RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 GYS1P13807 737 aa18.7■□□□□ 0.58
TRAPPC12-211ENST00000452495 USPL1Q5W0Q7 1092 aa18.7■□□□□ 0.58
TRAPPC12-211ENST00000452495 SRP68Q9UHB9 627 aaKnown RBP18.7■□□□□ 0.58
TRAPPC12-211ENST00000452495 TBC1D2BQ9UPU7 963 aa18.7■□□□□ 0.58
TRAPPC12-211ENST00000452495 ZNF652Q9Y2D9 606 aa18.7■□□□□ 0.58
TRAPPC12-211ENST00000452495 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
TRAPPC12-211ENST00000452495 ATP10DQ9P241 1426 aa18.69■□□□□ 0.58
TRAPPC12-211ENST00000452495 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
TRAPPC12-211ENST00000452495 ZBTB7AO95365 584 aa18.69■□□□□ 0.58
TRAPPC12-211ENST00000452495 ALDH1L2Q3SY69 923 aa18.69■□□□□ 0.58
TRAPPC12-211ENST00000452495 NLGN1Q8N2Q7 840 aa18.69■□□□□ 0.58
TRAPPC12-211ENST00000452495 XAGE3Q8WTP9 111 aa18.69■□□□□ 0.58
TRAPPC12-211ENST00000452495 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
TRAPPC12-211ENST00000452495 COPS6Q7L5N1 327 aa18.68■□□□□ 0.58
TRAPPC12-211ENST00000452495 ARXQ96QS3 562 aa18.68■□□□□ 0.58
TRAPPC12-211ENST00000452495 SLC4A2P04920 1241 aa18.67■□□□□ 0.58
TRAPPC12-211ENST00000452495 TTLL7Q6ZT98 887 aa18.67■□□□□ 0.58
TRAPPC12-211ENST00000452495 BCL2L12Q9HB09 334 aa18.67■□□□□ 0.58
TRAPPC12-211ENST00000452495 SPON1Q9HCB6 807 aa18.67■□□□□ 0.58
TRAPPC12-211ENST00000452495 TCERG1O14776 1098 aaKnown RBP18.66■□□□□ 0.58
TRAPPC12-211ENST00000452495 DDX58O95786 925 aaKnown RBP18.66■□□□□ 0.58
TRAPPC12-211ENST00000452495 PLBD2Q8NHP8 589 aa18.66■□□□□ 0.58
TRAPPC12-211ENST00000452495 LAMB2P55268 1798 aa18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 POLD1P28340 1107 aa18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 FLIIQ13045 1269 aa18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 FKBP8Q14318 412 aa18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 MSL1Q68DK7 614 aa18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 ZBTB3Q9H5J0 574 aa18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 PHAXQ9H814 394 aaKnown RBP18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 CARMIL3Q8ND23 1372 aa18.65■□□□□ 0.58
TRAPPC12-211ENST00000452495 GIGYF2Q6Y7W6 1299 aaKnown RBP18.64■□□□□ 0.57
TRAPPC12-211ENST00000452495 SSH1Q8WYL5 1049 aa18.64■□□□□ 0.57
TRAPPC12-211ENST00000452495 SGIP1Q9BQI5 828 aa18.64■□□□□ 0.57
TRAPPC12-211ENST00000452495 SMC4Q9NTJ3 1288 aa18.64■□□□□ 0.57
TRAPPC12-211ENST00000452495 RARSP54136 660 aaKnown RBP18.63■□□□□ 0.57
TRAPPC12-211ENST00000452495 HSP90AB3PQ58FF7 597 aa18.63■□□□□ 0.57
TRAPPC12-211ENST00000452495 ANKRD13DQ6ZTN6 518 aa18.63■□□□□ 0.57
TRAPPC12-211ENST00000452495 MRPL50Q8N5N7 158 aaKnown RBP18.63■□□□□ 0.57
TRAPPC12-211ENST00000452495 ATF5Q9Y2D1 282 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC12-211ENST00000452495 ADCY9O60503 1353 aa18.63■□□□□ 0.57
TRAPPC12-211ENST00000452495 PXDNLA1KZ92 1463 aa18.63■□□□□ 0.57
TRAPPC12-211ENST00000452495 MMP10P09238 476 aa18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 PTGER2P43116 358 aa18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 BRPF1P55201 1214 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 HLFQ16534 295 aa18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 G2E3Q7L622 706 aa18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 PTPRCP08575 1304 aa18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 KIF16BQ96L93 1317 aa18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 IBTKQ9P2D0 1353 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 ANKRD31Q8N7Z5 1873 aa18.62■□□□□ 0.57
TRAPPC12-211ENST00000452495 TM4SF1P30408 202 aa18.61■□□□□ 0.57
TRAPPC12-211ENST00000452495 FKBP5Q13451 457 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC12-211ENST00000452495 NFIXQ14938 502 aa18.61■□□□□ 0.57
TRAPPC12-211ENST00000452495 TBC1D9BQ66K14 1250 aa18.61■□□□□ 0.57
TRAPPC12-211ENST00000452495 RIC3Q7Z5B4 369 aa18.61■□□□□ 0.57
TRAPPC12-211ENST00000452495 DLEC1Q9Y238 1755 aa18.6■□□□□ 0.57
TRAPPC12-211ENST00000452495 KSR2Q6VAB6 950 aa18.6■□□□□ 0.57
TRAPPC12-211ENST00000452495 BCL2L13Q9BXK5 485 aa18.6■□□□□ 0.57
TRAPPC12-211ENST00000452495 PARP3Q9Y6F1 533 aa18.6■□□□□ 0.57
TRAPPC12-211ENST00000452495 KIAA1551Q9HCM1 1747 aa18.6■□□□□ 0.57
TRAPPC12-211ENST00000452495 C10orf71Q711Q0 1435 aa18.59■□□□□ 0.57
TRAPPC12-211ENST00000452495 POLRMTO00411 1230 aaKnown RBP18.59■□□□□ 0.57
TRAPPC12-211ENST00000452495 DDR1Q08345 913 aa18.59■□□□□ 0.57
TRAPPC12-211ENST00000452495 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
TRAPPC12-211ENST00000452495 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
TRAPPC12-211ENST00000452495 NIP7Q9Y221 180 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRAPPC12-211ENST00000452495 MYH3P11055 1940 aa18.59■□□□□ 0.57
TRAPPC12-211ENST00000452495 DDX60Q8IY21 1712 aaKnown RBP18.58■□□□□ 0.57
TRAPPC12-211ENST00000452495 PI4KAP2A4QPH2 592 aa18.58■□□□□ 0.56
TRAPPC12-211ENST00000452495 TCIRG1Q13488 830 aa18.58■□□□□ 0.56
TRAPPC12-211ENST00000452495 PARP10Q53GL7 1025 aa18.58■□□□□ 0.56
TRAPPC12-211ENST00000452495 ZNF34Q8IZ26 560 aa18.58■□□□□ 0.56
TRAPPC12-211ENST00000452495 PI4KAP1Q8N8J0 262 aa18.58■□□□□ 0.56
TRAPPC12-211ENST00000452495 MAP3K2Q9Y2U5 619 aa18.58■□□□□ 0.56
TRAPPC12-211ENST00000452495 BICDL1Q6ZP65 573 aa18.57■□□□□ 0.56
TRAPPC12-211ENST00000452495 METTL22Q9BUU2 404 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC12-211ENST00000452495 BRCA1P38398 1863 aaKnown RBP18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 RNF123Q5XPI4 1314 aa18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 UBN2Q6ZU65 1347 aa18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 TNRC6CQ9HCJ0 1690 aaKnown RBP18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 RIC1Q4ADV7 1423 aa18.56■□□□□ 0.56
TRAPPC12-211ENST00000452495 COL11A2P13942 1736 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC12-211ENST00000452495 GPTP24298 496 aa18.55■□□□□ 0.56
TRAPPC12-211ENST00000452495 ISCA1Q9BUE6 129 aa18.55■□□□□ 0.56
TRAPPC12-211ENST00000452495 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
TRAPPC12-211ENST00000452495 SERPINB2P05120 415 aa18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 TRIM28Q13263 835 aaKnown RBP18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 NBPF5PQ86XG9 351 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 CNBD1Q8NA66 436 aa18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 ARHGAP45Q92619 1136 aa18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 MYD88Q99836 296 aa18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 API5Q9BZZ5 524 aaKnown RBP18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 PPP1R1BQ9UD71 204 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 RCAN3Q9UKA8 241 aa18.54■□□□□ 0.56
TRAPPC12-211ENST00000452495 IPO8O15397 1037 aaKnown RBP18.53■□□□□ 0.56
TRAPPC12-211ENST00000452495 PPP1R42Q7Z4L9 355 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms