RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 ABCA3Q99758 1704 aa24.69■■□□□ 1.54
PDCD2-204ENST00000453163 LARP1Q6PKG0 1096 aaKnown RBP24.69■■□□□ 1.54
PDCD2-204ENST00000453163 FMNL2Q96PY5 1086 aa24.69■■□□□ 1.54
PDCD2-204ENST00000453163 LRP10Q7Z4F1 713 aa24.68■■□□□ 1.54
PDCD2-204ENST00000453163 PALD1Q9ULE6 856 aa24.68■■□□□ 1.54
PDCD2-204ENST00000453163 HDAC5Q9UQL6 1122 aa24.68■■□□□ 1.54
PDCD2-204ENST00000453163 TOM1L2Q6ZVM7 507 aa24.68■■□□□ 1.54
PDCD2-204ENST00000453163 COL5A2P05997 1499 aaPredicted RBP24.67■■□□□ 1.54
PDCD2-204ENST00000453163 DDX11L8A8MPP1 907 aa24.67■■□□□ 1.54
PDCD2-204ENST00000453163 NEURL1BA8MQ27 555 aa24.67■■□□□ 1.54
PDCD2-204ENST00000453163 LAMB4A4D0S4 1761 aa24.66■■□□□ 1.54
PDCD2-204ENST00000453163 MYD88Q99836 296 aa24.66■■□□□ 1.54
PDCD2-204ENST00000453163 TRAK2O60296 914 aa24.66■■□□□ 1.54
PDCD2-204ENST00000453163 NEXNQ0ZGT2 675 aa24.66■■□□□ 1.54
PDCD2-204ENST00000453163 CLASRPQ8N2M8 674 aaKnown RBP24.66■■□□□ 1.54
PDCD2-204ENST00000453163 USP42Q9H9J4 1324 aaKnown RBP24.65■■□□□ 1.54
PDCD2-204ENST00000453163 SSFA2P28290 1259 aa24.65■■□□□ 1.54
PDCD2-204ENST00000453163 AFDNP55196 1824 aaKnown RBP24.65■■□□□ 1.54
PDCD2-204ENST00000453163 KDM4FA0A1W2PPD8 638 aa24.65■■□□□ 1.54
PDCD2-204ENST00000453163 L1TD1Q5T7N2 865 aaKnown RBP24.65■■□□□ 1.54
PDCD2-204ENST00000453163 METTL22Q9BUU2 404 aaPredicted RBP24.65■■□□□ 1.54
PDCD2-204ENST00000453163 ARFGEF2Q9Y6D5 1785 aa24.64■■□□□ 1.54
PDCD2-204ENST00000453163 MCCP23508 829 aa24.64■■□□□ 1.54
PDCD2-204ENST00000453163 GCKRQ14397 625 aa24.64■■□□□ 1.53
PDCD2-204ENST00000453163 CNTROBQ8N137 903 aa24.64■■□□□ 1.53
PDCD2-204ENST00000453163 GBP4Q96PP9 640 aa24.64■■□□□ 1.53
PDCD2-204ENST00000453163 TTC41PQ6P2S7 1318 aa24.63■■□□□ 1.53
PDCD2-204ENST00000453163 NEK4P51957 841 aa24.63■■□□□ 1.53
PDCD2-204ENST00000453163 ANKRD13DQ6ZTN6 518 aa24.63■■□□□ 1.53
PDCD2-204ENST00000453163 ERC1Q8IUD2 1116 aa24.63■■□□□ 1.53
PDCD2-204ENST00000453163 PCDH11XQ9BZA7 1347 aa24.63■■□□□ 1.53
PDCD2-204ENST00000453163 PCDH11YQ9BZA8 1340 aa24.63■■□□□ 1.53
PDCD2-204ENST00000453163 GZF1Q9H116 711 aaPredicted RBP24.63■■□□□ 1.53
PDCD2-204ENST00000453163 ZCRB1Q8TBF4 217 aaKnown RBP24.62■■□□□ 1.53
PDCD2-204ENST00000453163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.62■■□□□ 1.53
PDCD2-204ENST00000453163 GLRX3O76003 335 aaKnown RBP24.61■■□□□ 1.53
PDCD2-204ENST00000453163 SHANK3Q9BYB0 1731 aa24.6■■□□□ 1.53
PDCD2-204ENST00000453163 SASH1O94885 1247 aa24.6■■□□□ 1.53
PDCD2-204ENST00000453163 ZGPATQ8N5A5 531 aaKnown RBP24.6■■□□□ 1.53
PDCD2-204ENST00000453163 IFIT2P09913 472 aaKnown RBP24.6■■□□□ 1.53
PDCD2-204ENST00000453163 ANAPC15P60006 121 aa24.6■■□□□ 1.53
PDCD2-204ENST00000453163 EPHA10Q5JZY3 1008 aa24.6■■□□□ 1.53
PDCD2-204ENST00000453163 AACSQ86V21 672 aa24.59■■□□□ 1.53
PDCD2-204ENST00000453163 SIL1Q9H173 461 aa24.59■■□□□ 1.53
PDCD2-204ENST00000453163 ECHDC1Q9NTX5 307 aa24.59■■□□□ 1.53
PDCD2-204ENST00000453163 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
PDCD2-204ENST00000453163 SGSM2O43147 1006 aa24.59■■□□□ 1.53
PDCD2-204ENST00000453163 KLHDC4Q8TBB5 520 aa24.59■■□□□ 1.53
PDCD2-204ENST00000453163 JARID2Q92833 1246 aaPredicted RBP24.59■■□□□ 1.53
PDCD2-204ENST00000453163 STRN4Q9NRL3 753 aa24.58■■□□□ 1.53
PDCD2-204ENST00000453163 G3BP1Q13283 466 aaKnown RBP eCLIP24.58■■□□□ 1.53
PDCD2-204ENST00000453163 PKP1Q13835 747 aa24.57■■□□□ 1.52
PDCD2-204ENST00000453163 IL2RBP14784 551 aa24.57■■□□□ 1.52
PDCD2-204ENST00000453163 CWC27Q6UX04 472 aaKnown RBP24.57■■□□□ 1.52
PDCD2-204ENST00000453163 GPATCH3Q96I76 525 aa24.57■■□□□ 1.52
PDCD2-204ENST00000453163 HSPA4P34932 840 aa24.56■■□□□ 1.52
PDCD2-204ENST00000453163 EAF2Q96CJ1 260 aaPredicted RBP24.56■■□□□ 1.52
PDCD2-204ENST00000453163 CARD10Q9BWT7 1032 aa24.56■■□□□ 1.52
PDCD2-204ENST00000453163 RAD50Q92878 1312 aa24.56■■□□□ 1.52
PDCD2-204ENST00000453163 NHSL1Q5SYE7 1610 aa24.56■■□□□ 1.52
PDCD2-204ENST00000453163 ATP5J2-PTCD1G3V325 749 aa24.56■■□□□ 1.52
PDCD2-204ENST00000453163 PTCD1O75127 700 aaKnown RBP24.56■■□□□ 1.52
PDCD2-204ENST00000453163 TMX3Q96JJ7 454 aa24.56■■□□□ 1.52
PDCD2-204ENST00000453163 EPB41L2O43491 1005 aaKnown RBP24.55■■□□□ 1.52
PDCD2-204ENST00000453163 PAPPAQ13219 1627 aa24.55■■□□□ 1.52
PDCD2-204ENST00000453163 IL17RAQ96F46 866 aa24.55■■□□□ 1.52
PDCD2-204ENST00000453163 UPF3BQ9BZI7 483 aaKnown RBP24.55■■□□□ 1.52
PDCD2-204ENST00000453163 DDX54Q8TDD1 881 aaKnown RBP24.55■■□□□ 1.52
PDCD2-204ENST00000453163 KCPQ6ZWJ8 1503 aa24.54■■□□□ 1.52
PDCD2-204ENST00000453163 NBPF26B4DH59 902 aa24.54■■□□□ 1.52
PDCD2-204ENST00000453163 CYP2E1P05181 493 aaPredicted RBP24.54■■□□□ 1.52
PDCD2-204ENST00000453163 NBPF14Q5TI25 921 aa24.54■■□□□ 1.52
PDCD2-204ENST00000453163 NBPF10Q6P3W6 841 aaKnown RBP24.54■■□□□ 1.52
PDCD2-204ENST00000453163 UBE3BQ7Z3V4 1068 aa24.54■■□□□ 1.52
PDCD2-204ENST00000453163 NBPF15Q8N660 670 aa24.54■■□□□ 1.52
PDCD2-204ENST00000453163 CCDC8Q9H0W5 538 aaPredicted RBP24.54■■□□□ 1.52
PDCD2-204ENST00000453163 CWC22Q9HCG8 908 aaKnown RBP24.54■■□□□ 1.52
PDCD2-204ENST00000453163 TLR7Q9NYK1 1049 aaKnown RBP24.54■■□□□ 1.52
PDCD2-204ENST00000453163 ERVV-2B6SEH9 535 aa24.54■■□□□ 1.52
PDCD2-204ENST00000453163 NUCB2P80303 420 aa24.54■■□□□ 1.52
PDCD2-204ENST00000453163 LSG1Q9H089 658 aaKnown RBP24.54■■□□□ 1.52
PDCD2-204ENST00000453163 RRAGDQ9NQL2 400 aaPredicted RBP24.54■■□□□ 1.52
PDCD2-204ENST00000453163 NOL8Q76FK4 1167 aaKnown RBP24.53■■□□□ 1.52
PDCD2-204ENST00000453163 FSD2A1L4K1 749 aa24.53■■□□□ 1.52
PDCD2-204ENST00000453163 BAG4O95429 457 aaKnown RBP24.53■■□□□ 1.52
PDCD2-204ENST00000453163 CLEC17AQ6ZS10 378 aa24.53■■□□□ 1.52
PDCD2-204ENST00000453163 MCM2P49736 904 aa24.52■■□□□ 1.52
PDCD2-204ENST00000453163 PLBD2Q8NHP8 589 aa24.52■■□□□ 1.52
PDCD2-204ENST00000453163 DIAPH3Q9NSV4 1193 aa24.52■■□□□ 1.52
PDCD2-204ENST00000453163 NKX1-1Q15270 411 aaPredicted RBP24.52■■□□□ 1.52
PDCD2-204ENST00000453163 ARXQ96QS3 562 aa24.52■■□□□ 1.52
PDCD2-204ENST00000453163 NUP188Q5SRE5 1749 aa24.51■■□□□ 1.51
PDCD2-204ENST00000453163 TOGARAM1Q9Y4F4 1720 aa24.51■■□□□ 1.51
PDCD2-204ENST00000453163 EVA1CP58658 441 aa24.51■■□□□ 1.51
PDCD2-204ENST00000453163 A0A087WZG4 1122 aa24.5■■□□□ 1.51
PDCD2-204ENST00000453163 ERBB4Q15303 1308 aa24.5■■□□□ 1.51
PDCD2-204ENST00000453163 TTLL7Q6ZT98 887 aa24.49■■□□□ 1.51
PDCD2-204ENST00000453163 KIAA1211Q6ZU35 1233 aa24.49■■□□□ 1.51
PDCD2-204ENST00000453163 EVI5LQ96CN4 794 aa24.49■■□□□ 1.51
PDCD2-204ENST00000453163 A1BGP04217 495 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms