RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TOMM22Q9NS69 142 aa2.55□□□□□ -2
USP53-202ENST00000450251 DNAI1Q9UI46 699 aa2.55□□□□□ -2
USP53-202ENST00000450251 DAAM1Q9Y4D1 1078 aa2.55□□□□□ -2
USP53-202ENST00000450251 MORC2Q9Y6X9 1032 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 CASKIN1Q8WXD9 1431 aa2.55□□□□□ -2
USP53-202ENST00000450251 RIOK3O14730 519 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 EPB41L2O43491 1005 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 DNAJC8O75937 253 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 CCDC175P0C221 793 aa2.55□□□□□ -2
USP53-202ENST00000450251 U2AF2P26368 475 aaKnown RBP eCLIP2.55□□□□□ -23e-7■□□□□ 9.3
USP53-202ENST00000450251 APBA1Q02410 837 aa2.55□□□□□ -2
USP53-202ENST00000450251 AIMP1Q12904 312 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 SNCBQ16143 134 aa2.55□□□□□ -2
USP53-202ENST00000450251 LRRFIP1Q32MZ4 808 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 C6orf163Q5TEZ5 329 aa2.55□□□□□ -2
USP53-202ENST00000450251 CCDC174Q6PII3 467 aa2.55□□□□□ -2
USP53-202ENST00000450251 GPR161Q8N6U8 529 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 JMYQ8N9B5 988 aa2.55□□□□□ -2
USP53-202ENST00000450251 FAM200AQ8TCP9 573 aa2.55□□□□□ -2
USP53-202ENST00000450251 PNISRQ8TF01 805 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 C16orf45Q96MC5 204 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 SH2B1Q9NRF2 756 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 GCC2Q8IWJ2 1684 aa2.55□□□□□ -2
USP53-202ENST00000450251 CREB3O43889 395 aa2.55□□□□□ -2
USP53-202ENST00000450251 MX1P20591 662 aa2.55□□□□□ -2
USP53-202ENST00000450251 PPP2R5AQ15172 486 aa2.55□□□□□ -2
USP53-202ENST00000450251 IMMTQ16891 758 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 ANKRD45Q5TZF3 282 aa2.55□□□□□ -2
USP53-202ENST00000450251 ARMC9Q7Z3E5 817 aa2.55□□□□□ -2
USP53-202ENST00000450251 MORC1Q86VD1 984 aa2.55□□□□□ -2
USP53-202ENST00000450251 TAX1BP1Q86VP1 789 aa2.55□□□□□ -2
USP53-202ENST00000450251 GDAP1L1Q96MZ0 367 aa2.55□□□□□ -2
USP53-202ENST00000450251 JAKMIP1Q96N16 626 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 CXorf56Q9H5V9 222 aa2.55□□□□□ -2
USP53-202ENST00000450251 CREBZFQ9NS37 354 aa2.55□□□□□ -2
USP53-202ENST00000450251 RRP7BPQ9NSQ0 103 aa2.55□□□□□ -2
USP53-202ENST00000450251 PTPRTO14522 1441 aa2.55□□□□□ -2
USP53-202ENST00000450251 SETD1BQ9UPS6 1966 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 KDM4AO75164 1064 aa2.55□□□□□ -2
USP53-202ENST00000450251 CASTP20810 708 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 ACTN2P35609 894 aa2.55□□□□□ -2
USP53-202ENST00000450251 PRPHP41219 470 aa2.55□□□□□ -2
USP53-202ENST00000450251 ATP11AP98196 1134 aa2.55□□□□□ -2
USP53-202ENST00000450251 DRP2Q13474 957 aa2.55□□□□□ -2
USP53-202ENST00000450251 MCM6Q14566 821 aa2.55□□□□□ -2
USP53-202ENST00000450251 CCDC57Q2TAC2 916 aa2.55□□□□□ -2
USP53-202ENST00000450251 CCDC181Q5TID7 509 aa2.55□□□□□ -2
USP53-202ENST00000450251 CLASRPQ8N2M8 674 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 FBXO18Q8NFZ0 1043 aa2.55□□□□□ -2
USP53-202ENST00000450251 RUNDC1Q96C34 613 aa2.55□□□□□ -2
USP53-202ENST00000450251 TRIM6Q9C030 488 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 TRIM4Q9C037 500 aa2.55□□□□□ -2
USP53-202ENST00000450251 CWC25Q9NXE8 425 aaPredicted RBP2.55□□□□□ -2
USP53-202ENST00000450251 PSD3Q9NYI0 1048 aa2.55□□□□□ -2
USP53-202ENST00000450251 THEGQ9P2T0 379 aa2.55□□□□□ -2
USP53-202ENST00000450251 ABCC11Q96J66 1382 aa2.55□□□□□ -2
USP53-202ENST00000450251 SCAF11Q99590 1463 aaKnown RBP2.55□□□□□ -2
USP53-202ENST00000450251 GOLGA8KD6RF30 607 aa2.54□□□□□ -2
USP53-202ENST00000450251 SRGAP3O43295 1099 aa2.54□□□□□ -2
USP53-202ENST00000450251 TACC1O75410 805 aa2.54□□□□□ -2
USP53-202ENST00000450251 RWDD2BP57060 319 aa2.54□□□□□ -2
USP53-202ENST00000450251 MVPQ14764 893 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 RASEFQ8IZ41 740 aa2.54□□□□□ -2
USP53-202ENST00000450251 CACNA2D3Q8IZS8 1091 aa2.54□□□□□ -2
USP53-202ENST00000450251 ARHGAP18Q8N392 663 aa2.54□□□□□ -2
USP53-202ENST00000450251 ARMC2Q8NEN0 867 aa2.54□□□□□ -2
USP53-202ENST00000450251 RASSF8Q8NHQ8 419 aa2.54□□□□□ -2
USP53-202ENST00000450251 STAG1Q8WVM7 1258 aa2.54□□□□□ -2
USP53-202ENST00000450251 RPGRIP1Q96KN7 1286 aa2.54□□□□□ -2
USP53-202ENST00000450251 CFAP57Q96MR6 1250 aa2.54□□□□□ -2
USP53-202ENST00000450251 UPF3BQ9BZI7 483 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 CHCHD3Q9NX63 227 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 VPS18Q9P253 973 aa2.54□□□□□ -2
USP53-202ENST00000450251 DDX41Q9UJV9 622 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 KDM2BQ8NHM5 1336 aa2.54□□□□□ -2
USP53-202ENST00000450251 KANK1Q14678 1352 aa2.54□□□□□ -2
USP53-202ENST00000450251 PLIN1O60240 522 aa2.54□□□□□ -2
USP53-202ENST00000450251 PPFIA4O75335 1185 aa2.54□□□□□ -2
USP53-202ENST00000450251 YY1P25490 414 aa2.54□□□□□ -2
USP53-202ENST00000450251 OAS2P29728 719 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 BRPF1P55201 1214 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 CCDC152Q4G0S7 254 aa2.54□□□□□ -2
USP53-202ENST00000450251 CCDC129Q6ZRS4 1044 aa2.54□□□□□ -2
USP53-202ENST00000450251 CEP128Q6ZU80 1094 aa2.54□□□□□ -2
USP53-202ENST00000450251 CCDC186Q7Z3E2 898 aa2.54□□□□□ -2
USP53-202ENST00000450251 P3H4Q92791 437 aa2.54□□□□□ -2
USP53-202ENST00000450251 CCDC114Q96M63 670 aa2.54□□□□□ -2
USP53-202ENST00000450251 TTC14Q96N46 770 aa2.54□□□□□ -2
USP53-202ENST00000450251 TRERF1Q96PN7 1200 aa2.54□□□□□ -2
USP53-202ENST00000450251 PUS7Q96PZ0 661 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 MPHOSPH6Q99547 160 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 COG6Q9Y2V7 657 aa2.54□□□□□ -2
USP53-202ENST00000450251 EFCAB8A8MWE9 144 aa2.54□□□□□ -2
USP53-202ENST00000450251 URI1O94763 535 aaPredicted RBP2.54□□□□□ -2
USP53-202ENST00000450251 GCFC2P16383 781 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 BMP2KLQ5H9B9 411 aa2.54□□□□□ -2
USP53-202ENST00000450251 CEP85LQ5SZL2 805 aa2.54□□□□□ -2
USP53-202ENST00000450251 NBPF10Q6P3W6 841 aaKnown RBP2.54□□□□□ -2
USP53-202ENST00000450251 FCHSD1Q86WN1 690 aa2.54□□□□□ -2
USP53-202ENST00000450251 RPAP2Q8IXW5 612 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms