RNA–Protein interactions for RNA: ENST00000459908.5

ATP11A-208, Transcript of ATPase phospholipid transporting 11A, human

TSL 2

Gene ATP11A, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP11A-208	ENST00000459908	TSPYL6	Q8N831	410 aa		12.84	□□□□□ -0.35
ATP11A-208	ENST00000459908	USP16	Q9Y5T5	823 aa		12.84	□□□□□ -0.35
ATP11A-208	ENST00000459908	GRM8	O00222	908 aa		12.84	□□□□□ -0.35
ATP11A-208	ENST00000459908	BCS1L	Q9Y276	419 aa		12.84	□□□□□ -0.35
ATP11A-208	ENST00000459908	IL1RAPL2	Q9NP60	686 aa		12.84	□□□□□ -0.35
ATP11A-208	ENST00000459908	CCDC24	Q8N4L8	307 aa		12.83	□□□□□ -0.35
ATP11A-208	ENST00000459908	KCNQ3	O43525	872 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	LMBR1L	Q6UX01	489 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	SYNE3	Q6ZMZ3	975 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	CNTROB	Q8N137	903 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	USP19	O94966	1318 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	SSH2	Q76I76	1423 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	GCC1	Q96CN9	775 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	CLEC11A	Q9Y240	323 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	KCNQ2	O43526	872 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	DHX16	O60231	1041 aa	Known RBP	12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	EXOC6B	Q9Y2D4	811 aa		12.83	□□□□□ -0.36
ATP11A-208	ENST00000459908	GIGYF1	O75420	1035 aa	Predicted RBP	12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	USPL1	Q5W0Q7	1092 aa		12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	PHAX	Q9H814	394 aa	Known RBP	12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	VAMP4	O75379	141 aa		12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	IDH1	O75874	414 aa	Known RBP	12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	ZKSCAN1	P17029	563 aa	Predicted RBP	12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	FAM89A	Q96GI7	184 aa		12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	EYA3	Q99504	573 aa		12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	HCLS1	P14317	486 aa	Predicted RBP	12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	TTLL12	Q14166	644 aa	Predicted RBP	12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	ZSCAN25	Q6NSZ9	544 aa		12.82	□□□□□ -0.36
ATP11A-208	ENST00000459908	PSD	A5PKW4	1024 aa	Predicted RBP	12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	TRIM27	P14373	513 aa		12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	NCL	P19338	710 aa	Known RBP	12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	PDE6B	P35913	854 aa		12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	DZIP1	Q86YF9	867 aa	Known RBP	12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	CCAR1	Q8IX12	1150 aa	Known RBP	12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	KIF1BP	Q96EK5	621 aa		12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	ZBTB1	Q9Y2K1	713 aa		12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	TULP1	O00294	542 aa	Predicted RBP	12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	CWF19L2	Q2TBE0	894 aa	Known RBP	12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	SLC27A3	Q5K4L6	730 aa		12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	SLC3A2	P08195	630 aa	Known RBP	12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	OGFOD1	Q8N543	542 aa		12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	TRIM35	Q9UPQ4	493 aa		12.81	□□□□□ -0.36
ATP11A-208	ENST00000459908	RNF20	Q5VTR2	975 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	ADAMTSL3	P82987	1691 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	ZBTB7A	O95365	584 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	IL6ST	P40189	918 aa	Predicted RBP	12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	ANO2	Q9NQ90	1003 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	ERICH2	A1L162	156 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	HSCB	Q8IWL3	235 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	CCDC191	Q8NCU4	936 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	RALYL	Q86SE5	291 aa	Known RBP	12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	SLF2	Q8IX21	1173 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	MARCH10	Q8NA82	808 aa	Predicted RBP	12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	NACAP1	Q9BZK3	213 aa		12.8	□□□□□ -0.36
ATP11A-208	ENST00000459908	REC8	O95072	547 aa		12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	ARHGAP45	Q92619	1136 aa		12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	ERBB4	Q15303	1308 aa		12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	QRICH2	Q9H0J4	1663 aa		12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	AKAP17A	Q02040	695 aa	Known RBP	12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	ALDH1B1	P30837	517 aa		12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	R3HDM1	Q15032	1099 aa	Known RBP	12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	METTL22	Q9BUU2	404 aa	Predicted RBP	12.79	□□□□□ -0.36
ATP11A-208	ENST00000459908	NUTM1	Q86Y26	1132 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	CCDC125	Q86Z20	511 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	HDAC9	Q9UKV0	1011 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	RAB11FIP3	O75154	756 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	LMOD1	P29536	600 aa	Predicted RBP	12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	IK	Q13123	557 aa	Predicted RBP	12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	C2CD5	Q86YS7	1000 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	HIP1	O00291	1037 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	MYO1B	O43795	1136 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	DEFB132	Q7Z7B7	95 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	MRPL50	Q8N5N7	158 aa	Known RBP	12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	WDHD1	O75717	1129 aa	Predicted RBP	12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	TPRN	Q4KMQ1	711 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	CPLX2	Q6PUV4	134 aa	Known RBP	12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	SPON1	Q9HCB6	807 aa		12.78	□□□□□ -0.36
ATP11A-208	ENST00000459908	RIMBP2	O15034	1052 aa		12.77	□□□□□ -0.36
ATP11A-208	ENST00000459908	ARHGAP27	Q6ZUM4	889 aa		12.77	□□□□□ -0.36
ATP11A-208	ENST00000459908	UBR1	Q8IWV7	1749 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	ATP2B2	Q01814	1243 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	ANKRD2	Q9GZV1	360 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	CPD	O75976	1380 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	RPS6KA4	O75676	772 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	TCIRG1	Q13488	830 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	VPS53	Q5VIR6	699 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	LARGE2	Q8N3Y3	721 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	CNKSR1	Q969H4	720 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	NEURL4	Q96JN8	1562 aa		12.77	□□□□□ -0.37
ATP11A-208	ENST00000459908	ADGRB1	O14514	1584 aa		12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	ATG3	Q9NT62	314 aa		12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	PDE8A	O60658	829 aa		12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	LDHC	P07864	332 aa		12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	MMP10	P09238	476 aa		12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	NOL8	Q76FK4	1167 aa	Known RBP	12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	VSIG10	Q8N0Z9	540 aa		12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	GJA3	Q9Y6H8	435 aa		12.76	□□□□□ -0.37
ATP11A-208	ENST00000459908	NFXL1	Q6ZNB6	911 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms