RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
CHD3-206ENST00000452447 CEP350Q5VT06 3117 aa16.93■□□□□ 0.3
CHD3-206ENST00000452447 RGL2O15211 777 aa16.93■□□□□ 0.3
CHD3-206ENST00000452447 NEUROD2Q15784 382 aa16.93■□□□□ 0.3
CHD3-206ENST00000452447 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
CHD3-206ENST00000452447 NIP7Q9Y221 180 aaKnown RBP eCLIP16.93■□□□□ 0.3
CHD3-206ENST00000452447 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
CHD3-206ENST00000452447 TPTE2Q6XPS3 522 aa16.92■□□□□ 0.3
CHD3-206ENST00000452447 PRKRIP1Q9H875 184 aaPredicted RBP16.92■□□□□ 0.3
CHD3-206ENST00000452447 MYL6BP14649 208 aa16.91■□□□□ 0.3
CHD3-206ENST00000452447 RUNDC1Q96C34 613 aa16.91■□□□□ 0.3
CHD3-206ENST00000452447 CCDC88AQ3V6T2 1871 aa16.91■□□□□ 0.3
CHD3-206ENST00000452447 KIF3CO14782 793 aa16.9■□□□□ 0.3
CHD3-206ENST00000452447 RASSF7Q02833 373 aa16.9■□□□□ 0.3
CHD3-206ENST00000452447 HLFQ16534 295 aa16.9■□□□□ 0.3
CHD3-206ENST00000452447 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
CHD3-206ENST00000452447 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
CHD3-206ENST00000452447 LMNB1P20700 586 aa16.89■□□□□ 0.3
CHD3-206ENST00000452447 CNKSR1Q969H4 720 aa16.89■□□□□ 0.3
CHD3-206ENST00000452447 COL11A2P13942 1736 aaPredicted RBP16.89■□□□□ 0.29
CHD3-206ENST00000452447 KDM2BQ8NHM5 1336 aa16.89■□□□□ 0.29
CHD3-206ENST00000452447 NUP98P52948 1817 aa16.89■□□□□ 0.29
CHD3-206ENST00000452447 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
CHD3-206ENST00000452447 ERVV-1B6SEH8 477 aa16.89■□□□□ 0.29
CHD3-206ENST00000452447 SRGNP10124 158 aa16.89■□□□□ 0.29
CHD3-206ENST00000452447 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
CHD3-206ENST00000452447 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
CHD3-206ENST00000452447 STYK1Q6J9G0 422 aa16.89■□□□□ 0.29
CHD3-206ENST00000452447 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
CHD3-206ENST00000452447 ADAMTS8Q9UP79 889 aa16.89■□□□□ 0.29
CHD3-206ENST00000452447 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
CHD3-206ENST00000452447 MAP3K15Q6ZN16 1313 aa16.88■□□□□ 0.29
CHD3-206ENST00000452447 C21orf2O43822 256 aa16.88■□□□□ 0.29
CHD3-206ENST00000452447 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
CHD3-206ENST00000452447 MASTLQ96GX5 879 aa16.88■□□□□ 0.29
CHD3-206ENST00000452447 NMRK2Q9NPI5 230 aa16.88■□□□□ 0.29
CHD3-206ENST00000452447 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
CHD3-206ENST00000452447 SLX4Q8IY92 1834 aa16.86■□□□□ 0.29
CHD3-206ENST00000452447 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
CHD3-206ENST00000452447 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
CHD3-206ENST00000452447 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
CHD3-206ENST00000452447 NFKBIEO00221 500 aa16.85■□□□□ 0.29
CHD3-206ENST00000452447 TOMM70O94826 608 aa16.85■□□□□ 0.29
CHD3-206ENST00000452447 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
CHD3-206ENST00000452447 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
CHD3-206ENST00000452447 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
CHD3-206ENST00000452447 NPR1P16066 1061 aa16.85■□□□□ 0.29
CHD3-206ENST00000452447 SOGA3Q5TF21 947 aa16.85■□□□□ 0.29
CHD3-206ENST00000452447 PRPF40BQ6NWY9 871 aaKnown RBP16.85■□□□□ 0.29
CHD3-206ENST00000452447 TRIM35Q9UPQ4 493 aa16.85■□□□□ 0.29
CHD3-206ENST00000452447 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
CHD3-206ENST00000452447 HSPA6P17066 643 aa16.84■□□□□ 0.29
CHD3-206ENST00000452447 KLRG2A4D1S0 409 aaPredicted RBP16.83■□□□□ 0.28
CHD3-206ENST00000452447 CHL1O00533 1208 aa16.83■□□□□ 0.28
CHD3-206ENST00000452447 GPTP24298 496 aa16.83■□□□□ 0.28
CHD3-206ENST00000452447 TAOK3Q9H2K8 898 aa16.83■□□□□ 0.28
CHD3-206ENST00000452447 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
CHD3-206ENST00000452447 PRELPP51888 382 aa16.82■□□□□ 0.28
CHD3-206ENST00000452447 PDIA6Q15084 440 aa16.82■□□□□ 0.28
CHD3-206ENST00000452447 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
CHD3-206ENST00000452447 RRAGCQ9HB90 399 aa16.82■□□□□ 0.28
CHD3-206ENST00000452447 DICER1Q9UPY3 1922 aaKnown RBP16.81■□□□□ 0.28
CHD3-206ENST00000452447 ALDH1B1P30837 517 aa16.81■□□□□ 0.28
CHD3-206ENST00000452447 NUTM1Q86Y26 1132 aa16.81■□□□□ 0.28
CHD3-206ENST00000452447 NECTIN2Q92692 538 aa16.81■□□□□ 0.28
CHD3-206ENST00000452447 TIAM2Q8IVF5 1701 aa16.81■□□□□ 0.28
CHD3-206ENST00000452447 GLTPD2A6NH11 291 aa16.81■□□□□ 0.28
CHD3-206ENST00000452447 ANXA1P04083 346 aa16.81■□□□□ 0.28
CHD3-206ENST00000452447 ERFEQ4G0M1 354 aa16.81■□□□□ 0.28
CHD3-206ENST00000452447 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
CHD3-206ENST00000452447 LTBP3Q9NS15 1303 aa16.8■□□□□ 0.28
CHD3-206ENST00000452447 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
CHD3-206ENST00000452447 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
CHD3-206ENST00000452447 LRP10Q7Z4F1 713 aa16.8■□□□□ 0.28
CHD3-206ENST00000452447 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
CHD3-206ENST00000452447 UBN2Q6ZU65 1347 aa16.79■□□□□ 0.28
CHD3-206ENST00000452447 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
CHD3-206ENST00000452447 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
CHD3-206ENST00000452447 PARP10Q53GL7 1025 aa16.79■□□□□ 0.28
CHD3-206ENST00000452447 CCDC93Q567U6 631 aa16.79■□□□□ 0.28
CHD3-206ENST00000452447 SUSD4Q5VX71 490 aa16.79■□□□□ 0.28
CHD3-206ENST00000452447 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
CHD3-206ENST00000452447 RBM46Q8TBY0 533 aaKnown RBP16.79■□□□□ 0.28
CHD3-206ENST00000452447 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
CHD3-206ENST00000452447 IBTKQ9P2D0 1353 aaPredicted RBP16.78■□□□□ 0.28
CHD3-206ENST00000452447 APAF1O14727 1248 aa16.78■□□□□ 0.28
CHD3-206ENST00000452447 COPS6Q7L5N1 327 aa16.78■□□□□ 0.28
CHD3-206ENST00000452447 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
CHD3-206ENST00000452447 ABCC12Q96J65 1359 aa16.78■□□□□ 0.28
CHD3-206ENST00000452447 VEGFAP15692 232 aaPredicted RBP16.77■□□□□ 0.28
CHD3-206ENST00000452447 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.28
CHD3-206ENST00000452447 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
CHD3-206ENST00000452447 HSP90AB3PQ58FF7 597 aa16.77■□□□□ 0.28
CHD3-206ENST00000452447 XAGE3Q8WTP9 111 aa16.77■□□□□ 0.28
CHD3-206ENST00000452447 RPGRQ92834 1020 aaKnown RBP16.77■□□□□ 0.28
CHD3-206ENST00000452447 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHD3-206ENST00000452447 HDGFL1Q5TGJ6 251 aa16.77■□□□□ 0.27
CHD3-206ENST00000452447 HOXB7P09629 217 aa16.76■□□□□ 0.27
CHD3-206ENST00000452447 RTKN2Q8IZC4 609 aa16.76■□□□□ 0.27
CHD3-206ENST00000452447 UTP14AQ9BVJ6 771 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms