5 1049 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 STK32BQ9NY57 414 aa9.68□□□□□ -0.86
ABCA4-202ENST00000460514 PTPRCP08575 1304 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 RPS6KA4O75676 772 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 MS4A1P11836 297 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 HOXB3P14651 431 aaPredicted RBP9.67□□□□□ -0.86
ABCA4-202ENST00000460514 KCNQ4P56696 695 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
ABCA4-202ENST00000460514 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 INTS5Q6P9B9 1019 aaKnown RBP9.67□□□□□ -0.86
ABCA4-202ENST00000460514 KIF6Q6ZMV9 814 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
ABCA4-202ENST00000460514 ZBTB1Q9Y2K1 713 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
ABCA4-202ENST00000460514 RREB1Q92766 1687 aa9.67□□□□□ -0.86
ABCA4-202ENST00000460514 EP400Q96L91 3159 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 NBPF26B4DH59 902 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 TCERG1O14776 1098 aaKnown RBP9.66□□□□□ -0.86
ABCA4-202ENST00000460514 SSFA2P28290 1259 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 EIF5P55010 431 aaKnown RBP9.66□□□□□ -0.86
ABCA4-202ENST00000460514 FLIIQ13045 1269 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 FKBP5Q13451 457 aaPredicted RBP9.66□□□□□ -0.86
ABCA4-202ENST00000460514 PDIA6Q15084 440 aa9.66□□□□□ -0.86
ABCA4-202ENST00000460514 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms