RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, human

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-208	ENST00000459850	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	RPGRIP1L	Q68CZ1	1315 aa		13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	JAKMIP1	Q96N16	626 aa	Known RBP	13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850		A0A087WZG4	1122 aa		13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	USO1	O60763	962 aa	Known RBP	13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.91	□□□□□ -0.18	1e-6	■■■□□ 14.8
ABCA2-208	ENST00000459850	ANAPC4	Q9UJX5	808 aa		13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	TOPBP1	Q92547	1522 aa		13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	CTTNBP2	Q8WZ74	1663 aa		13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	PHACTR2	O75167	634 aa		13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	NAPB	Q9H115	298 aa		13.91	□□□□□ -0.18
ABCA2-208	ENST00000459850	PAFAH1B1	P43034	410 aa		13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	FILIP1	Q7Z7B0	1213 aa		13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	C6orf229	H3BNL8	230 aa		13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	RBM25	P49756	843 aa	Known RBP	13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	KMT5B	Q4FZB7	885 aa		13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	MICALCL	Q6ZW33	695 aa		13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	GBP3	Q9H0R5	595 aa		13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	NOC2L	Q9Y3T9	749 aa	Known RBP	13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	PFDN4	Q9NQP4	134 aa		13.9	□□□□□ -0.18
ABCA2-208	ENST00000459850	STX6	O43752	255 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	IQCA1	Q86XH1	822 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCDC82	Q8N4S0	544 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	CALML4	Q96GE6	196 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	EPRS	P07814	1512 aa	Known RBP	13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	CTCFL	Q8NI51	663 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	ADAMTS2	O95450	1211 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	GAS8	O95995	478 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	TBC1D5	Q92609	795 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	TMX1	Q9H3N1	280 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	ANKRD30B	Q9BXX2	1392 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	FAM212A	Q96EL1	285 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	VAT1L	Q9HCJ6	419 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	XPC	Q01831	940 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	KIF5A	Q12840	1032 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCDC14	Q49A88	953 aa		13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	MKRN1	Q9UHC7	482 aa	Known RBP	13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	NAA15	Q9BXJ9	866 aa	Known RBP	13.89	□□□□□ -0.19
ABCA2-208	ENST00000459850	SNAPC4	Q5SXM2	1469 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	AKNA	Q7Z591	1439 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	SPECC1L	Q69YQ0	1117 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	AKAP2	Q9Y2D5	859 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	GMNN	O75496	209 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	EPSTI1	Q96J88	318 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	NUP62CL	Q9H1M0	184 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	BIVM-ERCC5	R4GMW8	1640 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	IQGAP2	Q13576	1575 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	NOL3	O60936	208 aa	Known RBP	13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	TMOD3	Q9NYL9	352 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	CUL4B	Q13620	913 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	KCNH5	Q8NCM2	988 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	NSD3	Q9BZ95	1437 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	DAPK1	P53355	1430 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCDC89	Q8N998	374 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	FBF1	Q8TES7	1133 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	CABP5	Q9NP86	173 aa		13.88	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCDC196	A0A1B0GTZ2	297 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	TERF1	P54274	439 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	ZBTB16	Q05516	673 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	UBXN4	Q92575	508 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	TTC12	Q9H892	705 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	CRCP	O75575	148 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	FCHSD2	O94868	740 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	RSPH3	Q86UC2	560 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	CAST	P20810	708 aa	Known RBP	13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	MTIF2	P46199	727 aa	Known RBP	13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	PPP6R1	Q9UPN7	881 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850		U3KPZ7	1027 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	IFIT1	P09914	478 aa	Known RBP	13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	GEN1	Q17RS7	908 aa		13.87	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCDC6	Q16204	474 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	CAMK4	Q16566	473 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	CATIP	Q7Z7H3	387 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	FAM135A	Q9P2D6	1515 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	KIF4B	Q2VIQ3	1234 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	CACYBP	Q9HB71	228 aa	Known RBP	13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	NFE2L2	Q16236	605 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	KIF4A	O95239	1232 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCT6B	Q92526	530 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	TXNDC16	Q9P2K2	825 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	HLA-DOA	P06340	250 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCDC40	Q4G0X9	1142 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	PHAX	Q9H814	394 aa	Known RBP	13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	EP400NL	Q6ZTU2	488 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	MAATS1	Q7Z4T9	603 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	DDX12P	Q92771	950 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	BEGAIN	Q9BUH8	593 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	RAB11FIP3	O75154	756 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	GSTA5	Q7RTV2	222 aa		13.86	□□□□□ -0.19
ABCA2-208	ENST00000459850	KIF14	Q15058	1648 aa		13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	TRO	Q12816	1431 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	ARAP1	Q96P48	1450 aa		13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	RIOK3	O14730	519 aa	Known RBP	13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	SSRP1	Q08945	709 aa	Known RBP	13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	IL1RAPL2	Q9NP60	686 aa		13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	SLC12A7	Q9Y666	1083 aa		13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	CCDC194	A0A1B0GVG4	234 aa		13.85	□□□□□ -0.19
ABCA2-208	ENST00000459850	AMPD3	Q01432	767 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms