RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 NFKBIEO00221 500 aa18.85■□□□□ 0.61
CDK3-202ENST00000448471 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
CDK3-202ENST00000448471 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
CDK3-202ENST00000448471 H0YIN7 160 aa18.83■□□□□ 0.6
CDK3-202ENST00000448471 IL16Q14005 1332 aa18.83■□□□□ 0.6
CDK3-202ENST00000448471 TRIM35Q9UPQ4 493 aa18.82■□□□□ 0.6
CDK3-202ENST00000448471 POTECB2RU33 542 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
CDK3-202ENST00000448471 BICDL1Q6ZP65 573 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 VSIG10Q8N0Z9 540 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 HMOX1P09601 288 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 RIPK4P57078 832 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 NFE2L2Q16236 605 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 DPY19L2Q6NUT2 758 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 MYH16Q9H6N6 1097 aa18.81■□□□□ 0.6
CDK3-202ENST00000448471 ZNF622Q969S3 477 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDK3-202ENST00000448471 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
CDK3-202ENST00000448471 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
CDK3-202ENST00000448471 CCDC88AQ3V6T2 1871 aa18.78■□□□□ 0.6
CDK3-202ENST00000448471 C21orf2O43822 256 aa18.77■□□□□ 0.6
CDK3-202ENST00000448471 EIF5P55010 431 aaKnown RBP18.77■□□□□ 0.6
CDK3-202ENST00000448471 PHACTR3Q96KR7 559 aa18.77■□□□□ 0.6
CDK3-202ENST00000448471 A0A087WZG4 1122 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 ERFEQ4G0M1 354 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 TBC1D9BQ66K14 1250 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 TTC5Q8N0Z6 440 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
CDK3-202ENST00000448471 UBR2Q8IWV8 1755 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 STARD3NLO95772 234 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 PDE6BP35913 854 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 LMOD3Q0VAK6 560 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 BRIP1Q9BX63 1249 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 PDZRN3Q9UPQ7 1066 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 PCNTO95613 3336 aa18.76■□□□□ 0.59
CDK3-202ENST00000448471 VIRMAQ69YN4 1812 aaKnown RBP18.75■□□□□ 0.59
CDK3-202ENST00000448471 ANKRD31Q8N7Z5 1873 aa18.75■□□□□ 0.59
CDK3-202ENST00000448471 CT47B1P0C2W7 299 aaPredicted RBP18.75■□□□□ 0.59
CDK3-202ENST00000448471 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
CDK3-202ENST00000448471 PRR5LQ6MZQ0 368 aa18.75■□□□□ 0.59
CDK3-202ENST00000448471 CCDC24Q8N4L8 307 aa18.75■□□□□ 0.59
CDK3-202ENST00000448471 CHADLQ6NUI6 762 aa18.74■□□□□ 0.59
CDK3-202ENST00000448471 CREBZFQ9NS37 354 aa18.74■□□□□ 0.59
CDK3-202ENST00000448471 COL11A2P13942 1736 aaPredicted RBP18.74■□□□□ 0.59
CDK3-202ENST00000448471 SCN7AQ01118 1682 aa18.74■□□□□ 0.59
CDK3-202ENST00000448471 MKRN1Q9UHC7 482 aaKnown RBP18.73■□□□□ 0.59
CDK3-202ENST00000448471 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
CDK3-202ENST00000448471 LTBP3Q9NS15 1303 aa18.73■□□□□ 0.59
CDK3-202ENST00000448471 TAOK3Q9H2K8 898 aa18.72■□□□□ 0.59
CDK3-202ENST00000448471 TBC1D2BQ9UPU7 963 aa18.72■□□□□ 0.59
CDK3-202ENST00000448471 FER1L6Q2WGJ9 1857 aa18.72■□□□□ 0.59
CDK3-202ENST00000448471 DDNO94850 711 aaPredicted RBP18.72■□□□□ 0.59
CDK3-202ENST00000448471 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
CDK3-202ENST00000448471 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
CDK3-202ENST00000448471 ZNF496Q96IT1 587 aaPredicted RBP18.72■□□□□ 0.59
CDK3-202ENST00000448471 FANCIQ9NVI1 1328 aa18.71■□□□□ 0.59
CDK3-202ENST00000448471 DICER1Q9UPY3 1922 aaKnown RBP18.71■□□□□ 0.59
CDK3-202ENST00000448471 HEG1Q9ULI3 1381 aa18.71■□□□□ 0.59
CDK3-202ENST00000448471 TEX13AQ9BXU3 409 aaPredicted RBP18.7■□□□□ 0.58
CDK3-202ENST00000448471 PLIN1O60240 522 aa18.69■□□□□ 0.58
CDK3-202ENST00000448471 IL6STP40189 918 aaPredicted RBP18.69■□□□□ 0.58
CDK3-202ENST00000448471 TEFQ10587 303 aa18.69■□□□□ 0.58
CDK3-202ENST00000448471 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
CDK3-202ENST00000448471 CNBD1Q8NA66 436 aa18.69■□□□□ 0.58
CDK3-202ENST00000448471 CNKSR1Q969H4 720 aa18.69■□□□□ 0.58
CDK3-202ENST00000448471 NPHP1O15259 732 aa18.68■□□□□ 0.58
CDK3-202ENST00000448471 RARSP54136 660 aaKnown RBP18.68■□□□□ 0.58
CDK3-202ENST00000448471 ST5P78524 1137 aa18.68■□□□□ 0.58
CDK3-202ENST00000448471 STYK1Q6J9G0 422 aa18.68■□□□□ 0.58
CDK3-202ENST00000448471 PRPF40BQ6NWY9 871 aaKnown RBP18.68■□□□□ 0.58
CDK3-202ENST00000448471 SETDB2Q96T68 719 aa18.68■□□□□ 0.58
CDK3-202ENST00000448471 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
CDK3-202ENST00000448471 CAMTA2O94983 1202 aa18.67■□□□□ 0.58
CDK3-202ENST00000448471 SRGNP10124 158 aa18.67■□□□□ 0.58
CDK3-202ENST00000448471 SOGA3Q5TF21 947 aa18.67■□□□□ 0.58
CDK3-202ENST00000448471 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
CDK3-202ENST00000448471 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
CDK3-202ENST00000448471 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
CDK3-202ENST00000448471 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
CDK3-202ENST00000448471 IQCA1LA6NCM1 817 aa18.66■□□□□ 0.58
CDK3-202ENST00000448471 FOXN1O15353 648 aa18.66■□□□□ 0.58
CDK3-202ENST00000448471 BCAR3O75815 825 aa18.66■□□□□ 0.58
CDK3-202ENST00000448471 A1BGP04217 495 aa18.66■□□□□ 0.58
CDK3-202ENST00000448471 GNAI1P63096 354 aa18.66■□□□□ 0.58
CDK3-202ENST00000448471 MASTLQ96GX5 879 aa18.66■□□□□ 0.58
CDK3-202ENST00000448471 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
CDK3-202ENST00000448471 SLX4Q8IY92 1834 aa18.65■□□□□ 0.58
CDK3-202ENST00000448471 GNAT3A8MTJ3 354 aa18.65■□□□□ 0.58
CDK3-202ENST00000448471 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
CDK3-202ENST00000448471 B4GALNT3Q6L9W6 998 aa18.65■□□□□ 0.58
CDK3-202ENST00000448471 TSR2Q969E8 191 aaKnown RBP18.65■□□□□ 0.58
CDK3-202ENST00000448471 FMNL2Q96PY5 1086 aa18.65■□□□□ 0.58
CDK3-202ENST00000448471 PASKQ96RG2 1323 aa18.65■□□□□ 0.58
CDK3-202ENST00000448471 PDE3AQ14432 1141 aa18.64■□□□□ 0.58
CDK3-202ENST00000448471 LDHDQ86WU2 507 aa18.64■□□□□ 0.58
CDK3-202ENST00000448471 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.58
CDK3-202ENST00000448471 CACNA1SQ13698 1873 aa18.64■□□□□ 0.57
CDK3-202ENST00000448471 ARFGEF2Q9Y6D5 1785 aa18.64■□□□□ 0.57
CDK3-202ENST00000448471 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
CDK3-202ENST00000448471 DZIP3Q86Y13 1208 aaKnown RBP18.64■□□□□ 0.57
CDK3-202ENST00000448471 ZNF428Q96B54 188 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms